RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CUX2O14529 1486 aa8.33□□□□□ -1.08
CDRT1-208ENST00000630868 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
CDRT1-208ENST00000630868 GPIHBP1Q8IV16 184 aa8.33□□□□□ -1.08
CDRT1-208ENST00000630868 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
CDRT1-208ENST00000630868 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
CDRT1-208ENST00000630868 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
CDRT1-208ENST00000630868 MS4A4AQ96JQ5 239 aa8.32□□□□□ -1.08
CDRT1-208ENST00000630868 DDX27Q96GQ7 796 aaKnown RBP8.31□□□□□ -1.08
CDRT1-208ENST00000630868 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
CDRT1-208ENST00000630868 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
CDRT1-208ENST00000630868 PDE4AP27815 886 aa8.3□□□□□ -1.08
CDRT1-208ENST00000630868 TRIM66O15016 1216 aa8.29□□□□□ -1.08
CDRT1-208ENST00000630868 PDE4DQ08499 809 aa8.28□□□□□ -1.08
CDRT1-208ENST00000630868 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
CDRT1-208ENST00000630868 MKRN3Q13064 507 aaKnown RBP8.27□□□□□ -1.09
CDRT1-208ENST00000630868 NCAPD3P42695 1498 aa8.26□□□□□ -1.09
CDRT1-208ENST00000630868 MAP3K13O43283 966 aa8.26□□□□□ -1.09
CDRT1-208ENST00000630868 ARID3AQ99856 593 aa8.26□□□□□ -1.09
CDRT1-208ENST00000630868 HRCP23327 699 aa8.25□□□□□ -1.09
CDRT1-208ENST00000630868 RANGAP1P46060 587 aaPredicted RBP8.25□□□□□ -1.09
CDRT1-208ENST00000630868 GPR37O15354 613 aa8.24□□□□□ -1.09
CDRT1-208ENST00000630868 KIF12Q96FN5 646 aa8.23□□□□□ -1.09
CDRT1-208ENST00000630868 FAM117AQ9C073 453 aa8.23□□□□□ -1.09
CDRT1-208ENST00000630868 ERCC6Q03468 1493 aa8.22□□□□□ -1.09
CDRT1-208ENST00000630868 PLEKHG3A1L390 1219 aa8.2□□□□□ -1.1
CDRT1-208ENST00000630868 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
CDRT1-208ENST00000630868 DPYSL4O14531 572 aa8.19□□□□□ -1.1
CDRT1-208ENST00000630868 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
CDRT1-208ENST00000630868 ATAD2BQ9ULI0 1458 aa8.19□□□□□ -1.1
CDRT1-208ENST00000630868 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
CDRT1-208ENST00000630868 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
CDRT1-208ENST00000630868 HMGXB3Q12766 1538 aa8.18□□□□□ -1.1
CDRT1-208ENST00000630868 PDIA6Q15084 440 aa8.17□□□□□ -1.1
CDRT1-208ENST00000630868 PRKAR2AP13861 404 aaKnown RBP8.16□□□□□ -1.1
CDRT1-208ENST00000630868 PAK3O75914 559 aaPredicted RBP8.15□□□□□ -1.1
CDRT1-208ENST00000630868 CCDC102AQ96A19 550 aa8.15□□□□□ -1.1
CDRT1-208ENST00000630868 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
CDRT1-208ENST00000630868 APBB1O00213 710 aa8.14□□□□□ -1.11
CDRT1-208ENST00000630868 NESP48681 1621 aa8.14□□□□□ -1.11
CDRT1-208ENST00000630868 ONECUT3O60422 494 aaPredicted RBP8.13□□□□□ -1.11
CDRT1-208ENST00000630868 PARP9Q8IXQ6 854 aa8.13□□□□□ -1.11
CDRT1-208ENST00000630868 GPHNQ9NQX3 736 aaPredicted RBP8.13□□□□□ -1.11
CDRT1-208ENST00000630868 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
CDRT1-208ENST00000630868 NPM2Q86SE8 214 aaKnown RBP8.12□□□□□ -1.11
CDRT1-208ENST00000630868 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
CDRT1-208ENST00000630868 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
CDRT1-208ENST00000630868 THOC2Q8NI27 1593 aaKnown RBP8.11□□□□□ -1.11
CDRT1-208ENST00000630868 MAP2K5Q13163 448 aa8.11□□□□□ -1.11
CDRT1-208ENST00000630868 AMHR2Q16671 573 aa8.11□□□□□ -1.11
CDRT1-208ENST00000630868 MINK1Q8N4C8 1332 aaPredicted RBP8.1□□□□□ -1.11
CDRT1-208ENST00000630868 FLIIQ13045 1269 aa8.1□□□□□ -1.11
CDRT1-208ENST00000630868 DSG2Q14126 1118 aa8.1□□□□□ -1.11
CDRT1-208ENST00000630868 GOLGA2Q08379 1002 aa8.09□□□□□ -1.11
CDRT1-208ENST00000630868 PHF12Q96QT6 1004 aa8.09□□□□□ -1.11
CDRT1-208ENST00000630868 TMEM106CQ9BVX2 250 aa8.09□□□□□ -1.11
CDRT1-208ENST00000630868 TRPC6Q9Y210 931 aa8.09□□□□□ -1.11
CDRT1-208ENST00000630868 PEG3Q9GZU2 1588 aa8.09□□□□□ -1.11
CDRT1-208ENST00000630868 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
CDRT1-208ENST00000630868 LAMC3Q9Y6N6 1575 aa8.07□□□□□ -1.12
CDRT1-208ENST00000630868 IRF6O14896 467 aa8.07□□□□□ -1.12
CDRT1-208ENST00000630868 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
CDRT1-208ENST00000630868 CLUAP1Q96AJ1 413 aa8.07□□□□□ -1.12
CDRT1-208ENST00000630868 NUTM2FA1L443 756 aa8.06□□□□□ -1.12
CDRT1-208ENST00000630868 FXR2P51116 673 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDRT1-208ENST00000630868 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
CDRT1-208ENST00000630868 FECHP22830 423 aa8.05□□□□□ -1.12
CDRT1-208ENST00000630868 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
CDRT1-208ENST00000630868 NECTIN2Q92692 538 aa8.05□□□□□ -1.12
CDRT1-208ENST00000630868 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CDRT1-208ENST00000630868 A6NJR5 290 aa8.04□□□□□ -1.12
CDRT1-208ENST00000630868 PDS5BQ9NTI5 1447 aa8.03□□□□□ -1.12
CDRT1-208ENST00000630868 GNPATO15228 680 aa8.03□□□□□ -1.12
CDRT1-208ENST00000630868 TRAK2O60296 914 aa8.03□□□□□ -1.12
CDRT1-208ENST00000630868 GOPCQ9HD26 462 aa8.03□□□□□ -1.12
CDRT1-208ENST00000630868 ZRANB1Q9UGI0 708 aa8.03□□□□□ -1.12
CDRT1-208ENST00000630868 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
CDRT1-208ENST00000630868 FOXK1P85037 733 aa8.02□□□□□ -1.13
CDRT1-208ENST00000630868 TTLL12Q14166 644 aaPredicted RBP8.02□□□□□ -1.13
CDRT1-208ENST00000630868 MS4A1P11836 297 aa8.01□□□□□ -1.13
CDRT1-208ENST00000630868 OSBPP22059 807 aa8.01□□□□□ -1.13
CDRT1-208ENST00000630868 MCM6Q14566 821 aa8.01□□□□□ -1.13
CDRT1-208ENST00000630868 KIF21AQ7Z4S6 1674 aa8.01□□□□□ -1.13
CDRT1-208ENST00000630868 GIGYF2Q6Y7W6 1299 aaKnown RBP8□□□□□ -1.13
CDRT1-208ENST00000630868 MS4A3Q96HJ5 214 aa8□□□□□ -1.13
CDRT1-208ENST00000630868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8□□□□□ -1.13
CDRT1-208ENST00000630868 ZBTB7CA1YPR0 619 aa7.99□□□□□ -1.13
CDRT1-208ENST00000630868 HIC1Q14526 733 aa7.99□□□□□ -1.13
CDRT1-208ENST00000630868 MICALL2Q8IY33 904 aa7.99□□□□□ -1.13
CDRT1-208ENST00000630868 CADPSQ9ULU8 1353 aa7.98□□□□□ -1.13
CDRT1-208ENST00000630868 PRIM1P49642 420 aaKnown RBP7.98□□□□□ -1.13
CDRT1-208ENST00000630868 DPY19L2Q6NUT2 758 aa7.98□□□□□ -1.13
CDRT1-208ENST00000630868 PLPP6Q8IY26 295 aa7.98□□□□□ -1.13
CDRT1-208ENST00000630868 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
CDRT1-208ENST00000630868 PCMTD1Q96MG8 357 aaPredicted RBP7.98□□□□□ -1.13
CDRT1-208ENST00000630868 REPIN1Q9BWE0 567 aaKnown RBP7.98□□□□□ -1.13
CDRT1-208ENST00000630868 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
CDRT1-208ENST00000630868 FCHSD2O94868 740 aa7.97□□□□□ -1.13
CDRT1-208ENST00000630868 CD44P16070 742 aaKnown RBP7.97□□□□□ -1.13
CDRT1-208ENST00000630868 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
CDRT1-208ENST00000630868 MRC2Q9UBG0 1479 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms