RNA–Protein interactions for RNA: ENST00000635397.1

SMARCA2-241, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-241ENST00000635397 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
SMARCA2-241ENST00000635397 IER5LQ5T953 404 aa11.58□□□□□ -0.56
SMARCA2-241ENST00000635397 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
SMARCA2-241ENST00000635397 G3V3G9 751 aa11.56□□□□□ -0.56
SMARCA2-241ENST00000635397 SMYD5Q6GMV2 418 aa11.56□□□□□ -0.56
SMARCA2-241ENST00000635397 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
SMARCA2-241ENST00000635397 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
SMARCA2-241ENST00000635397 PLCG2P16885 1265 aa11.53□□□□□ -0.56
SMARCA2-241ENST00000635397 DSG2Q14126 1118 aa11.53□□□□□ -0.56
SMARCA2-241ENST00000635397 GABBR2O75899 941 aa11.52□□□□□ -0.57
SMARCA2-241ENST00000635397 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
SMARCA2-241ENST00000635397 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-241ENST00000635397 FOXK1P85037 733 aa11.5□□□□□ -0.57
SMARCA2-241ENST00000635397 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
SMARCA2-241ENST00000635397 DPYSL4O14531 572 aa11.48□□□□□ -0.57
SMARCA2-241ENST00000635397 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-241ENST00000635397 DCBLD2Q96PD2 775 aa11.48□□□□□ -0.57
SMARCA2-241ENST00000635397 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
SMARCA2-241ENST00000635397 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
SMARCA2-241ENST00000635397 SEC24BO95487 1268 aa11.46□□□□□ -0.57
SMARCA2-241ENST00000635397 MLLT3P42568 568 aaPredicted RBP11.45□□□□□ -0.58
SMARCA2-241ENST00000635397 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-241ENST00000635397 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-241ENST00000635397 KIF3CO14782 793 aa11.43□□□□□ -0.58
SMARCA2-241ENST00000635397 PDIA6Q15084 440 aa11.41□□□□□ -0.58
SMARCA2-241ENST00000635397 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
SMARCA2-241ENST00000635397 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
SMARCA2-241ENST00000635397 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
SMARCA2-241ENST00000635397 RBM26Q5T8P6 1007 aaKnown RBP11.39□□□□□ -0.59
SMARCA2-241ENST00000635397 ZMYND10O75800 440 aa11.38□□□□□ -0.59
SMARCA2-241ENST00000635397 POTEHQ6S545 545 aa11.38□□□□□ -0.59
SMARCA2-241ENST00000635397 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
SMARCA2-241ENST00000635397 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
SMARCA2-241ENST00000635397 GPIHBP1Q8IV16 184 aa11.37□□□□□ -0.59
SMARCA2-241ENST00000635397 C7P10643 843 aa11.36□□□□□ -0.59
SMARCA2-241ENST00000635397 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCA2-241ENST00000635397 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
SMARCA2-241ENST00000635397 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
SMARCA2-241ENST00000635397 POTEFA5A3E0 1075 aa11.33□□□□□ -0.6
SMARCA2-241ENST00000635397 BRPF1P55201 1214 aaPredicted RBP11.33□□□□□ -0.6
SMARCA2-241ENST00000635397 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
SMARCA2-241ENST00000635397 NEUROD2Q15784 382 aa11.31□□□□□ -0.6
SMARCA2-241ENST00000635397 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
SMARCA2-241ENST00000635397 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
SMARCA2-241ENST00000635397 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-241ENST00000635397 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
SMARCA2-241ENST00000635397 TBC1D12O60347 775 aa11.28□□□□□ -0.6
SMARCA2-241ENST00000635397 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
SMARCA2-241ENST00000635397 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
SMARCA2-241ENST00000635397 AK7Q96M32 723 aa11.25□□□□□ -0.61
SMARCA2-241ENST00000635397 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
SMARCA2-241ENST00000635397 EVI5O60447 810 aa11.22□□□□□ -0.61
SMARCA2-241ENST00000635397 PTGER2P43116 358 aa11.22□□□□□ -0.61
SMARCA2-241ENST00000635397 DDX12PQ92771 950 aa11.22□□□□□ -0.61
SMARCA2-241ENST00000635397 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-241ENST00000635397 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-241ENST00000635397 OSBPP22059 807 aa11.2□□□□□ -0.62
SMARCA2-241ENST00000635397 GPR37O15354 613 aa11.19□□□□□ -0.62
SMARCA2-241ENST00000635397 PTCD2Q8WV60 388 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-241ENST00000635397 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.18□□□□□ -0.62
SMARCA2-241ENST00000635397 SLC34A2O95436 690 aa11.16□□□□□ -0.62
SMARCA2-241ENST00000635397 TRIM66O15016 1216 aa11.14□□□□□ -0.63
SMARCA2-241ENST00000635397 GPBP1L1Q9HC44 474 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-241ENST00000635397 GNPATO15228 680 aa11.12□□□□□ -0.63
SMARCA2-241ENST00000635397 FCHSD2O94868 740 aa11.12□□□□□ -0.63
SMARCA2-241ENST00000635397 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
SMARCA2-241ENST00000635397 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
SMARCA2-241ENST00000635397 PDE4DQ08499 809 aa11.11□□□□□ -0.63
SMARCA2-241ENST00000635397 HIC1Q14526 733 aa11.11□□□□□ -0.63
SMARCA2-241ENST00000635397 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
SMARCA2-241ENST00000635397 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
SMARCA2-241ENST00000635397 TIMELESSQ9UNS1 1208 aa11.1□□□□□ -0.63
SMARCA2-241ENST00000635397 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
SMARCA2-241ENST00000635397 PCDHGA4Q9Y5G9 962 aa11.08□□□□□ -0.64
SMARCA2-241ENST00000635397 IRF6O14896 467 aa11.07□□□□□ -0.64
SMARCA2-241ENST00000635397 PHF14O94880 888 aa11.07□□□□□ -0.64
SMARCA2-241ENST00000635397 EPAS1Q99814 870 aa11.07□□□□□ -0.64
SMARCA2-241ENST00000635397 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
SMARCA2-241ENST00000635397 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
SMARCA2-241ENST00000635397 FECHP22830 423 aa11.05□□□□□ -0.64
SMARCA2-241ENST00000635397 PTGDRQ13258 359 aa11.05□□□□□ -0.64
SMARCA2-241ENST00000635397 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-241ENST00000635397 DAXXQ9UER7 740 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-241ENST00000635397 MAP3K7O43318 606 aa11.03□□□□□ -0.64
SMARCA2-241ENST00000635397 RBM33Q96EV2 1170 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-241ENST00000635397 IL27Q8NEV9 243 aa11.02□□□□□ -0.65
SMARCA2-241ENST00000635397 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
SMARCA2-241ENST00000635397 PCDHGA10Q9Y5H3 936 aa11.02□□□□□ -0.65
SMARCA2-241ENST00000635397 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
SMARCA2-241ENST00000635397 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
SMARCA2-241ENST00000635397 AMHR2Q16671 573 aa10.99□□□□□ -0.65
SMARCA2-241ENST00000635397 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
SMARCA2-241ENST00000635397 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
SMARCA2-241ENST00000635397 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
SMARCA2-241ENST00000635397 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
SMARCA2-241ENST00000635397 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
SMARCA2-241ENST00000635397 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
SMARCA2-241ENST00000635397 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
SMARCA2-241ENST00000635397 POTEJP0CG39 1038 aa10.96□□□□□ -0.65
SMARCA2-241ENST00000635397 PARP9Q8IXQ6 854 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms