RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
SMARCA2-250ENST00000636367 KCTD17Q8N5Z5 321 aa12.51□□□□□ -0.41
SMARCA2-250ENST00000636367 NLRP6P59044 892 aa12.5□□□□□ -0.41
SMARCA2-250ENST00000636367 DDX27Q96GQ7 796 aaKnown RBP12.5□□□□□ -0.41
SMARCA2-250ENST00000636367 TRAK2O60296 914 aa12.49□□□□□ -0.41
SMARCA2-250ENST00000636367 PDE4AP27815 886 aa12.48□□□□□ -0.41
SMARCA2-250ENST00000636367 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
SMARCA2-250ENST00000636367 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
SMARCA2-250ENST00000636367 CABP2Q9NPB3 220 aa12.46□□□□□ -0.42
SMARCA2-250ENST00000636367 GPR37O15354 613 aa12.44□□□□□ -0.42
SMARCA2-250ENST00000636367 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
SMARCA2-250ENST00000636367 A6NJR5 290 aa12.43□□□□□ -0.42
SMARCA2-250ENST00000636367 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
SMARCA2-250ENST00000636367 RAD21O60216 631 aa12.42□□□□□ -0.42
SMARCA2-250ENST00000636367 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
SMARCA2-250ENST00000636367 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
SMARCA2-250ENST00000636367 CCDC102AQ96A19 550 aa12.4□□□□□ -0.42
SMARCA2-250ENST00000636367 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-250ENST00000636367 SOX12O15370 315 aa12.38□□□□□ -0.43
SMARCA2-250ENST00000636367 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
SMARCA2-250ENST00000636367 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
SMARCA2-250ENST00000636367 MS4A4AQ96JQ5 239 aa12.37□□□□□ -0.43
SMARCA2-250ENST00000636367 DPYSL4O14531 572 aa12.34□□□□□ -0.43
SMARCA2-250ENST00000636367 MCM6Q14566 821 aa12.34□□□□□ -0.43
SMARCA2-250ENST00000636367 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
SMARCA2-250ENST00000636367 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
SMARCA2-250ENST00000636367 AMHR2Q16671 573 aa12.31□□□□□ -0.44
SMARCA2-250ENST00000636367 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
SMARCA2-250ENST00000636367 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
SMARCA2-250ENST00000636367 ZNF428Q96B54 188 aa12.31□□□□□ -0.44
SMARCA2-250ENST00000636367 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
SMARCA2-250ENST00000636367 IGSF3O75054 1194 aa12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 MAP2K5Q13163 448 aa12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 FOXD4L5Q5VV16 416 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 FOXD4L4Q8WXT5 416 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-250ENST00000636367 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
SMARCA2-250ENST00000636367 IRF6O14896 467 aa12.27□□□□□ -0.44
SMARCA2-250ENST00000636367 RETREG2Q8NC44 543 aa12.27□□□□□ -0.44
SMARCA2-250ENST00000636367 AKT1S1Q96B36 256 aa12.27□□□□□ -0.44
SMARCA2-250ENST00000636367 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
SMARCA2-250ENST00000636367 GOPCQ9HD26 462 aa12.27□□□□□ -0.45
SMARCA2-250ENST00000636367 TTLL12Q14166 644 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-250ENST00000636367 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
SMARCA2-250ENST00000636367 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
SMARCA2-250ENST00000636367 CCDC97Q96F63 343 aaPredicted RBP12.26□□□□□ -0.45
SMARCA2-250ENST00000636367 TMCO4Q5TGY1 634 aa12.25□□□□□ -0.45
SMARCA2-250ENST00000636367 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-250ENST00000636367 FECHP22830 423 aa12.25□□□□□ -0.45
SMARCA2-250ENST00000636367 GZF1Q9H116 711 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-250ENST00000636367 MS4A1P11836 297 aa12.24□□□□□ -0.45
SMARCA2-250ENST00000636367 PDIA6Q15084 440 aa12.24□□□□□ -0.45
SMARCA2-250ENST00000636367 NUTM2FA1L443 756 aa12.23□□□□□ -0.45
SMARCA2-250ENST00000636367 FNBP4Q8N3X1 1017 aaPredicted RBP12.23□□□□□ -0.45
SMARCA2-250ENST00000636367 MFAP1P55081 439 aaKnown RBP12.22□□□□□ -0.45
SMARCA2-250ENST00000636367 IRF5Q13568 498 aa12.22□□□□□ -0.45
SMARCA2-250ENST00000636367 RBM25P49756 843 aaKnown RBP12.21□□□□□ -0.45
SMARCA2-250ENST00000636367 SERPINA10Q9UK55 444 aa12.21□□□□□ -0.45
SMARCA2-250ENST00000636367 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
SMARCA2-250ENST00000636367 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-250ENST00000636367 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
SMARCA2-250ENST00000636367 SPDYE16A6NNV3 312 aaPredicted RBP12.17□□□□□ -0.46
SMARCA2-250ENST00000636367 MAP3K13O43283 966 aa12.17□□□□□ -0.46
SMARCA2-250ENST00000636367 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-250ENST00000636367 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
SMARCA2-250ENST00000636367 GNPATO15228 680 aa12.16□□□□□ -0.46
SMARCA2-250ENST00000636367 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
SMARCA2-250ENST00000636367 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-250ENST00000636367 DSG2Q14126 1118 aa12.11□□□□□ -0.47
SMARCA2-250ENST00000636367 SH3D19Q5HYK7 790 aa12.11□□□□□ -0.47
SMARCA2-250ENST00000636367 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
SMARCA2-250ENST00000636367 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
SMARCA2-250ENST00000636367 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
SMARCA2-250ENST00000636367 NACADO15069 1562 aa12.09□□□□□ -0.47
SMARCA2-250ENST00000636367 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
SMARCA2-250ENST00000636367 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
SMARCA2-250ENST00000636367 HIC1Q14526 733 aa12.07□□□□□ -0.48
SMARCA2-250ENST00000636367 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
SMARCA2-250ENST00000636367 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
SMARCA2-250ENST00000636367 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
SMARCA2-250ENST00000636367 SHROOM4Q9ULL8 1493 aa12.06□□□□□ -0.48
SMARCA2-250ENST00000636367 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-250ENST00000636367 OSBPP22059 807 aa12.05□□□□□ -0.48
SMARCA2-250ENST00000636367 FCHSD2O94868 740 aa12.04□□□□□ -0.48
SMARCA2-250ENST00000636367 ZNF330Q9Y3S2 320 aaPredicted RBP12.02□□□□□ -0.48
SMARCA2-250ENST00000636367 DCAF1Q9Y4B6 1507 aa12.01□□□□□ -0.49
SMARCA2-250ENST00000636367 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
SMARCA2-250ENST00000636367 GOLGA2Q08379 1002 aa12□□□□□ -0.49
SMARCA2-250ENST00000636367 SKIV2LQ15477 1246 aaKnown RBP12□□□□□ -0.49
SMARCA2-250ENST00000636367 POLR3EQ9NVU0 708 aa12□□□□□ -0.49
SMARCA2-250ENST00000636367 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
SMARCA2-250ENST00000636367 SNRKQ9NRH2 765 aa12□□□□□ -0.49
SMARCA2-250ENST00000636367 DDX12PQ92771 950 aa11.97□□□□□ -0.49
SMARCA2-250ENST00000636367 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
SMARCA2-250ENST00000636367 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-250ENST00000636367 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
SMARCA2-250ENST00000636367 E9PSI1 815 aa11.94□□□□□ -0.5
SMARCA2-250ENST00000636367 PTGDRQ13258 359 aa11.94□□□□□ -0.5
SMARCA2-250ENST00000636367 FBXO31Q5XUX0 539 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms