RNA–Protein interactions for RNA: ENST00000632331.1

LINC01090-203, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 466 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-203ENST00000632331 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
LINC01090-203ENST00000632331 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
LINC01090-203ENST00000632331 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
LINC01090-203ENST00000632331 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
LINC01090-203ENST00000632331 ERBB3P21860 1342 aa10.39□□□□□ -0.75
LINC01090-203ENST00000632331 PPP1R37O75864 691 aa10.38□□□□□ -0.75
LINC01090-203ENST00000632331 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
LINC01090-203ENST00000632331 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
LINC01090-203ENST00000632331 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
LINC01090-203ENST00000632331 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
LINC01090-203ENST00000632331 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
LINC01090-203ENST00000632331 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
LINC01090-203ENST00000632331 ARSIQ5FYB1 569 aa10.33□□□□□ -0.76
LINC01090-203ENST00000632331 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
LINC01090-203ENST00000632331 GPR153Q6NV75 609 aa10.31□□□□□ -0.76
LINC01090-203ENST00000632331 KIF3CO14782 793 aa10.29□□□□□ -0.76
LINC01090-203ENST00000632331 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
LINC01090-203ENST00000632331 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.767e-7■■■□□ 16.8
LINC01090-203ENST00000632331 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
LINC01090-203ENST00000632331 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
LINC01090-203ENST00000632331 KRTAP3-3Q9BYR6 98 aa10.25□□□□□ -0.77
LINC01090-203ENST00000632331 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
LINC01090-203ENST00000632331 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
LINC01090-203ENST00000632331 NUDT7P0C024 238 aa10.22□□□□□ -0.77
LINC01090-203ENST00000632331 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.77
LINC01090-203ENST00000632331 ZNF316A6NFI3 1004 aaPredicted RBP10.2□□□□□ -0.78
LINC01090-203ENST00000632331 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
LINC01090-203ENST00000632331 PLPP6Q8IY26 295 aa10.19□□□□□ -0.78
LINC01090-203ENST00000632331 GPHNQ9NQX3 736 aaPredicted RBP10.19□□□□□ -0.78
LINC01090-203ENST00000632331 SLC34A2O95436 690 aa10.18□□□□□ -0.78
LINC01090-203ENST00000632331 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
LINC01090-203ENST00000632331 FOXK1P85037 733 aa10.16□□□□□ -0.78
LINC01090-203ENST00000632331 DSG2Q14126 1118 aa10.16□□□□□ -0.78
LINC01090-203ENST00000632331 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
LINC01090-203ENST00000632331 ANKRD13DQ6ZTN6 518 aa10.13□□□□□ -0.79
LINC01090-203ENST00000632331 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
LINC01090-203ENST00000632331 TBC1D12O60347 775 aa10.12□□□□□ -0.79
LINC01090-203ENST00000632331 PTCD2Q8WV60 388 aaKnown RBP10.1□□□□□ -0.79
LINC01090-203ENST00000632331 PDE4AP27815 886 aa10.08□□□□□ -0.8
LINC01090-203ENST00000632331 UPF1Q92900 1129 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC01090-203ENST00000632331 PPP1R15BQ5SWA1 713 aa10.07□□□□□ -0.8
LINC01090-203ENST00000632331 AXIN2Q9Y2T1 843 aa10.07□□□□□ -0.8
LINC01090-203ENST00000632331 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
LINC01090-203ENST00000632331 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
LINC01090-203ENST00000632331 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
LINC01090-203ENST00000632331 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
LINC01090-203ENST00000632331 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
LINC01090-203ENST00000632331 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
LINC01090-203ENST00000632331 PBX2P40425 430 aa10.03□□□□□ -0.8
LINC01090-203ENST00000632331 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
LINC01090-203ENST00000632331 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
LINC01090-203ENST00000632331 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
LINC01090-203ENST00000632331 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
LINC01090-203ENST00000632331 KDM4FA0A1W2PPD8 638 aa9.99□□□□□ -0.81
LINC01090-203ENST00000632331 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
LINC01090-203ENST00000632331 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
LINC01090-203ENST00000632331 PTGER2P43116 358 aa9.98□□□□□ -0.81
LINC01090-203ENST00000632331 POTEEQ6S8J3 1075 aa9.98□□□□□ -0.81
LINC01090-203ENST00000632331 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
LINC01090-203ENST00000632331 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
LINC01090-203ENST00000632331 RTN4Q9NQC3 1192 aaKnown RBP9.96□□□□□ -0.82
LINC01090-203ENST00000632331 PSEN2P49810 448 aa9.95□□□□□ -0.82
LINC01090-203ENST00000632331 MAP3K9P80192 1104 aa9.95□□□□□ -0.82
LINC01090-203ENST00000632331 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
LINC01090-203ENST00000632331 ZNF454Q8N9F8 522 aa9.94□□□□□ -0.82
LINC01090-203ENST00000632331 KCNK17Q96T54 332 aa9.93□□□□□ -0.82
LINC01090-203ENST00000632331 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.93□□□□□ -0.82
LINC01090-203ENST00000632331 EVI5O60447 810 aa9.92□□□□□ -0.82
LINC01090-203ENST00000632331 ADGRD1Q6QNK2 874 aa9.92□□□□□ -0.82
LINC01090-203ENST00000632331 DMRTA1Q5VZB9 504 aa9.91□□□□□ -0.82
LINC01090-203ENST00000632331 STAC3Q96MF2 364 aa9.91□□□□□ -0.82
LINC01090-203ENST00000632331 MFSD10Q14728 455 aa9.9□□□□□ -0.82
LINC01090-203ENST00000632331 SPRYD3Q8NCJ5 442 aa9.9□□□□□ -0.82
LINC01090-203ENST00000632331 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
LINC01090-203ENST00000632331 EMILIN3Q9NT22 766 aa9.86□□□□□ -0.83
LINC01090-203ENST00000632331 TK2O00142 265 aa9.85□□□□□ -0.83
LINC01090-203ENST00000632331 FOSBP53539 338 aa9.85□□□□□ -0.83
LINC01090-203ENST00000632331 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
LINC01090-203ENST00000632331 PTPREP23469 700 aa9.84□□□□□ -0.83
LINC01090-203ENST00000632331 PAXIP1Q6ZW49 1069 aaPredicted RBP9.84□□□□□ -0.83
LINC01090-203ENST00000632331 ZDHHC16Q969W1 377 aa9.83□□□□□ -0.84
LINC01090-203ENST00000632331 JPH4Q96JJ6 628 aa9.83□□□□□ -0.84
LINC01090-203ENST00000632331 BCL2L12Q9HB09 334 aa9.83□□□□□ -0.84
LINC01090-203ENST00000632331 DPYSL4O14531 572 aa9.79□□□□□ -0.84
LINC01090-203ENST00000632331 HRO43593 1189 aa9.79□□□□□ -0.84
LINC01090-203ENST00000632331 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
LINC01090-203ENST00000632331 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
LINC01090-203ENST00000632331 KCTD12Q96CX2 325 aaKnown RBP9.78□□□□□ -0.84
LINC01090-203ENST00000632331 HCSTQ9UBK5 93 aa9.78□□□□□ -0.84
LINC01090-203ENST00000632331 WDR70Q9NW82 654 aa9.76□□□□□ -0.85
LINC01090-203ENST00000632331 PCDHGA10Q9Y5H3 936 aa9.76□□□□□ -0.85
LINC01090-203ENST00000632331 GOLGA8CPA6NN73 597 aa9.75□□□□□ -0.85
LINC01090-203ENST00000632331 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
LINC01090-203ENST00000632331 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
LINC01090-203ENST00000632331 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
LINC01090-203ENST00000632331 PHF14O94880 888 aa9.72□□□□□ -0.85
LINC01090-203ENST00000632331 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
LINC01090-203ENST00000632331 DDX12PQ92771 950 aa9.72□□□□□ -0.85
LINC01090-203ENST00000632331 ZBED2Q9BTP6 218 aa9.72□□□□□ -0.85
LINC01090-203ENST00000632331 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms