RNA–Protein interactions for RNA: ENST00000633295.1

LINC01002-225, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-225ENST00000633295 MAP3K13O43283 966 aa14.51□□□□□ -0.09
LINC01002-225ENST00000633295 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
LINC01002-225ENST00000633295 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
LINC01002-225ENST00000633295 FLIIQ13045 1269 aa14.5□□□□□ -0.09
LINC01002-225ENST00000633295 POTEHQ6S545 545 aa14.49□□□□□ -0.09
LINC01002-225ENST00000633295 DDRGK1Q96HY6 314 aa14.49□□□□□ -0.09
LINC01002-225ENST00000633295 C1orf115Q9H7X2 142 aa14.48□□□□□ -0.09
LINC01002-225ENST00000633295 HRCP23327 699 aa14.46□□□□□ -0.09
LINC01002-225ENST00000633295 PDIA6Q15084 440 aa14.46□□□□□ -0.09
LINC01002-225ENST00000633295 PPP1R15BQ5SWA1 713 aa14.46□□□□□ -0.09
LINC01002-225ENST00000633295 FAM117AQ9C073 453 aa14.46□□□□□ -0.09
LINC01002-225ENST00000633295 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
LINC01002-225ENST00000633295 ARID3AQ99856 593 aa14.45□□□□□ -0.1
LINC01002-225ENST00000633295 GPR37O15354 613 aa14.44□□□□□ -0.1
LINC01002-225ENST00000633295 MINK1Q8N4C8 1332 aaPredicted RBP14.43□□□□□ -0.1
LINC01002-225ENST00000633295 GPHNQ9NQX3 736 aaPredicted RBP14.42□□□□□ -0.1
LINC01002-225ENST00000633295 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
LINC01002-225ENST00000633295 DPYSL4O14531 572 aa14.39□□□□□ -0.11
LINC01002-225ENST00000633295 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
LINC01002-225ENST00000633295 AMHR2Q16671 573 aa14.39□□□□□ -0.11
LINC01002-225ENST00000633295 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
LINC01002-225ENST00000633295 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
LINC01002-225ENST00000633295 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
LINC01002-225ENST00000633295 APBB1O00213 710 aa14.37□□□□□ -0.11
LINC01002-225ENST00000633295 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
LINC01002-225ENST00000633295 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
LINC01002-225ENST00000633295 CCDC102AQ96A19 550 aa14.33□□□□□ -0.12
LINC01002-225ENST00000633295 A6NJR5 290 aa14.32□□□□□ -0.12
LINC01002-225ENST00000633295 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
LINC01002-225ENST00000633295 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
LINC01002-225ENST00000633295 PARP9Q8IXQ6 854 aa14.31□□□□□ -0.12
LINC01002-225ENST00000633295 IRF6O14896 467 aa14.3□□□□□ -0.12
LINC01002-225ENST00000633295 PDIA4P13667 645 aaKnown RBP14.29□□□□□ -0.12
LINC01002-225ENST00000633295 ZBTB7CA1YPR0 619 aa14.27□□□□□ -0.13
LINC01002-225ENST00000633295 TMEM106CQ9BVX2 250 aa14.27□□□□□ -0.13
LINC01002-225ENST00000633295 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
LINC01002-225ENST00000633295 GNPATO15228 680 aa14.24□□□□□ -0.13
LINC01002-225ENST00000633295 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC01002-225ENST00000633295 DSG2Q14126 1118 aa14.23□□□□□ -0.13
LINC01002-225ENST00000633295 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
LINC01002-225ENST00000633295 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
LINC01002-225ENST00000633295 TRAK2O60296 914 aa14.22□□□□□ -0.13
LINC01002-225ENST00000633295 HIC1Q14526 733 aa14.22□□□□□ -0.13
LINC01002-225ENST00000633295 FOXK1P85037 733 aa14.21□□□□□ -0.13
LINC01002-225ENST00000633295 CCDC82Q8N4S0 544 aa14.19□□□□□ -0.14
LINC01002-225ENST00000633295 PCMTD1Q96MG8 357 aaPredicted RBP14.19□□□□□ -0.14
LINC01002-225ENST00000633295 FCHSD2O94868 740 aa14.17□□□□□ -0.14
LINC01002-225ENST00000633295 TMC2Q8TDI7 906 aa14.16□□□□□ -0.14
LINC01002-225ENST00000633295 TTLL12Q14166 644 aaPredicted RBP14.15□□□□□ -0.14
LINC01002-225ENST00000633295 ZRANB1Q9UGI0 708 aa14.15□□□□□ -0.14
LINC01002-225ENST00000633295 GRXCR2A6NFK2 248 aa14.14□□□□□ -0.15
LINC01002-225ENST00000633295 CLUAP1Q96AJ1 413 aa14.13□□□□□ -0.15
LINC01002-225ENST00000633295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC01002-225ENST00000633295 OSBPP22059 807 aa14.12□□□□□ -0.15
LINC01002-225ENST00000633295 MCM6Q14566 821 aa14.12□□□□□ -0.15
LINC01002-225ENST00000633295 PHF12Q96QT6 1004 aa14.11□□□□□ -0.15
LINC01002-225ENST00000633295 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
LINC01002-225ENST00000633295 PTGER2P43116 358 aa14.09□□□□□ -0.15
LINC01002-225ENST00000633295 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
LINC01002-225ENST00000633295 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
LINC01002-225ENST00000633295 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
LINC01002-225ENST00000633295 MICALL2Q8IY33 904 aa14.08□□□□□ -0.16
LINC01002-225ENST00000633295 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
LINC01002-225ENST00000633295 MS4A1P11836 297 aa14.06□□□□□ -0.16
LINC01002-225ENST00000633295 FECHP22830 423 aa14.06□□□□□ -0.16
LINC01002-225ENST00000633295 TIE1P35590 1138 aa14.06□□□□□ -0.16
LINC01002-225ENST00000633295 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
LINC01002-225ENST00000633295 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
LINC01002-225ENST00000633295 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
LINC01002-225ENST00000633295 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
LINC01002-225ENST00000633295 MS4A3Q96HJ5 214 aa14.02□□□□□ -0.17
LINC01002-225ENST00000633295 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.17
LINC01002-225ENST00000633295 PTGDRQ13258 359 aa14.01□□□□□ -0.17
LINC01002-225ENST00000633295 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
LINC01002-225ENST00000633295 KIF3CO14782 793 aa14□□□□□ -0.17
LINC01002-225ENST00000633295 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
LINC01002-225ENST00000633295 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
LINC01002-225ENST00000633295 OXER1Q8TDS5 423 aa13.98□□□□□ -0.17
LINC01002-225ENST00000633295 CLCN1P35523 988 aa13.97□□□□□ -0.17
LINC01002-225ENST00000633295 SKIV2LQ15477 1246 aaKnown RBP13.97□□□□□ -0.17
LINC01002-225ENST00000633295 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
LINC01002-225ENST00000633295 TMUB1Q9BVT8 246 aa13.97□□□□□ -0.17
LINC01002-225ENST00000633295 C2orf72A6NCS6 295 aa13.96□□□□□ -0.17
LINC01002-225ENST00000633295 RAD21O60216 631 aa13.96□□□□□ -0.17
LINC01002-225ENST00000633295 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
LINC01002-225ENST00000633295 REPIN1Q9BWE0 567 aaKnown RBP13.95□□□□□ -0.18
LINC01002-225ENST00000633295 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
LINC01002-225ENST00000633295 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
LINC01002-225ENST00000633295 DDX12PQ92771 950 aa13.93□□□□□ -0.18
LINC01002-225ENST00000633295 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
LINC01002-225ENST00000633295 GPCPD1Q9NPB8 672 aa13.92□□□□□ -0.18
LINC01002-225ENST00000633295 TBC1D12O60347 775 aa13.9□□□□□ -0.18
LINC01002-225ENST00000633295 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
LINC01002-225ENST00000633295 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC01002-225ENST00000633295 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
LINC01002-225ENST00000633295 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
LINC01002-225ENST00000633295 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
LINC01002-225ENST00000633295 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
LINC01002-225ENST00000633295 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
LINC01002-225ENST00000633295 BOLA1Q9Y3E2 137 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms