RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 CEP89Q96ST8 783 aa20.75■□□□□ 0.91
CACNA1A-240ENST00000637432 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
CACNA1A-240ENST00000637432 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
CACNA1A-240ENST00000637432 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
CACNA1A-240ENST00000637432 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-240ENST00000637432 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
CACNA1A-240ENST00000637432 MEX3CQ5U5Q3 659 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-240ENST00000637432 PES1O00541 588 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-240ENST00000637432 MTUS2Q5JR59 1369 aa20.7■□□□□ 0.9
CACNA1A-240ENST00000637432 FBXW7Q969H0 707 aa20.7■□□□□ 0.9
CACNA1A-240ENST00000637432 TCEAL9Q9UHQ7 104 aa20.7■□□□□ 0.9
CACNA1A-240ENST00000637432 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
CACNA1A-240ENST00000637432 MCCP23508 829 aa20.67■□□□□ 0.9
CACNA1A-240ENST00000637432 KIAA1211Q6ZU35 1233 aa20.67■□□□□ 0.9
CACNA1A-240ENST00000637432 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
CACNA1A-240ENST00000637432 MSNP26038 577 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-240ENST00000637432 CTDP1Q9Y5B0 961 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-240ENST00000637432 HSCBQ8IWL3 235 aa20.59■□□□□ 0.89
CACNA1A-240ENST00000637432 TRIM34Q9BYJ4 488 aa20.59■□□□□ 0.89
CACNA1A-240ENST00000637432 B4GALNT3Q6L9W6 998 aa20.59■□□□□ 0.89
CACNA1A-240ENST00000637432 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
CACNA1A-240ENST00000637432 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
CACNA1A-240ENST00000637432 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
CACNA1A-240ENST00000637432 NOL8Q76FK4 1167 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-240ENST00000637432 PPP1R1BQ9UD71 204 aaPredicted RBP20.55■□□□□ 0.88
CACNA1A-240ENST00000637432 SUPT16HQ9Y5B9 1047 aaKnown RBP20.55■□□□□ 0.88
CACNA1A-240ENST00000637432 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-240ENST00000637432 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
CACNA1A-240ENST00000637432 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.887e-11■■■■■ 260.8
CACNA1A-240ENST00000637432 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
CACNA1A-240ENST00000637432 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
CACNA1A-240ENST00000637432 CDCA8Q53HL2 280 aa20.52■□□□□ 0.88
CACNA1A-240ENST00000637432 EVA1CP58658 441 aa20.52■□□□□ 0.88
CACNA1A-240ENST00000637432 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.88
CACNA1A-240ENST00000637432 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-240ENST00000637432 TNNT3P45378 269 aaPredicted RBP20.5■□□□□ 0.87
CACNA1A-240ENST00000637432 SCRIBQ14160 1630 aa20.48■□□□□ 0.87
CACNA1A-240ENST00000637432 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-240ENST00000637432 TPD52L1Q16890 204 aaPredicted RBP20.47■□□□□ 0.87
CACNA1A-240ENST00000637432 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
CACNA1A-240ENST00000637432 TPM4P67936 248 aa20.46■□□□□ 0.87
CACNA1A-240ENST00000637432 ERCC6Q03468 1493 aa20.45■□□□□ 0.86
CACNA1A-240ENST00000637432 HDGFP51858 240 aaKnown RBP20.44■□□□□ 0.86
CACNA1A-240ENST00000637432 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
CACNA1A-240ENST00000637432 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-240ENST00000637432 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-240ENST00000637432 CHMP4BQ9H444 224 aaKnown RBP20.43■□□□□ 0.86
CACNA1A-240ENST00000637432 PAF1Q8N7H5 531 aa20.43■□□□□ 0.86
CACNA1A-240ENST00000637432 GGT6Q6P531 493 aa20.43■□□□□ 0.86
CACNA1A-240ENST00000637432 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-240ENST00000637432 WDR70Q9NW82 654 aa20.41■□□□□ 0.86
CACNA1A-240ENST00000637432 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
CACNA1A-240ENST00000637432 CCAR2Q8N163 923 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-240ENST00000637432 GPATCH3Q96I76 525 aa20.39■□□□□ 0.86
CACNA1A-240ENST00000637432 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-240ENST00000637432 MORC1Q86VD1 984 aa20.39■□□□□ 0.85
CACNA1A-240ENST00000637432 NUTM2DQ5VT03 806 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-240ENST00000637432 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-240ENST00000637432 PPM1FP49593 454 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-240ENST00000637432 MIER1Q8N108 512 aa20.35■□□□□ 0.85
CACNA1A-240ENST00000637432 FOXD4L6Q3SYB3 417 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-240ENST00000637432 FOXD4L3Q6VB84 417 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-240ENST00000637432 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
CACNA1A-240ENST00000637432 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-240ENST00000637432 ITPRIPQ8IWB1 547 aa20.34■□□□□ 0.85
CACNA1A-240ENST00000637432 TPM3P06753 285 aa20.34■□□□□ 0.85
CACNA1A-240ENST00000637432 IBSPP21815 317 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-240ENST00000637432 CCAR1Q8IX12 1150 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-240ENST00000637432 MS4A1P11836 297 aa20.32■□□□□ 0.84
CACNA1A-240ENST00000637432 CCDC43Q96MW1 224 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-240ENST00000637432 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-240ENST00000637432 NOL10Q9BSC4 688 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-240ENST00000637432 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CACNA1A-240ENST00000637432 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CACNA1A-240ENST00000637432 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
CACNA1A-240ENST00000637432 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-240ENST00000637432 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-240ENST00000637432 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-240ENST00000637432 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-240ENST00000637432 TMEM132AQ24JP5 1023 aa20.27■□□□□ 0.84
CACNA1A-240ENST00000637432 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-240ENST00000637432 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
CACNA1A-240ENST00000637432 MTMR7Q9Y216 660 aa20.27■□□□□ 0.84
CACNA1A-240ENST00000637432 SPAG9O60271 1321 aaKnown RBP20.27■□□□□ 0.83
CACNA1A-240ENST00000637432 KANK1Q14678 1352 aa20.26■□□□□ 0.83
CACNA1A-240ENST00000637432 ODF2Q5BJF6 829 aa20.25■□□□□ 0.83
CACNA1A-240ENST00000637432 FYB1O15117 783 aa20.24■□□□□ 0.83
CACNA1A-240ENST00000637432 AMPHP49418 695 aa20.24■□□□□ 0.83
CACNA1A-240ENST00000637432 AMOTL1Q8IY63 956 aa20.24■□□□□ 0.83
CACNA1A-240ENST00000637432 H3BQV1 296 aa20.23■□□□□ 0.83
CACNA1A-240ENST00000637432 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
CACNA1A-240ENST00000637432 AK7Q96M32 723 aa20.23■□□□□ 0.83
CACNA1A-240ENST00000637432 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
CACNA1A-240ENST00000637432 STK31Q9BXU1 1019 aa20.22■□□□□ 0.83
CACNA1A-240ENST00000637432 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-240ENST00000637432 APPP05067 770 aa20.22■□□□□ 0.83
CACNA1A-240ENST00000637432 SLKQ9H2G2 1235 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-240ENST00000637432 RRP12Q5JTH9 1297 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-240ENST00000637432 TPM2P07951 284 aa20.21■□□□□ 0.83
CACNA1A-240ENST00000637432 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms