RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
TCF4-273ENST00000630720 KIF14Q15058 1648 aa13.53□□□□□ -0.24
TCF4-273ENST00000630720 CD109Q6YHK3 1445 aa13.52□□□□□ -0.24
TCF4-273ENST00000630720 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
TCF4-273ENST00000630720 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.25
TCF4-273ENST00000630720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
TCF4-273ENST00000630720 TROQ12816 1431 aaPredicted RBP13.51□□□□□ -0.25
TCF4-273ENST00000630720 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
TCF4-273ENST00000630720 TTC37Q6PGP7 1564 aa13.51□□□□□ -0.25
TCF4-273ENST00000630720 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
TCF4-273ENST00000630720 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
TCF4-273ENST00000630720 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
TCF4-273ENST00000630720 COL17A1Q9UMD9 1497 aaPredicted RBP13.46□□□□□ -0.26
TCF4-273ENST00000630720 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
TCF4-273ENST00000630720 KDM6BO15054 1643 aa13.41□□□□□ -0.26
TCF4-273ENST00000630720 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
TCF4-273ENST00000630720 PLCH2O75038 1416 aa13.41□□□□□ -0.26
TCF4-273ENST00000630720 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
TCF4-273ENST00000630720 EHBP1L1Q8N3D4 1523 aa13.41□□□□□ -0.26
TCF4-273ENST00000630720 FANCAO15360 1455 aa13.4□□□□□ -0.26
TCF4-273ENST00000630720 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
TCF4-273ENST00000630720 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
TCF4-273ENST00000630720 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
TCF4-273ENST00000630720 ARHGAP5Q13017 1502 aa13.37□□□□□ -0.27
TCF4-273ENST00000630720 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
TCF4-273ENST00000630720 NCOA2Q15596 1464 aa13.37□□□□□ -0.27
TCF4-273ENST00000630720 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
TCF4-273ENST00000630720 NEO1Q92859 1461 aa13.37□□□□□ -0.27
TCF4-273ENST00000630720 RAPGEF3O95398 923 aa13.37□□□□□ -0.27
TCF4-273ENST00000630720 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
TCF4-273ENST00000630720 EFCAB2Q5VUJ9 269 aa13.36□□□□□ -0.27
TCF4-273ENST00000630720 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
TCF4-273ENST00000630720 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
TCF4-273ENST00000630720 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
TCF4-273ENST00000630720 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
TCF4-273ENST00000630720 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
TCF4-273ENST00000630720 ADGRL1O94910 1474 aa13.33□□□□□ -0.28
TCF4-273ENST00000630720 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
TCF4-273ENST00000630720 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
TCF4-273ENST00000630720 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
TCF4-273ENST00000630720 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
TCF4-273ENST00000630720 ARHGEF12Q9NZN5 1544 aa13.31□□□□□ -0.28
TCF4-273ENST00000630720 SAMD9LQ8IVG5 1584 aa13.31□□□□□ -0.28
TCF4-273ENST00000630720 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
TCF4-273ENST00000630720 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
TCF4-273ENST00000630720 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
TCF4-273ENST00000630720 RICTORQ6R327 1708 aa13.3□□□□□ -0.28
TCF4-273ENST00000630720 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
TCF4-273ENST00000630720 AFAP1Q8N556 730 aa13.29□□□□□ -0.28
TCF4-273ENST00000630720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
TCF4-273ENST00000630720 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
TCF4-273ENST00000630720 ABCC1P33527 1531 aa13.28□□□□□ -0.28
TCF4-273ENST00000630720 TRAPPC8Q9Y2L5 1435 aa13.28□□□□□ -0.28
TCF4-273ENST00000630720 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
TCF4-273ENST00000630720 ZBTB22O15209 634 aa13.27□□□□□ -0.29
TCF4-273ENST00000630720 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.29
TCF4-273ENST00000630720 MYOM3Q5VTT5 1437 aa13.25□□□□□ -0.29
TCF4-273ENST00000630720 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
TCF4-273ENST00000630720 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
TCF4-273ENST00000630720 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
TCF4-273ENST00000630720 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
TCF4-273ENST00000630720 MBD5Q9P267 1494 aa13.22□□□□□ -0.29
TCF4-273ENST00000630720 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
TCF4-273ENST00000630720 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.29
TCF4-273ENST00000630720 KDM5CP41229 1560 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
TCF4-273ENST00000630720 FAM50AQ14320 339 aaKnown RBP13.2□□□□□ -0.3
TCF4-273ENST00000630720 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
TCF4-273ENST00000630720 SIGLEC1Q9BZZ2 1709 aa13.18□□□□□ -0.3
TCF4-273ENST00000630720 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
TCF4-273ENST00000630720 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
TCF4-273ENST00000630720 ARHGEF40Q8TER5 1519 aa13.17□□□□□ -0.3
TCF4-273ENST00000630720 KIDINS220Q9ULH0 1771 aa13.16□□□□□ -0.3
TCF4-273ENST00000630720 SPAG9O60271 1321 aaKnown RBP13.16□□□□□ -0.3
TCF4-273ENST00000630720 ITGAEP38570 1179 aa13.16□□□□□ -0.3
TCF4-273ENST00000630720 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
TCF4-273ENST00000630720 RNF39Q9H2S5 420 aa13.15□□□□□ -0.3
TCF4-273ENST00000630720 ABCA6Q8N139 1617 aa13.15□□□□□ -0.3
TCF4-273ENST00000630720 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
TCF4-273ENST00000630720 MAGI2Q86UL8 1455 aa13.15□□□□□ -0.3
TCF4-273ENST00000630720 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
TCF4-273ENST00000630720 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
TCF4-273ENST00000630720 TCOF1Q13428 1488 aaKnown RBP13.14□□□□□ -0.31
TCF4-273ENST00000630720 ARHGEF5Q12774 1597 aa13.14□□□□□ -0.31
TCF4-273ENST00000630720 ATP7AQ04656 1500 aa13.14□□□□□ -0.31
TCF4-273ENST00000630720 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
TCF4-273ENST00000630720 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
TCF4-273ENST00000630720 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
TCF4-273ENST00000630720 ABCC5O15440 1437 aa13.12□□□□□ -0.31
TCF4-273ENST00000630720 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
TCF4-273ENST00000630720 ATP10AO60312 1499 aa13.12□□□□□ -0.31
TCF4-273ENST00000630720 MLECQ14165 292 aa13.11□□□□□ -0.31
TCF4-273ENST00000630720 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
TCF4-273ENST00000630720 DAPK1P53355 1430 aa13.1□□□□□ -0.31
TCF4-273ENST00000630720 TSPY4P0CV99 314 aa13.1□□□□□ -0.31
TCF4-273ENST00000630720 TSPY10P0CW01 314 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms