RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
TCF4-268ENST00000629387 IRX3P78415 501 aaPredicted RBP7.96□□□□□ -1.13
TCF4-268ENST00000629387 HSP90AA1P07900 732 aaKnown RBP7.96□□□□□ -1.14
TCF4-268ENST00000629387 CCDC180Q9P1Z9 1646 aa7.96□□□□□ -1.14
TCF4-268ENST00000629387 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
TCF4-268ENST00000629387 VGLL3A8MV65 326 aa7.95□□□□□ -1.14
TCF4-268ENST00000629387 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
TCF4-268ENST00000629387 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
TCF4-268ENST00000629387 ZNF622Q969S3 477 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■■□□ 17.7
TCF4-268ENST00000629387 MSH5O43196 834 aa7.93□□□□□ -1.14
TCF4-268ENST00000629387 DIEXFQ68CQ4 756 aaKnown RBP7.93□□□□□ -1.14
TCF4-268ENST00000629387 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
TCF4-268ENST00000629387 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
TCF4-268ENST00000629387 PLEKHD1A6NEE1 506 aa7.91□□□□□ -1.14
TCF4-268ENST00000629387 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.14
TCF4-268ENST00000629387 ZCCHC6Q5VYS8 1495 aaKnown RBP7.9□□□□□ -1.14
TCF4-268ENST00000629387 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
TCF4-268ENST00000629387 PHF14O94880 888 aa7.9□□□□□ -1.15
TCF4-268ENST00000629387 ZNF830Q96NB3 372 aaPredicted RBP7.9□□□□□ -1.15
TCF4-268ENST00000629387 CC2D1BQ5T0F9 858 aaKnown RBP7.89□□□□□ -1.15
TCF4-268ENST00000629387 RGS22Q8NE09 1264 aa7.89□□□□□ -1.15
TCF4-268ENST00000629387 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
TCF4-268ENST00000629387 E9PSI1 815 aa7.88□□□□□ -1.15
TCF4-268ENST00000629387 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
TCF4-268ENST00000629387 PKD2Q13563 968 aa7.87□□□□□ -1.15
TCF4-268ENST00000629387 DNTTIP2Q5QJE6 756 aaKnown RBP7.87□□□□□ -1.15
TCF4-268ENST00000629387 LAS1LQ9Y4W2 734 aaKnown RBP7.87□□□□□ -1.15
TCF4-268ENST00000629387 APBB1O00213 710 aa7.86□□□□□ -1.15
TCF4-268ENST00000629387 MPNDQ8N594 471 aa7.86□□□□□ -1.15
TCF4-268ENST00000629387 ATF5Q9Y2D1 282 aaPredicted RBP7.86□□□□□ -1.15
TCF4-268ENST00000629387 CALD1Q05682 793 aaKnown RBP7.85□□□□□ -1.15
TCF4-268ENST00000629387 TNNT2P45379 298 aaPredicted RBP7.84□□□□□ -1.15
TCF4-268ENST00000629387 AXDND1Q5T1B0 1012 aaPredicted RBP7.84□□□□□ -1.15
TCF4-268ENST00000629387 NOL8Q76FK4 1167 aaKnown RBP7.84□□□□□ -1.15
TCF4-268ENST00000629387 IFNLR1Q8IU57 520 aaPredicted RBP7.84□□□□□ -1.15
TCF4-268ENST00000629387 HSP90AB4PQ58FF6 505 aa7.83□□□□□ -1.16
TCF4-268ENST00000629387 TMTC2Q8N394 836 aa7.83□□□□□ -1.16
TCF4-268ENST00000629387 MAFGO15525 162 aa7.83□□□□□ -1.16
TCF4-268ENST00000629387 TMCO4Q5TGY1 634 aa7.82□□□□□ -1.16
TCF4-268ENST00000629387 SLC4A2P04920 1241 aa7.82□□□□□ -1.16
TCF4-268ENST00000629387 P3H3Q8IVL6 736 aa7.82□□□□□ -1.16
TCF4-268ENST00000629387 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
TCF4-268ENST00000629387 ARMCX6Q7L4S7 300 aa7.8□□□□□ -1.16
TCF4-268ENST00000629387 ATP1B4Q9UN42 357 aaPredicted RBP7.8□□□□□ -1.16
TCF4-268ENST00000629387 SCRIBQ14160 1630 aa7.79□□□□□ -1.16
TCF4-268ENST00000629387 KAT6BQ8WYB5 2073 aa7.79□□□□□ -1.16
TCF4-268ENST00000629387 MFAP1P55081 439 aaKnown RBP7.79□□□□□ -1.16
TCF4-268ENST00000629387 ZBTB12Q9Y330 459 aaPredicted RBP7.79□□□□□ -1.16
TCF4-268ENST00000629387 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
TCF4-268ENST00000629387 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
TCF4-268ENST00000629387 POLD1P28340 1107 aa7.78□□□□□ -1.16
TCF4-268ENST00000629387 PRDM4Q9UKN5 801 aa7.78□□□□□ -1.16
TCF4-268ENST00000629387 ZHX1Q9UKY1 873 aaPredicted RBP7.78□□□□□ -1.16
TCF4-268ENST00000629387 RB1CC1Q8TDY2 1594 aa7.77□□□□□ -1.17
TCF4-268ENST00000629387 BRD1O95696 1058 aa7.77□□□□□ -1.17
TCF4-268ENST00000629387 EXOC8Q8IYI6 725 aa7.77□□□□□ -1.17
TCF4-268ENST00000629387 GZF1Q9H116 711 aaPredicted RBP7.76□□□□□ -1.17
TCF4-268ENST00000629387 SMARCA5O60264 1052 aaPredicted RBP7.75□□□□□ -1.17
TCF4-268ENST00000629387 FANCIQ9NVI1 1328 aa7.75□□□□□ -1.17
TCF4-268ENST00000629387 CHGAP10645 457 aaKnown RBP7.75□□□□□ -1.17
TCF4-268ENST00000629387 SLC52A1Q9NWF4 448 aa7.75□□□□□ -1.17
TCF4-268ENST00000629387 LOC102724159A0A0B4J2E5 919 aa7.74□□□□□ -1.17
TCF4-268ENST00000629387 PWP2Q15269 919 aaKnown RBP7.74□□□□□ -1.17
TCF4-268ENST00000629387 RGL2O15211 777 aa7.74□□□□□ -1.17
TCF4-268ENST00000629387 RGL3Q3MIN7 710 aa7.73□□□□□ -1.17
TCF4-268ENST00000629387 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
TCF4-268ENST00000629387 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
TCF4-268ENST00000629387 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
TCF4-268ENST00000629387 TMEM51Q9NW97 253 aa7.72□□□□□ -1.17
TCF4-268ENST00000629387 VASPP50552 380 aaPredicted RBP7.72□□□□□ -1.17
TCF4-268ENST00000629387 SGSM3Q96HU1 749 aa7.72□□□□□ -1.17
TCF4-268ENST00000629387 NOP58Q9Y2X3 529 aaKnown RBP7.72□□□□□ -1.17
TCF4-268ENST00000629387 SPTY2D1Q68D10 685 aaPredicted RBP7.71□□□□□ -1.17
TCF4-268ENST00000629387 SH3BP1Q9Y3L3 701 aa7.71□□□□□ -1.17
TCF4-268ENST00000629387 FAM43AQ8N2R8 423 aa7.71□□□□□ -1.18
TCF4-268ENST00000629387 CECR2Q9BXF3 1484 aa7.7□□□□□ -1.18
TCF4-268ENST00000629387 FOSBP53539 338 aa7.7□□□□□ -1.18
TCF4-268ENST00000629387 ZNF513Q8N8E2 541 aaPredicted RBP7.7□□□□□ -1.18
TCF4-268ENST00000629387 SPINK5Q9NQ38 1064 aaPredicted RBP7.7□□□□□ -1.18
TCF4-268ENST00000629387 ECM2O94769 699 aaPredicted RBP7.7□□□□□ -1.18
TCF4-268ENST00000629387 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
TCF4-268ENST00000629387 PPP1R1BQ9UD71 204 aaPredicted RBP7.69□□□□□ -1.18
TCF4-268ENST00000629387 TTC36A6NLP5 189 aa7.69□□□□□ -1.18
TCF4-268ENST00000629387 GOLIM4O00461 696 aa7.69□□□□□ -1.18
TCF4-268ENST00000629387 ILDR1Q86SU0 546 aaPredicted RBP7.69□□□□□ -1.18
TCF4-268ENST00000629387 PIK3R5Q8WYR1 880 aa7.69□□□□□ -1.18
TCF4-268ENST00000629387 TRIM44Q96DX7 344 aaPredicted RBP7.69□□□□□ -1.18
TCF4-268ENST00000629387 RINLQ6ZS11 566 aa7.69□□□□□ -1.18
TCF4-268ENST00000629387 C11orf95C9JLR9 678 aaPredicted RBP7.68□□□□□ -1.18
TCF4-268ENST00000629387 MYH16Q9H6N6 1097 aa7.68□□□□□ -1.18
TCF4-268ENST00000629387 SPRYD3Q8NCJ5 442 aa7.68□□□□□ -1.18
TCF4-268ENST00000629387 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
TCF4-268ENST00000629387 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
TCF4-268ENST00000629387 RALBP1Q15311 655 aa7.67□□□□□ -1.18
TCF4-268ENST00000629387 CREBRFQ8IUR6 639 aa7.67□□□□□ -1.18
TCF4-268ENST00000629387 NBPF1Q3BBV0 1214 aa7.67□□□□□ -1.18
TCF4-268ENST00000629387 TAF3Q5VWG9 929 aa7.67□□□□□ -1.18
TCF4-268ENST00000629387 APBB1IPQ7Z5R6 666 aaPredicted RBP7.67□□□□□ -1.18
TCF4-268ENST00000629387 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
TCF4-268ENST00000629387 BANK1Q8NDB2 785 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 1290.8 ms