RNA–Protein interactions for RNA: ENST00000634688.1

SMARCA2-225, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-225ENST00000634688 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
SMARCA2-225ENST00000634688 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
SMARCA2-225ENST00000634688 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
SMARCA2-225ENST00000634688 STK25O00506 426 aa13.12□□□□□ -0.31
SMARCA2-225ENST00000634688 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
SMARCA2-225ENST00000634688 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
SMARCA2-225ENST00000634688 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
SMARCA2-225ENST00000634688 VARS2Q5ST30 1063 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-225ENST00000634688 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
SMARCA2-225ENST00000634688 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
SMARCA2-225ENST00000634688 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
SMARCA2-225ENST00000634688 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
SMARCA2-225ENST00000634688 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
SMARCA2-225ENST00000634688 PTGER2P43116 358 aa12.94□□□□□ -0.34
SMARCA2-225ENST00000634688 TMEM92Q6UXU6 159 aa12.94□□□□□ -0.34
SMARCA2-225ENST00000634688 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
SMARCA2-225ENST00000634688 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-225ENST00000634688 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
SMARCA2-225ENST00000634688 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-225ENST00000634688 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-225ENST00000634688 CCDC180Q9P1Z9 1646 aa12.87□□□□□ -0.35
SMARCA2-225ENST00000634688 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
SMARCA2-225ENST00000634688 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
SMARCA2-225ENST00000634688 DNAJC5Q9H3Z4 198 aa12.84□□□□□ -0.35
SMARCA2-225ENST00000634688 PHF8Q9UPP1 1060 aa12.83□□□□□ -0.36
SMARCA2-225ENST00000634688 SOX12O15370 315 aa12.81□□□□□ -0.36
SMARCA2-225ENST00000634688 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
SMARCA2-225ENST00000634688 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
SMARCA2-225ENST00000634688 ARSIQ5FYB1 569 aa12.8□□□□□ -0.36
SMARCA2-225ENST00000634688 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
SMARCA2-225ENST00000634688 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
SMARCA2-225ENST00000634688 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
SMARCA2-225ENST00000634688 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-225ENST00000634688 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
SMARCA2-225ENST00000634688 NLRP6P59044 892 aa12.76□□□□□ -0.37
SMARCA2-225ENST00000634688 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMARCA2-225ENST00000634688 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
SMARCA2-225ENST00000634688 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCA2-225ENST00000634688 RYDENQ9NUL5 291 aaKnown RBP12.7□□□□□ -0.38
SMARCA2-225ENST00000634688 PPP1R37O75864 691 aa12.67□□□□□ -0.38
SMARCA2-225ENST00000634688 HAP1P54257 671 aaPredicted RBP12.66□□□□□ -0.38
SMARCA2-225ENST00000634688 PBX2P40425 430 aa12.65□□□□□ -0.38
SMARCA2-225ENST00000634688 PLA2G2EQ9NZK7 142 aa12.63□□□□□ -0.39
SMARCA2-225ENST00000634688 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
SMARCA2-225ENST00000634688 NUDT7P0C024 238 aa12.58□□□□□ -0.4
SMARCA2-225ENST00000634688 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
SMARCA2-225ENST00000634688 HCSTQ9UBK5 93 aa12.58□□□□□ -0.4
SMARCA2-225ENST00000634688 KIF3CO14782 793 aa12.56□□□□□ -0.4
SMARCA2-225ENST00000634688 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
SMARCA2-225ENST00000634688 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
SMARCA2-225ENST00000634688 C2orf72A6NCS6 295 aa12.52□□□□□ -0.41
SMARCA2-225ENST00000634688 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
SMARCA2-225ENST00000634688 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
SMARCA2-225ENST00000634688 SLC34A2O95436 690 aa12.49□□□□□ -0.41
SMARCA2-225ENST00000634688 ADGRD1Q6QNK2 874 aa12.49□□□□□ -0.41
SMARCA2-225ENST00000634688 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
SMARCA2-225ENST00000634688 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
SMARCA2-225ENST00000634688 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
SMARCA2-225ENST00000634688 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
SMARCA2-225ENST00000634688 TK2O00142 265 aa12.39□□□□□ -0.43
SMARCA2-225ENST00000634688 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
SMARCA2-225ENST00000634688 HRO43593 1189 aa12.37□□□□□ -0.43
SMARCA2-225ENST00000634688 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
SMARCA2-225ENST00000634688 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
SMARCA2-225ENST00000634688 DMRTA1Q5VZB9 504 aa12.34□□□□□ -0.43
SMARCA2-225ENST00000634688 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
SMARCA2-225ENST00000634688 LARP6Q9BRS8 491 aaKnown RBP12.34□□□□□ -0.43
SMARCA2-225ENST00000634688 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
SMARCA2-225ENST00000634688 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
SMARCA2-225ENST00000634688 PDE4AP27815 886 aa12.32□□□□□ -0.44
SMARCA2-225ENST00000634688 PSEN2P49810 448 aa12.32□□□□□ -0.44
SMARCA2-225ENST00000634688 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
SMARCA2-225ENST00000634688 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
SMARCA2-225ENST00000634688 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
SMARCA2-225ENST00000634688 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
SMARCA2-225ENST00000634688 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.45
SMARCA2-225ENST00000634688 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
SMARCA2-225ENST00000634688 DSG2Q14126 1118 aa12.26□□□□□ -0.45
SMARCA2-225ENST00000634688 PPP4R3BQ5MIZ7 849 aa12.25□□□□□ -0.45
SMARCA2-225ENST00000634688 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
SMARCA2-225ENST00000634688 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
SMARCA2-225ENST00000634688 RGS20O76081 388 aa12.23□□□□□ -0.45
SMARCA2-225ENST00000634688 NACADO15069 1562 aa12.22□□□□□ -0.45
SMARCA2-225ENST00000634688 MFSD10Q14728 455 aa12.22□□□□□ -0.45
SMARCA2-225ENST00000634688 FOXK1P85037 733 aa12.21□□□□□ -0.45
SMARCA2-225ENST00000634688 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
SMARCA2-225ENST00000634688 IFFO2Q5TF58 517 aa12.19□□□□□ -0.46
SMARCA2-225ENST00000634688 PTPN5P54829 565 aa12.17□□□□□ -0.46
SMARCA2-225ENST00000634688 KCNH8Q96L42 1107 aa12.17□□□□□ -0.46
SMARCA2-225ENST00000634688 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
SMARCA2-225ENST00000634688 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
SMARCA2-225ENST00000634688 E2F4Q16254 413 aa12.15□□□□□ -0.46
SMARCA2-225ENST00000634688 VPS9D1Q9Y2B5 631 aa12.15□□□□□ -0.46
SMARCA2-225ENST00000634688 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
SMARCA2-225ENST00000634688 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
SMARCA2-225ENST00000634688 TBC1D12O60347 775 aa12.12□□□□□ -0.47
SMARCA2-225ENST00000634688 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCA2-225ENST00000634688 A0A0G2JS52 829 aa12.1□□□□□ -0.47
SMARCA2-225ENST00000634688 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
SMARCA2-225ENST00000634688 CAMK2BQ13554 666 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms