RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 RRBP1Q9P2E9 1410 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-232ENST00000636966 NCOA2Q15596 1464 aa12.55□□□□□ -0.4
CACNA1A-232ENST00000636966 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
CACNA1A-232ENST00000636966 TROQ12816 1431 aaPredicted RBP12.53□□□□□ -0.4
CACNA1A-232ENST00000636966 DIP2BQ9P265 1576 aa12.52□□□□□ -0.4
CACNA1A-232ENST00000636966 DNMT1P26358 1616 aaKnown RBP12.51□□□□□ -0.41
CACNA1A-232ENST00000636966 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
CACNA1A-232ENST00000636966 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
CACNA1A-232ENST00000636966 TTC37Q6PGP7 1564 aa12.5□□□□□ -0.41
CACNA1A-232ENST00000636966 WDR7Q9Y4E6 1490 aa12.49□□□□□ -0.41
CACNA1A-232ENST00000636966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1A-232ENST00000636966 RICTORQ6R327 1708 aa12.49□□□□□ -0.41
CACNA1A-232ENST00000636966 ASXL2Q76L83 1435 aa12.49□□□□□ -0.41
CACNA1A-232ENST00000636966 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
CACNA1A-232ENST00000636966 PLEKHD1A6NEE1 506 aa12.48□□□□□ -0.41
CACNA1A-232ENST00000636966 KDM5CP41229 1560 aa12.48□□□□□ -0.41
CACNA1A-232ENST00000636966 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-232ENST00000636966 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
CACNA1A-232ENST00000636966 ZNF644Q9H582 1327 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-232ENST00000636966 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
CACNA1A-232ENST00000636966 INO80Q9ULG1 1556 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-232ENST00000636966 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-232ENST00000636966 ZMYM4Q5VZL5 1548 aa12.46□□□□□ -0.41
CACNA1A-232ENST00000636966 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
CACNA1A-232ENST00000636966 FRMPD1Q5SYB0 1578 aa12.46□□□□□ -0.41
CACNA1A-232ENST00000636966 DNAJC5Q9H3Z4 198 aa12.46□□□□□ -0.42
CACNA1A-232ENST00000636966 FGD6Q6ZV73 1430 aa12.46□□□□□ -0.42
CACNA1A-232ENST00000636966 KCNA4P22459 653 aa12.45□□□□□ -0.42
CACNA1A-232ENST00000636966 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
CACNA1A-232ENST00000636966 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-232ENST00000636966 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
CACNA1A-232ENST00000636966 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
CACNA1A-232ENST00000636966 ADGRL2O95490 1459 aa12.44□□□□□ -0.42
CACNA1A-232ENST00000636966 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
CACNA1A-232ENST00000636966 PTPRKQ15262 1439 aa12.43□□□□□ -0.42
CACNA1A-232ENST00000636966 EIF2AK4Q9P2K8 1649 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-232ENST00000636966 ABCC1P33527 1531 aa12.42□□□□□ -0.42
CACNA1A-232ENST00000636966 PTPN23Q9H3S7 1636 aa12.42□□□□□ -0.42
CACNA1A-232ENST00000636966 KDM5DQ9BY66 1539 aa12.41□□□□□ -0.42
CACNA1A-232ENST00000636966 MAGI2Q86UL8 1455 aa12.41□□□□□ -0.42
CACNA1A-232ENST00000636966 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-232ENST00000636966 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
CACNA1A-232ENST00000636966 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-232ENST00000636966 VWDEQ8N2E2 1590 aa12.38□□□□□ -0.43
CACNA1A-232ENST00000636966 RNF17Q9BXT8 1623 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-232ENST00000636966 ITGAEP38570 1179 aa12.38□□□□□ -0.43
CACNA1A-232ENST00000636966 UNC13BO14795 1591 aa12.37□□□□□ -0.43
CACNA1A-232ENST00000636966 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
CACNA1A-232ENST00000636966 CAMSAP2Q08AD1 1489 aa12.36□□□□□ -0.43
CACNA1A-232ENST00000636966 ARHGEF12Q9NZN5 1544 aa12.36□□□□□ -0.43
CACNA1A-232ENST00000636966 CFDP1Q9UEE9 299 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-232ENST00000636966 NEURL4Q96JN8 1562 aa12.36□□□□□ -0.43
CACNA1A-232ENST00000636966 PLCH2O75038 1416 aa12.35□□□□□ -0.43
CACNA1A-232ENST00000636966 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-232ENST00000636966 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
CACNA1A-232ENST00000636966 KIAA1107Q9UPP5 1409 aa12.33□□□□□ -0.44
CACNA1A-232ENST00000636966 ABCC5O15440 1437 aa12.32□□□□□ -0.44
CACNA1A-232ENST00000636966 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
CACNA1A-232ENST00000636966 HNRNPMP52272 730 aaKnown RBP eCLIP12.31□□□□□ -0.44
CACNA1A-232ENST00000636966 KIDINS220Q9ULH0 1771 aa12.31□□□□□ -0.44
CACNA1A-232ENST00000636966 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
CACNA1A-232ENST00000636966 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
CACNA1A-232ENST00000636966 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
CACNA1A-232ENST00000636966 DAPK1P53355 1430 aa12.3□□□□□ -0.44
CACNA1A-232ENST00000636966 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
CACNA1A-232ENST00000636966 CHIC2Q9UKJ5 165 aa12.29□□□□□ -0.44
CACNA1A-232ENST00000636966 NEO1Q92859 1461 aa12.29□□□□□ -0.44
CACNA1A-232ENST00000636966 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
CACNA1A-232ENST00000636966 FANCAO15360 1455 aa12.28□□□□□ -0.44
CACNA1A-232ENST00000636966 SIGLEC1Q9BZZ2 1709 aa12.28□□□□□ -0.44
CACNA1A-232ENST00000636966 ZFYVE16Q7Z3T8 1539 aa12.28□□□□□ -0.44
CACNA1A-232ENST00000636966 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-232ENST00000636966 KDM6BO15054 1643 aa12.27□□□□□ -0.44
CACNA1A-232ENST00000636966 TRAPPC8Q9Y2L5 1435 aa12.27□□□□□ -0.45
CACNA1A-232ENST00000636966 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
CACNA1A-232ENST00000636966 AFAP1Q8N556 730 aa12.25□□□□□ -0.45
CACNA1A-232ENST00000636966 TSPOAP1O95153 1857 aa12.25□□□□□ -0.45
CACNA1A-232ENST00000636966 KDM5AP29375 1690 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-232ENST00000636966 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
CACNA1A-232ENST00000636966 NAIPQ13075 1403 aa12.24□□□□□ -0.45
CACNA1A-232ENST00000636966 EFCAB2Q5VUJ9 269 aa12.24□□□□□ -0.45
CACNA1A-232ENST00000636966 MROH2AA6NES4 1674 aa12.23□□□□□ -0.45
CACNA1A-232ENST00000636966 PLEKHH2Q8IVE3 1493 aa12.23□□□□□ -0.45
CACNA1A-232ENST00000636966 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
CACNA1A-232ENST00000636966 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
CACNA1A-232ENST00000636966 LMTK2Q8IWU2 1503 aa12.23□□□□□ -0.45
CACNA1A-232ENST00000636966 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
CACNA1A-232ENST00000636966 HFM1A2PYH4 1435 aa12.22□□□□□ -0.45
CACNA1A-232ENST00000636966 NCOA1Q15788 1441 aa12.22□□□□□ -0.45
CACNA1A-232ENST00000636966 ADGRL1O94910 1474 aa12.21□□□□□ -0.45
CACNA1A-232ENST00000636966 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-232ENST00000636966 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-232ENST00000636966 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.46
CACNA1A-232ENST00000636966 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
CACNA1A-232ENST00000636966 AGLP35573 1532 aa12.21□□□□□ -0.46
CACNA1A-232ENST00000636966 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
CACNA1A-232ENST00000636966 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
CACNA1A-232ENST00000636966 HECW2Q9P2P5 1572 aa12.2□□□□□ -0.46
CACNA1A-232ENST00000636966 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
CACNA1A-232ENST00000636966 MLH3Q9UHC1 1453 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms