RNA–Protein interactions for RNA: ENST00000635989.1

CLN5-207, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 604 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-207ENST00000635989 LOC105371045A0A1W2PR82 267 aa31■■■□□ 2.55
CLN5-207ENST00000635989 CDC42BPBQ9Y5S2 1711 aa30.99■■■□□ 2.55
CLN5-207ENST00000635989 POGZQ7Z3K3 1410 aa30.98■■■□□ 2.55
CLN5-207ENST00000635989 CDC42BPAQ5VT25 1732 aa30.97■■■□□ 2.55
CLN5-207ENST00000635989 EFCAB2Q5VUJ9 269 aa30.94■■■□□ 2.54
CLN5-207ENST00000635989 SCAPERQ9BY12 1400 aa30.94■■■□□ 2.54
CLN5-207ENST00000635989 ZFYVE16Q7Z3T8 1539 aa30.93■■■□□ 2.54
CLN5-207ENST00000635989 EHBP1L1Q8N3D4 1523 aa30.93■■■□□ 2.54
CLN5-207ENST00000635989 MTUS2Q5JR59 1369 aa30.9■■■□□ 2.54
CLN5-207ENST00000635989 ABCC1P33527 1531 aa30.88■■■□□ 2.53
CLN5-207ENST00000635989 VPS8Q8N3P4 1428 aa30.87■■■□□ 2.53
CLN5-207ENST00000635989 ITSN2Q9NZM3 1697 aa30.86■■■□□ 2.53
CLN5-207ENST00000635989 ZNF518AQ6AHZ1 1483 aa30.85■■■□□ 2.53
CLN5-207ENST00000635989 MAGI2Q86UL8 1455 aa30.85■■■□□ 2.53
CLN5-207ENST00000635989 KDM5CP41229 1560 aa30.82■■■□□ 2.52
CLN5-207ENST00000635989 TIAM1Q13009 1591 aa30.82■■■□□ 2.52
CLN5-207ENST00000635989 YEATS2Q9ULM3 1422 aa30.81■■■□□ 2.52
CLN5-207ENST00000635989 HECW2Q9P2P5 1572 aa30.8■■■□□ 2.52
CLN5-207ENST00000635989 BCORL1Q5H9F3 1711 aa30.8■■■□□ 2.52
CLN5-207ENST00000635989 SAMD9LQ8IVG5 1584 aa30.79■■■□□ 2.52
CLN5-207ENST00000635989 GPATCH8Q9UKJ3 1502 aaKnown RBP30.78■■■□□ 2.52
CLN5-207ENST00000635989 ADAMTSL3P82987 1691 aa30.77■■■□□ 2.52
CLN5-207ENST00000635989 CCNB3Q8WWL7 1395 aa30.77■■■□□ 2.52
CLN5-207ENST00000635989 SUPT6HQ7KZ85 1726 aaKnown RBP30.75■■■□□ 2.51
CLN5-207ENST00000635989 ARID4BQ4LE39 1312 aaPredicted RBP30.74■■■□□ 2.51
CLN5-207ENST00000635989 SIGLEC1Q9BZZ2 1709 aa30.74■■■□□ 2.51
CLN5-207ENST00000635989 SYCP2Q9BX26 1530 aa30.73■■■□□ 2.51
CLN5-207ENST00000635989 ARHGEF12Q9NZN5 1544 aa30.73■■■□□ 2.51
CLN5-207ENST00000635989 MADDQ8WXG6 1647 aa30.72■■■□□ 2.51
CLN5-207ENST00000635989 C9orf84Q5VXU9 1444 aa30.69■■■□□ 2.5
CLN5-207ENST00000635989 TRAPPC8Q9Y2L5 1435 aa30.69■■■□□ 2.5
CLN5-207ENST00000635989 ABCA6Q8N139 1617 aa30.69■■■□□ 2.5
CLN5-207ENST00000635989 DIP2CQ9Y2E4 1556 aa30.68■■■□□ 2.5
CLN5-207ENST00000635989 ZNF777Q9ULD5 760 aaPredicted RBP30.68■■■□□ 2.5
CLN5-207ENST00000635989 ATP10AO60312 1499 aa30.66■■■□□ 2.5
CLN5-207ENST00000635989 PLEKHH2Q8IVE3 1493 aa30.66■■■□□ 2.5
CLN5-207ENST00000635989 AFAP1Q8N556 730 aa30.66■■■□□ 2.5
CLN5-207ENST00000635989 NCOA2Q15596 1464 aa30.65■■■□□ 2.5
CLN5-207ENST00000635989 CFDP1Q9UEE9 299 aaPredicted RBP30.64■■■□□ 2.5
CLN5-207ENST00000635989 MYT1LQ9UL68 1186 aa30.64■■■□□ 2.5
CLN5-207ENST00000635989 RIMS1Q86UR5 1692 aaKnown RBP30.64■■■□□ 2.5
CLN5-207ENST00000635989 MLH3Q9UHC1 1453 aa30.63■■■□□ 2.49
CLN5-207ENST00000635989 LRRC9Q6ZRR7 1453 aa30.63■■■□□ 2.49
CLN5-207ENST00000635989 MAP3K1Q13233 1512 aa30.62■■■□□ 2.49
CLN5-207ENST00000635989 KIDINS220Q9ULH0 1771 aa30.6■■■□□ 2.49
CLN5-207ENST00000635989 FER1L4A9Z1Z3 1794 aa30.59■■■□□ 2.49
CLN5-207ENST00000635989 REREQ9P2R6 1566 aa30.59■■■□□ 2.49
CLN5-207ENST00000635989 PTPRMP28827 1452 aa30.59■■■□□ 2.49
CLN5-207ENST00000635989 KIAA1107Q9UPP5 1409 aa30.57■■■□□ 2.48
CLN5-207ENST00000635989 INO80Q9ULG1 1556 aaPredicted RBP30.55■■■□□ 2.48
CLN5-207ENST00000635989 ATP7AQ04656 1500 aa30.53■■■□□ 2.48
CLN5-207ENST00000635989 CAMSAP2Q08AD1 1489 aa30.5■■■□□ 2.47
CLN5-207ENST00000635989 HNRNPMP52272 730 aaKnown RBP eCLIP30.5■■■□□ 2.47
CLN5-207ENST00000635989 MLECQ14165 292 aa30.5■■■□□ 2.47
CLN5-207ENST00000635989 SPAG9O60271 1321 aaKnown RBP30.47■■■□□ 2.47
CLN5-207ENST00000635989 ZNF644Q9H582 1327 aaPredicted RBP30.46■■■□□ 2.47
CLN5-207ENST00000635989 AGLP35573 1532 aa30.45■■■□□ 2.47
CLN5-207ENST00000635989 APLP2Q06481 763 aa30.43■■■□□ 2.46
CLN5-207ENST00000635989 MBD5Q9P267 1494 aa30.43■■■□□ 2.46
CLN5-207ENST00000635989 KANK4Q5T7N3 995 aaPredicted RBP30.42■■■□□ 2.46
CLN5-207ENST00000635989 CCDC141Q6ZP82 1450 aa30.41■■■□□ 2.46
CLN5-207ENST00000635989 ADGBQ8N7X0 1667 aa30.39■■■□□ 2.46
CLN5-207ENST00000635989 PLXNC1O60486 1568 aa30.38■■■□□ 2.45
CLN5-207ENST00000635989 MYOM3Q5VTT5 1437 aa30.37■■■□□ 2.45
CLN5-207ENST00000635989 ARHGEF5Q12774 1597 aa30.37■■■□□ 2.45
CLN5-207ENST00000635989 A2MP01023 1474 aa30.34■■■□□ 2.45
CLN5-207ENST00000635989 PLPPR3Q6T4P5 718 aa30.33■■■□□ 2.45
CLN5-207ENST00000635989 MIA2Q96PC5 1412 aa30.3■■■□□ 2.44
CLN5-207ENST00000635989 RTEL1-TNFRSF6BF6WH68 1400 aa30.29■■■□□ 2.44
CLN5-207ENST00000635989 LMTK3Q96Q04 1460 aa30.25■■■□□ 2.43
CLN5-207ENST00000635989 C3P01024 1663 aa30.24■■■□□ 2.43
CLN5-207ENST00000635989 PTPN23Q9H3S7 1636 aa30.24■■■□□ 2.43
CLN5-207ENST00000635989 ESF1Q9H501 851 aaKnown RBP30.22■■■□□ 2.43
CLN5-207ENST00000635989 MAST1Q9Y2H9 1570 aa30.22■■■□□ 2.43
CLN5-207ENST00000635989 MROH2AA6NES4 1674 aa30.21■■■□□ 2.43
CLN5-207ENST00000635989 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
CLN5-207ENST00000635989 RSPH4AQ5TD94 716 aa30.21■■■□□ 2.43
CLN5-207ENST00000635989 CNTLNQ9NXG0 1405 aa30.21■■■□□ 2.43
CLN5-207ENST00000635989 CROCC2H7BZ55 1655 aa30.2■■■□□ 2.43
CLN5-207ENST00000635989 CLTCQ00610 1675 aaKnown RBP30.17■■■□□ 2.42
CLN5-207ENST00000635989 FGD6Q6ZV73 1430 aa30.16■■■□□ 2.42
CLN5-207ENST00000635989 TSPY4P0CV99 314 aa30.14■■■□□ 2.42
CLN5-207ENST00000635989 TSPY10P0CW01 314 aa30.14■■■□□ 2.42
CLN5-207ENST00000635989 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
CLN5-207ENST00000635989 DHX29Q7Z478 1369 aaKnown RBP30.13■■■□□ 2.41
CLN5-207ENST00000635989 TCOF1Q13428 1488 aaKnown RBP30.11■■■□□ 2.41
CLN5-207ENST00000635989 DNMT1P26358 1616 aaKnown RBP30.11■■■□□ 2.41
CLN5-207ENST00000635989 SHANK2Q9UPX8 1470 aa30.1■■■□□ 2.41
CLN5-207ENST00000635989 GGT6Q6P531 493 aa30.07■■■□□ 2.4
CLN5-207ENST00000635989 UHRF1BP1Q6BDS2 1440 aa30.05■■■□□ 2.4
CLN5-207ENST00000635989 EIF2AK4Q9P2K8 1649 aaKnown RBP30.05■■■□□ 2.4
CLN5-207ENST00000635989 FAM135AQ9P2D6 1515 aa30.04■■■□□ 2.4
CLN5-207ENST00000635989 KDM5DQ9BY66 1539 aa30.03■■■□□ 2.4
CLN5-207ENST00000635989 DAPK1P53355 1430 aa30.03■■■□□ 2.4
CLN5-207ENST00000635989 RNF17Q9BXT8 1623 aaKnown RBP30.02■■■□□ 2.4
CLN5-207ENST00000635989 ABCC5O15440 1437 aa30.02■■■□□ 2.4
CLN5-207ENST00000635989 KIF3BO15066 747 aa30■■■□□ 2.39
CLN5-207ENST00000635989 HSPA2P54652 639 aa30■■■□□ 2.39
CLN5-207ENST00000635989 NPATQ14207 1427 aa29.99■■■□□ 2.39
CLN5-207ENST00000635989 DUOX2Q9NRD8 1548 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms