RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 LRRC9Q6ZRR7 1453 aa24.35■■□□□ 1.49
CLN6-211ENST00000635754 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
CLN6-211ENST00000635754 CDC42BPBQ9Y5S2 1711 aa24.34■■□□□ 1.49
CLN6-211ENST00000635754 COL17A1Q9UMD9 1497 aaPredicted RBP24.33■■□□□ 1.49
CLN6-211ENST00000635754 AKNAQ7Z591 1439 aa24.3■■□□□ 1.48
CLN6-211ENST00000635754 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
CLN6-211ENST00000635754 ITSN2Q9NZM3 1697 aa24.29■■□□□ 1.48
CLN6-211ENST00000635754 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
CLN6-211ENST00000635754 NCOA2Q15596 1464 aa24.27■■□□□ 1.48
CLN6-211ENST00000635754 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
CLN6-211ENST00000635754 ADGRL1O94910 1474 aa24.26■■□□□ 1.47
CLN6-211ENST00000635754 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
CLN6-211ENST00000635754 DENND4BO75064 1496 aaPredicted RBP24.22■■□□□ 1.47
CLN6-211ENST00000635754 RICTORQ6R327 1708 aa24.22■■□□□ 1.47
CLN6-211ENST00000635754 FRMPD1Q5SYB0 1578 aa24.21■■□□□ 1.47
CLN6-211ENST00000635754 SCAPERQ9BY12 1400 aa24.2■■□□□ 1.46
CLN6-211ENST00000635754 ABCC1P33527 1531 aa24.18■■□□□ 1.46
CLN6-211ENST00000635754 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
CLN6-211ENST00000635754 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
CLN6-211ENST00000635754 SAMD9LQ8IVG5 1584 aa24.17■■□□□ 1.46
CLN6-211ENST00000635754 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
CLN6-211ENST00000635754 ZNF777Q9ULD5 760 aaPredicted RBP24.15■■□□□ 1.46
CLN6-211ENST00000635754 ZMYM4Q5VZL5 1548 aa24.12■■□□□ 1.45
CLN6-211ENST00000635754 ZNF518AQ6AHZ1 1483 aa24.12■■□□□ 1.45
CLN6-211ENST00000635754 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
CLN6-211ENST00000635754 SYCP2Q9BX26 1530 aa24.11■■□□□ 1.45
CLN6-211ENST00000635754 ARHGEF12Q9NZN5 1544 aa24.1■■□□□ 1.45
CLN6-211ENST00000635754 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
CLN6-211ENST00000635754 KDM5CP41229 1560 aa24.08■■□□□ 1.44
CLN6-211ENST00000635754 KIAA1107Q9UPP5 1409 aa24.07■■□□□ 1.44
CLN6-211ENST00000635754 ARHGEF40Q8TER5 1519 aa24.06■■□□□ 1.44
CLN6-211ENST00000635754 CAMSAP2Q08AD1 1489 aa24.05■■□□□ 1.44
CLN6-211ENST00000635754 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
CLN6-211ENST00000635754 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
CLN6-211ENST00000635754 ZFYVE16Q7Z3T8 1539 aa24.04■■□□□ 1.44
CLN6-211ENST00000635754 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
CLN6-211ENST00000635754 HECW2Q9P2P5 1572 aa24.03■■□□□ 1.44
CLN6-211ENST00000635754 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
CLN6-211ENST00000635754 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
CLN6-211ENST00000635754 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.43
CLN6-211ENST00000635754 YEATS2Q9ULM3 1422 aa23.98■■□□□ 1.43
CLN6-211ENST00000635754 MBD5Q9P267 1494 aa23.98■■□□□ 1.43
CLN6-211ENST00000635754 MLH3Q9UHC1 1453 aa23.98■■□□□ 1.43
CLN6-211ENST00000635754 PTPN23Q9H3S7 1636 aa23.97■■□□□ 1.43
CLN6-211ENST00000635754 MYT1LQ9UL68 1186 aa23.97■■□□□ 1.43
CLN6-211ENST00000635754 FGD6Q6ZV73 1430 aa23.97■■□□□ 1.43
CLN6-211ENST00000635754 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.43
CLN6-211ENST00000635754 KIDINS220Q9ULH0 1771 aa23.95■■□□□ 1.42
CLN6-211ENST00000635754 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
CLN6-211ENST00000635754 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
CLN6-211ENST00000635754 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
CLN6-211ENST00000635754 SPAG9O60271 1321 aaKnown RBP23.93■■□□□ 1.42
CLN6-211ENST00000635754 ABCA6Q8N139 1617 aa23.93■■□□□ 1.42
CLN6-211ENST00000635754 DIP2CQ9Y2E4 1556 aa23.92■■□□□ 1.42
CLN6-211ENST00000635754 ATP7AQ04656 1500 aa23.92■■□□□ 1.42
CLN6-211ENST00000635754 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
CLN6-211ENST00000635754 ATP10AO60312 1499 aa23.91■■□□□ 1.42
CLN6-211ENST00000635754 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
CLN6-211ENST00000635754 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
CLN6-211ENST00000635754 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
CLN6-211ENST00000635754 RTEL1-TNFRSF6BF6WH68 1400 aa23.85■■□□□ 1.41
CLN6-211ENST00000635754 SIGLEC1Q9BZZ2 1709 aa23.85■■□□□ 1.41
CLN6-211ENST00000635754 CROCC2H7BZ55 1655 aa23.84■■□□□ 1.41
CLN6-211ENST00000635754 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
CLN6-211ENST00000635754 DNMT1P26358 1616 aaKnown RBP23.83■■□□□ 1.41
CLN6-211ENST00000635754 ADGBQ8N7X0 1667 aa23.83■■□□□ 1.41
CLN6-211ENST00000635754 TSPY4P0CV99 314 aa23.83■■□□□ 1.4
CLN6-211ENST00000635754 TSPY10P0CW01 314 aa23.83■■□□□ 1.4
CLN6-211ENST00000635754 MAST1Q9Y2H9 1570 aa23.82■■□□□ 1.4
CLN6-211ENST00000635754 BCORL1Q5H9F3 1711 aa23.81■■□□□ 1.4
CLN6-211ENST00000635754 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
CLN6-211ENST00000635754 DAPK1P53355 1430 aa23.78■■□□□ 1.4
CLN6-211ENST00000635754 SHANK2Q9UPX8 1470 aa23.78■■□□□ 1.4
CLN6-211ENST00000635754 ABCC5O15440 1437 aa23.78■■□□□ 1.4
CLN6-211ENST00000635754 A2MP01023 1474 aa23.76■■□□□ 1.39
CLN6-211ENST00000635754 AGLP35573 1532 aa23.76■■□□□ 1.39
CLN6-211ENST00000635754 KDM4FA0A1W2PPD8 638 aa23.76■■□□□ 1.39
CLN6-211ENST00000635754 FOXD1Q16676 465 aa23.76■■□□□ 1.39
CLN6-211ENST00000635754 PLXNC1O60486 1568 aa23.75■■□□□ 1.39
CLN6-211ENST00000635754 ADAMTSL3P82987 1691 aa23.75■■□□□ 1.39
CLN6-211ENST00000635754 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.39
CLN6-211ENST00000635754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.39
CLN6-211ENST00000635754 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
CLN6-211ENST00000635754 MLECQ14165 292 aa23.68■■□□□ 1.38
CLN6-211ENST00000635754 FER1L4A9Z1Z3 1794 aa23.68■■□□□ 1.38
CLN6-211ENST00000635754 DHX29Q7Z478 1369 aaKnown RBP23.68■■□□□ 1.38
CLN6-211ENST00000635754 RIMS1Q86UR5 1692 aaKnown RBP23.65■■□□□ 1.38
CLN6-211ENST00000635754 DUOX2Q9NRD8 1548 aa23.65■■□□□ 1.38
CLN6-211ENST00000635754 CHIC2Q9UKJ5 165 aa23.64■■□□□ 1.37
CLN6-211ENST00000635754 ANKRD30AQ9BXX3 1397 aa23.64■■□□□ 1.37
CLN6-211ENST00000635754 ADGRL2O95490 1459 aa23.64■■□□□ 1.37
CLN6-211ENST00000635754 KIF15Q9NS87 1388 aa23.63■■□□□ 1.37
CLN6-211ENST00000635754 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
CLN6-211ENST00000635754 NCOA1Q15788 1441 aa23.6■■□□□ 1.37
CLN6-211ENST00000635754 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
CLN6-211ENST00000635754 PTPRKQ15262 1439 aa23.58■■□□□ 1.37
CLN6-211ENST00000635754 PTPRMP28827 1452 aa23.58■■□□□ 1.37
CLN6-211ENST00000635754 ITGAEP38570 1179 aa23.58■■□□□ 1.36
CLN6-211ENST00000635754 ERBINQ96RT1 1412 aa23.57■■□□□ 1.36
CLN6-211ENST00000635754 KIF3BO15066 747 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms