RNA–Protein interactions for RNA: ENST00000630771.2

CCAR1-218, Transcript of cell division cycle and apoptosis regulator 1, human

TSL 5 BASIC

Gene CCAR1, Length 4,540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCAR1-218	ENST00000630771	TIAM1	Q13009	1591 aa		11.66	□□□□□ -0.54
CCAR1-218	ENST00000630771	FANCA	O15360	1455 aa		11.66	□□□□□ -0.54
CCAR1-218	ENST00000630771	PLCH2	O75038	1416 aa		11.66	□□□□□ -0.54
CCAR1-218	ENST00000630771	NEO1	Q92859	1461 aa		11.65	□□□□□ -0.54
CCAR1-218	ENST00000630771	TTC37	Q6PGP7	1564 aa		11.65	□□□□□ -0.54
CCAR1-218	ENST00000630771	KANK4	Q5T7N3	995 aa	Predicted RBP	11.64	□□□□□ -0.55
CCAR1-218	ENST00000630771	AKNA	Q7Z591	1439 aa		11.64	□□□□□ -0.55
CCAR1-218	ENST00000630771	LRRIQ1	Q96JM4	1722 aa		11.64	□□□□□ -0.55
CCAR1-218	ENST00000630771	LRRC9	Q6ZRR7	1453 aa		11.64	□□□□□ -0.55
CCAR1-218	ENST00000630771	CFAP74	Q9C0B2	1584 aa		11.63	□□□□□ -0.55
CCAR1-218	ENST00000630771	MAP3K1	Q13233	1512 aa		11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	ADGRL1	O94910	1474 aa		11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	NCOA2	Q15596	1464 aa		11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	RAPGEF3	O95398	923 aa		11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	MYO5C	Q9NQX4	1742 aa		11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	DENND4B	O75064	1496 aa	Predicted RBP	11.62	□□□□□ -0.55
CCAR1-218	ENST00000630771	SCAPER	Q9BY12	1400 aa		11.61	□□□□□ -0.55
CCAR1-218	ENST00000630771	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.59	□□□□□ -0.55
CCAR1-218	ENST00000630771	PPRC1	Q5VV67	1664 aa	Known RBP	11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	DIEXF	Q68CQ4	756 aa	Known RBP	11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	PLEKHH2	Q8IVE3	1493 aa		11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	ARAP3	Q8WWN8	1544 aa		11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	FAM50A	Q14320	339 aa	Known RBP	11.58	□□□□□ -0.56
CCAR1-218	ENST00000630771	ITSN2	Q9NZM3	1697 aa		11.56	□□□□□ -0.56
CCAR1-218	ENST00000630771	PREX2	Q70Z35	1606 aa		11.56	□□□□□ -0.56
CCAR1-218	ENST00000630771	CENPB	P07199	599 aa	Predicted RBP	11.56	□□□□□ -0.56
CCAR1-218	ENST00000630771	TSPY4	P0CV99	314 aa		11.56	□□□□□ -0.56
CCAR1-218	ENST00000630771	TSPY10	P0CW01	314 aa		11.56	□□□□□ -0.56
CCAR1-218	ENST00000630771	AFAP1	Q8N556	730 aa		11.55	□□□□□ -0.56
CCAR1-218	ENST00000630771	MYOM3	Q5VTT5	1437 aa		11.55	□□□□□ -0.56
CCAR1-218	ENST00000630771	SPAG9	O60271	1321 aa	Known RBP	11.54	□□□□□ -0.56
CCAR1-218	ENST00000630771	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.54	□□□□□ -0.56
CCAR1-218	ENST00000630771	ZNF518A	Q6AHZ1	1483 aa		11.54	□□□□□ -0.56
CCAR1-218	ENST00000630771	ZNF644	Q9H582	1327 aa	Predicted RBP	11.53	□□□□□ -0.56
CCAR1-218	ENST00000630771	RSPH4A	Q5TD94	716 aa		11.53	□□□□□ -0.56
CCAR1-218	ENST00000630771	POGZ	Q7Z3K3	1410 aa		11.53	□□□□□ -0.56
CCAR1-218	ENST00000630771	CDC42BPA	Q5VT25	1732 aa		11.52	□□□□□ -0.57
CCAR1-218	ENST00000630771	MIA2	Q96PC5	1412 aa		11.51	□□□□□ -0.57
CCAR1-218	ENST00000630771	CDC42BPB	Q9Y5S2	1711 aa		11.51	□□□□□ -0.57
CCAR1-218	ENST00000630771	KIAA1107	Q9UPP5	1409 aa		11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	SYCP2	Q9BX26	1530 aa		11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	ESF1	Q9H501	851 aa	Known RBP	11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	CAMSAP2	Q08AD1	1489 aa		11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	ABCC1	P33527	1531 aa		11.5	□□□□□ -0.57
CCAR1-218	ENST00000630771	ITGAE	P38570	1179 aa		11.49	□□□□□ -0.57
CCAR1-218	ENST00000630771	TRAPPC8	Q9Y2L5	1435 aa		11.49	□□□□□ -0.57
CCAR1-218	ENST00000630771	MLEC	Q14165	292 aa		11.49	□□□□□ -0.57
CCAR1-218	ENST00000630771	CCER1	Q8TC90	406 aa	Predicted RBP	11.48	□□□□□ -0.57
CCAR1-218	ENST00000630771	ZFYVE16	Q7Z3T8	1539 aa		11.48	□□□□□ -0.57
CCAR1-218	ENST00000630771	FGD6	Q6ZV73	1430 aa		11.48	□□□□□ -0.57
CCAR1-218	ENST00000630771	SAMD9L	Q8IVG5	1584 aa		11.48	□□□□□ -0.57
CCAR1-218	ENST00000630771	MAGI2	Q86UL8	1455 aa		11.48	□□□□□ -0.57
CCAR1-218	ENST00000630771	CCDC141	Q6ZP82	1450 aa		11.47	□□□□□ -0.57
CCAR1-218	ENST00000630771	CHIC2	Q9UKJ5	165 aa		11.46	□□□□□ -0.58
CCAR1-218	ENST00000630771	YEATS2	Q9ULM3	1422 aa		11.45	□□□□□ -0.58
CCAR1-218	ENST00000630771	ARHGEF12	Q9NZN5	1544 aa		11.44	□□□□□ -0.58
CCAR1-218	ENST00000630771	PLPPR3	Q6T4P5	718 aa		11.44	□□□□□ -0.58
CCAR1-218	ENST00000630771	ATP10A	O60312	1499 aa		11.44	□□□□□ -0.58
CCAR1-218	ENST00000630771	HECW2	Q9P2P5	1572 aa		11.44	□□□□□ -0.58
CCAR1-218	ENST00000630771	RICTOR	Q6R327	1708 aa		11.44	□□□□□ -0.58
CCAR1-218	ENST00000630771	PTPN23	Q9H3S7	1636 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	C9orf84	Q5VXU9	1444 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	ZMYM4	Q5VZL5	1548 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	MLH3	Q9UHC1	1453 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	FRMPD1	Q5SYB0	1578 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	ARHGEF40	Q8TER5	1519 aa		11.43	□□□□□ -0.58
CCAR1-218	ENST00000630771	ATP7A	Q04656	1500 aa		11.41	□□□□□ -0.58
CCAR1-218	ENST00000630771	KDM5C	P41229	1560 aa		11.41	□□□□□ -0.58
CCAR1-218	ENST00000630771	RRP7BP	Q9NSQ0	103 aa		11.4	□□□□□ -0.58
CCAR1-218	ENST00000630771	ANKRD30A	Q9BXX3	1397 aa		11.4	□□□□□ -0.58
CCAR1-218	ENST00000630771	MBD5	Q9P267	1494 aa		11.4	□□□□□ -0.58
CCAR1-218	ENST00000630771	GGT6	Q6P531	493 aa		11.4	□□□□□ -0.58
CCAR1-218	ENST00000630771	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.4	□□□□□ -0.58
CCAR1-218	ENST00000630771	ARHGEF5	Q12774	1597 aa		11.39	□□□□□ -0.59
CCAR1-218	ENST00000630771	KIF3B	O15066	747 aa		11.39	□□□□□ -0.59
CCAR1-218	ENST00000630771	DAPK1	P53355	1430 aa		11.39	□□□□□ -0.59
CCAR1-218	ENST00000630771	TCOF1	Q13428	1488 aa	Known RBP	11.38	□□□□□ -0.59
CCAR1-218	ENST00000630771	A2M	P01023	1474 aa		11.37	□□□□□ -0.59
CCAR1-218	ENST00000630771	ABCC5	O15440	1437 aa		11.37	□□□□□ -0.59
CCAR1-218	ENST00000630771	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.37	□□□□□ -0.59
CCAR1-218	ENST00000630771	KIF15	Q9NS87	1388 aa		11.36	□□□□□ -0.59
CCAR1-218	ENST00000630771	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	4e-7	■■■■■ 28
CCAR1-218	ENST00000630771	DIP2C	Q9Y2E4	1556 aa		11.35	□□□□□ -0.59
CCAR1-218	ENST00000630771	DHX29	Q7Z478	1369 aa	Known RBP	11.35	□□□□□ -0.59
CCAR1-218	ENST00000630771	ABCA6	Q8N139	1617 aa		11.34	□□□□□ -0.59
CCAR1-218	ENST00000630771	SHANK2	Q9UPX8	1470 aa		11.34	□□□□□ -0.59
CCAR1-218	ENST00000630771	DNMT1	P26358	1616 aa	Known RBP	11.34	□□□□□ -0.59
CCAR1-218	ENST00000630771	INO80	Q9ULG1	1556 aa	Predicted RBP	11.34	□□□□□ -0.59
CCAR1-218	ENST00000630771	KIDINS220	Q9ULH0	1771 aa		11.34	□□□□□ -0.59
CCAR1-218	ENST00000630771	MIER1	Q8N108	512 aa		11.33	□□□□□ -0.6
CCAR1-218	ENST00000630771	KDM4F	A0A1W2PPD8	638 aa		11.33	□□□□□ -0.6
CCAR1-218	ENST00000630771	KANK1	Q14678	1352 aa		11.33	□□□□□ -0.6
CCAR1-218	ENST00000630771	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
CCAR1-218	ENST00000630771	RRBP1	Q9P2E9	1410 aa	Known RBP	11.32	□□□□□ -0.6
CCAR1-218	ENST00000630771	WASHC2C	Q9Y4E1	1318 aa		11.32	□□□□□ -0.6
CCAR1-218	ENST00000630771	ADGB	Q8N7X0	1667 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms