RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 MYOM3Q5VTT5 1437 aa11.75□□□□□ -0.53
GABRA1-216ENST00000637044 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
GABRA1-216ENST00000637044 ATP10BO94823 1461 aa11.75□□□□□ -0.53
GABRA1-216ENST00000637044 ARHGEF11O15085 1522 aa11.74□□□□□ -0.53
GABRA1-216ENST00000637044 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
GABRA1-216ENST00000637044 PHLDB1Q86UU1 1377 aa11.74□□□□□ -0.53
GABRA1-216ENST00000637044 ANP32CO43423 234 aa11.74□□□□□ -0.53
GABRA1-216ENST00000637044 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
GABRA1-216ENST00000637044 EHBP1L1Q8N3D4 1523 aa11.72□□□□□ -0.53
GABRA1-216ENST00000637044 FGD6Q6ZV73 1430 aa11.72□□□□□ -0.53
GABRA1-216ENST00000637044 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
GABRA1-216ENST00000637044 RAPGEF6Q8TEU7 1601 aa11.72□□□□□ -0.53
GABRA1-216ENST00000637044 ABCC2Q92887 1545 aa11.71□□□□□ -0.53
GABRA1-216ENST00000637044 TIAM1Q13009 1591 aa11.71□□□□□ -0.53
GABRA1-216ENST00000637044 TIMELESSQ9UNS1 1208 aa11.7□□□□□ -0.54
GABRA1-216ENST00000637044 SCAPERQ9BY12 1400 aa11.69□□□□□ -0.54
GABRA1-216ENST00000637044 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
GABRA1-216ENST00000637044 RAB3GAP2Q9H2M9 1393 aa11.68□□□□□ -0.54
GABRA1-216ENST00000637044 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
GABRA1-216ENST00000637044 NUP155O75694 1391 aa11.68□□□□□ -0.54
GABRA1-216ENST00000637044 RGL3Q3MIN7 710 aa11.67□□□□□ -0.54
GABRA1-216ENST00000637044 WDR7Q9Y4E6 1490 aa11.67□□□□□ -0.54
GABRA1-216ENST00000637044 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
GABRA1-216ENST00000637044 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
GABRA1-216ENST00000637044 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
GABRA1-216ENST00000637044 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
GABRA1-216ENST00000637044 KIF14Q15058 1648 aa11.65□□□□□ -0.54
GABRA1-216ENST00000637044 ERCC6L2Q5T890 1561 aa11.65□□□□□ -0.54
GABRA1-216ENST00000637044 PKD2Q13563 968 aa11.64□□□□□ -0.55
GABRA1-216ENST00000637044 CNGB1Q14028 1251 aaPredicted RBP11.64□□□□□ -0.55
GABRA1-216ENST00000637044 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
GABRA1-216ENST00000637044 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
GABRA1-216ENST00000637044 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
GABRA1-216ENST00000637044 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
GABRA1-216ENST00000637044 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
GABRA1-216ENST00000637044 FANCAO15360 1455 aa11.62□□□□□ -0.55
GABRA1-216ENST00000637044 ADGRL1O94910 1474 aa11.61□□□□□ -0.55
GABRA1-216ENST00000637044 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
GABRA1-216ENST00000637044 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
GABRA1-216ENST00000637044 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
GABRA1-216ENST00000637044 MPHOSPH9Q99550 1183 aa11.6□□□□□ -0.55
GABRA1-216ENST00000637044 TEX14Q8IWB6 1497 aa11.6□□□□□ -0.55
GABRA1-216ENST00000637044 FOXD1Q16676 465 aa11.59□□□□□ -0.55
GABRA1-216ENST00000637044 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
GABRA1-216ENST00000637044 DDX10Q13206 875 aaKnown RBP11.59□□□□□ -0.55
GABRA1-216ENST00000637044 PLCH2O75038 1416 aa11.59□□□□□ -0.55
GABRA1-216ENST00000637044 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
GABRA1-216ENST00000637044 DENND4BO75064 1496 aaPredicted RBP11.58□□□□□ -0.56
GABRA1-216ENST00000637044 C9orf84Q5VXU9 1444 aa11.58□□□□□ -0.56
GABRA1-216ENST00000637044 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
GABRA1-216ENST00000637044 DHX57Q6P158 1386 aaKnown RBP11.57□□□□□ -0.56
GABRA1-216ENST00000637044 GPATCH8Q9UKJ3 1502 aaKnown RBP11.57□□□□□ -0.56
GABRA1-216ENST00000637044 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
GABRA1-216ENST00000637044 KDM5BQ9UGL1 1544 aa11.56□□□□□ -0.56
GABRA1-216ENST00000637044 ABCA8O94911 1581 aa11.56□□□□□ -0.56
GABRA1-216ENST00000637044 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
GABRA1-216ENST00000637044 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
GABRA1-216ENST00000637044 AEBP2Q6ZN18 517 aaPredicted RBP11.53□□□□□ -0.56
GABRA1-216ENST00000637044 DAPK1P53355 1430 aa11.53□□□□□ -0.56
GABRA1-216ENST00000637044 RIMBP3CA6NJZ7 1639 aa11.53□□□□□ -0.56
GABRA1-216ENST00000637044 RIMBP3BA6NNM3 1639 aa11.53□□□□□ -0.56
GABRA1-216ENST00000637044 RIMBP3Q9UFD9 1639 aa11.53□□□□□ -0.56
GABRA1-216ENST00000637044 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
GABRA1-216ENST00000637044 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
GABRA1-216ENST00000637044 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
GABRA1-216ENST00000637044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
GABRA1-216ENST00000637044 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
GABRA1-216ENST00000637044 ABCC5O15440 1437 aa11.49□□□□□ -0.57
GABRA1-216ENST00000637044 HIRIP3Q9BW71 556 aaPredicted RBP11.48□□□□□ -0.57
GABRA1-216ENST00000637044 MIER1Q8N108 512 aa11.48□□□□□ -0.57
GABRA1-216ENST00000637044 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
GABRA1-216ENST00000637044 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
GABRA1-216ENST00000637044 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
GABRA1-216ENST00000637044 ZNF518AQ6AHZ1 1483 aa11.46□□□□□ -0.57
GABRA1-216ENST00000637044 CARD11Q9BXL7 1154 aa11.46□□□□□ -0.58
GABRA1-216ENST00000637044 TRAPPC8Q9Y2L5 1435 aa11.46□□□□□ -0.58
GABRA1-216ENST00000637044 ZCCHC11Q5TAX3 1644 aaKnown RBP11.45□□□□□ -0.58
GABRA1-216ENST00000637044 ABCC10Q5T3U5 1492 aa11.45□□□□□ -0.58
GABRA1-216ENST00000637044 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
GABRA1-216ENST00000637044 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
GABRA1-216ENST00000637044 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
GABRA1-216ENST00000637044 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
GABRA1-216ENST00000637044 NCOA1Q15788 1441 aa11.43□□□□□ -0.58
GABRA1-216ENST00000637044 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
GABRA1-216ENST00000637044 DHX29Q7Z478 1369 aaKnown RBP11.43□□□□□ -0.58
GABRA1-216ENST00000637044 POGKQ9P215 609 aa11.43□□□□□ -0.58
GABRA1-216ENST00000637044 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
GABRA1-216ENST00000637044 NEO1Q92859 1461 aa11.42□□□□□ -0.58
GABRA1-216ENST00000637044 HFM1A2PYH4 1435 aa11.42□□□□□ -0.58
GABRA1-216ENST00000637044 ADCY10Q96PN6 1610 aa11.42□□□□□ -0.58
GABRA1-216ENST00000637044 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
GABRA1-216ENST00000637044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.42□□□□□ -0.58
GABRA1-216ENST00000637044 CDCA8Q53HL2 280 aa11.41□□□□□ -0.58
GABRA1-216ENST00000637044 MAGI3Q5TCQ9 1506 aa11.41□□□□□ -0.58
GABRA1-216ENST00000637044 SLC24A1O60721 1099 aa11.4□□□□□ -0.59
GABRA1-216ENST00000637044 STK26Q9P289 416 aa11.4□□□□□ -0.59
GABRA1-216ENST00000637044 NAIPQ13075 1403 aa11.39□□□□□ -0.59
GABRA1-216ENST00000637044 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
GABRA1-216ENST00000637044 L3MBTL2Q969R5 705 aa11.39□□□□□ -0.59
GABRA1-216ENST00000637044 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms