RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CAMSAP2Q08AD1 1489 aa23.13■■□□□ 1.29
CLN6-219ENST00000637329 KDM6BO15054 1643 aa23.12■■□□□ 1.29
CLN6-219ENST00000637329 DNMT1P26358 1616 aaKnown RBP23.12■■□□□ 1.29
CLN6-219ENST00000637329 ARAP3Q8WWN8 1544 aa23.12■■□□□ 1.29
CLN6-219ENST00000637329 ASXL2Q76L83 1435 aa23.1■■□□□ 1.29
CLN6-219ENST00000637329 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
CLN6-219ENST00000637329 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
CLN6-219ENST00000637329 CDC42BPBQ9Y5S2 1711 aa23.09■■□□□ 1.29
CLN6-219ENST00000637329 AKNAQ7Z591 1439 aa23.08■■□□□ 1.28
CLN6-219ENST00000637329 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
CLN6-219ENST00000637329 CROCC2H7BZ55 1655 aa23.06■■□□□ 1.28
CLN6-219ENST00000637329 ARHGAP5Q13017 1502 aa23.03■■□□□ 1.28
CLN6-219ENST00000637329 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
CLN6-219ENST00000637329 DAPK1P53355 1430 aa23.03■■□□□ 1.28
CLN6-219ENST00000637329 SAMD9LQ8IVG5 1584 aa23.02■■□□□ 1.28
CLN6-219ENST00000637329 PLCH2O75038 1416 aa23.02■■□□□ 1.28
CLN6-219ENST00000637329 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.28
CLN6-219ENST00000637329 HFM1A2PYH4 1435 aa23.01■■□□□ 1.27
CLN6-219ENST00000637329 GCC2Q8IWJ2 1684 aa23.01■■□□□ 1.27
CLN6-219ENST00000637329 SHANK2Q9UPX8 1470 aa23.01■■□□□ 1.27
CLN6-219ENST00000637329 DIP2BQ9P265 1576 aa23.01■■□□□ 1.27
CLN6-219ENST00000637329 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
CLN6-219ENST00000637329 ITGAEP38570 1179 aa22.99■■□□□ 1.27
CLN6-219ENST00000637329 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
CLN6-219ENST00000637329 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
CLN6-219ENST00000637329 ABCC5O15440 1437 aa22.98■■□□□ 1.27
CLN6-219ENST00000637329 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
CLN6-219ENST00000637329 TSPOAP1O95153 1857 aa22.96■■□□□ 1.27
CLN6-219ENST00000637329 ADGRL2O95490 1459 aa22.95■■□□□ 1.26
CLN6-219ENST00000637329 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
CLN6-219ENST00000637329 ABCC1P33527 1531 aa22.94■■□□□ 1.26
CLN6-219ENST00000637329 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
CLN6-219ENST00000637329 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
CLN6-219ENST00000637329 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
CLN6-219ENST00000637329 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
CLN6-219ENST00000637329 SYCP2Q9BX26 1530 aa22.92■■□□□ 1.26
CLN6-219ENST00000637329 MBD5Q9P267 1494 aa22.92■■□□□ 1.26
CLN6-219ENST00000637329 RAB3GAP2Q9H2M9 1393 aa22.91■■□□□ 1.26
CLN6-219ENST00000637329 HRCP23327 699 aa22.91■■□□□ 1.26
CLN6-219ENST00000637329 GLI2P10070 1586 aa22.91■■□□□ 1.26
CLN6-219ENST00000637329 NAIPQ13075 1403 aa22.91■■□□□ 1.26
CLN6-219ENST00000637329 MAST1Q9Y2H9 1570 aa22.9■■□□□ 1.26
CLN6-219ENST00000637329 ZNF777Q9ULD5 760 aaPredicted RBP22.88■■□□□ 1.25
CLN6-219ENST00000637329 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
CLN6-219ENST00000637329 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
CLN6-219ENST00000637329 FANCAO15360 1455 aa22.86■■□□□ 1.25
CLN6-219ENST00000637329 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
CLN6-219ENST00000637329 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
CLN6-219ENST00000637329 C9orf84Q5VXU9 1444 aa22.85■■□□□ 1.25
CLN6-219ENST00000637329 ZEB1P37275 1124 aaPredicted RBP22.84■■□□□ 1.25
CLN6-219ENST00000637329 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
CLN6-219ENST00000637329 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
CLN6-219ENST00000637329 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
CLN6-219ENST00000637329 ANKRD30AQ9BXX3 1397 aa22.81■■□□□ 1.24
CLN6-219ENST00000637329 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
CLN6-219ENST00000637329 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
CLN6-219ENST00000637329 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
CLN6-219ENST00000637329 CLSPNQ9HAW4 1339 aa22.8■■□□□ 1.24
CLN6-219ENST00000637329 ARHGEF12Q9NZN5 1544 aa22.79■■□□□ 1.24
CLN6-219ENST00000637329 HECW2Q9P2P5 1572 aa22.79■■□□□ 1.24
CLN6-219ENST00000637329 FBXO41Q8TF61 875 aa22.78■■□□□ 1.24
CLN6-219ENST00000637329 NEO1Q92859 1461 aa22.77■■□□□ 1.24
CLN6-219ENST00000637329 CHIC2Q9UKJ5 165 aa22.76■■□□□ 1.23
CLN6-219ENST00000637329 TSPY4P0CV99 314 aa22.75■■□□□ 1.23
CLN6-219ENST00000637329 TSPY10P0CW01 314 aa22.75■■□□□ 1.23
CLN6-219ENST00000637329 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLN6-219ENST00000637329 INO80Q9ULG1 1556 aaPredicted RBP22.72■■□□□ 1.23
CLN6-219ENST00000637329 ZFYVE16Q7Z3T8 1539 aa22.72■■□□□ 1.23
CLN6-219ENST00000637329 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
CLN6-219ENST00000637329 RTEL1-TNFRSF6BF6WH68 1400 aa22.71■■□□□ 1.23
CLN6-219ENST00000637329 TRAPPC8Q9Y2L5 1435 aa22.7■■□□□ 1.22
CLN6-219ENST00000637329 ZNF518AQ6AHZ1 1483 aa22.7■■□□□ 1.22
CLN6-219ENST00000637329 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
CLN6-219ENST00000637329 KDM5CP41229 1560 aa22.67■■□□□ 1.22
CLN6-219ENST00000637329 SCAPERQ9BY12 1400 aa22.67■■□□□ 1.22
CLN6-219ENST00000637329 POGZQ7Z3K3 1410 aa22.66■■□□□ 1.22
CLN6-219ENST00000637329 ANKRD50Q9ULJ7 1429 aa22.66■■□□□ 1.22
CLN6-219ENST00000637329 ATP7AQ04656 1500 aa22.66■■□□□ 1.22
CLN6-219ENST00000637329 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
CLN6-219ENST00000637329 TEX14Q8IWB6 1497 aa22.66■■□□□ 1.22
CLN6-219ENST00000637329 PPRC1Q5VV67 1664 aaKnown RBP22.63■■□□□ 1.21
CLN6-219ENST00000637329 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
CLN6-219ENST00000637329 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
CLN6-219ENST00000637329 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
CLN6-219ENST00000637329 UNC13BO14795 1591 aa22.59■■□□□ 1.21
CLN6-219ENST00000637329 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
CLN6-219ENST00000637329 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
CLN6-219ENST00000637329 MLH3Q9UHC1 1453 aa22.57■■□□□ 1.2
CLN6-219ENST00000637329 EIF2AK4Q9P2K8 1649 aaKnown RBP22.56■■□□□ 1.2
CLN6-219ENST00000637329 KIDINS220Q9ULH0 1771 aa22.55■■□□□ 1.2
CLN6-219ENST00000637329 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
CLN6-219ENST00000637329 ZMYM4Q5VZL5 1548 aa22.53■■□□□ 1.2
CLN6-219ENST00000637329 FRMPD1Q5SYB0 1578 aa22.52■■□□□ 1.2
CLN6-219ENST00000637329 AFAP1Q8N556 730 aa22.52■■□□□ 1.2
CLN6-219ENST00000637329 PZPP20742 1482 aa22.52■■□□□ 1.2
CLN6-219ENST00000637329 COL17A1Q9UMD9 1497 aaPredicted RBP22.52■■□□□ 1.2
CLN6-219ENST00000637329 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
CLN6-219ENST00000637329 TRIM52Q96A61 297 aa22.48■■□□□ 1.19
CLN6-219ENST00000637329 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
CLN6-219ENST00000637329 ABCA6Q8N139 1617 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms