RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 MS4A4AQ96JQ5 239 aa5.25□□□□□ -1.57
SPTAN1-216ENST00000629047 NUDT7P0C024 238 aa5.22□□□□□ -1.57
SPTAN1-216ENST00000629047 VASPP50552 380 aaPredicted RBP5.21□□□□□ -1.58
SPTAN1-216ENST00000629047 HCSTQ9UBK5 93 aa5.2□□□□□ -1.58
SPTAN1-216ENST00000629047 CIZ1Q9ULV3 898 aaPredicted RBP5.2□□□□□ -1.58
SPTAN1-216ENST00000629047 LHX6Q9UPM6 363 aa5.2□□□□□ -1.58
SPTAN1-216ENST00000629047 PHF8Q9UPP1 1060 aa5.19□□□□□ -1.58
SPTAN1-216ENST00000629047 DMRTA1Q5VZB9 504 aa5.17□□□□□ -1.58
SPTAN1-216ENST00000629047 ADGRD1Q6QNK2 874 aa5.17□□□□□ -1.58
SPTAN1-216ENST00000629047 KCTD12Q96CX2 325 aaKnown RBP5.16□□□□□ -1.58
SPTAN1-216ENST00000629047 PBX2P40425 430 aa5.15□□□□□ -1.59
SPTAN1-216ENST00000629047 PSEN2P49810 448 aa5.14□□□□□ -1.59
SPTAN1-216ENST00000629047 IRX2Q9BZI1 471 aaPredicted RBP5.14□□□□□ -1.59
SPTAN1-216ENST00000629047 HRO43593 1189 aa5.13□□□□□ -1.59
SPTAN1-216ENST00000629047 IFNLR1Q8IU57 520 aaPredicted RBP5.13□□□□□ -1.59
SPTAN1-216ENST00000629047 C2orf72A6NCS6 295 aa5.12□□□□□ -1.59
SPTAN1-216ENST00000629047 RNF25Q96BH1 459 aaPredicted RBP5.12□□□□□ -1.59
SPTAN1-216ENST00000629047 FBXO3Q9UK99 471 aa5.12□□□□□ -1.59
SPTAN1-216ENST00000629047 PCDHGA4Q9Y5G9 962 aa5.12□□□□□ -1.59
SPTAN1-216ENST00000629047 KIF3CO14782 793 aa5.11□□□□□ -1.59
SPTAN1-216ENST00000629047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.1□□□□□ -1.59
SPTAN1-216ENST00000629047 PTPN5P54829 565 aa5.1□□□□□ -1.59
SPTAN1-216ENST00000629047 SPOCK2Q92563 424 aa5.1□□□□□ -1.59
SPTAN1-216ENST00000629047 ZFP91Q96JP5 570 aaPredicted RBP5.1□□□□□ -1.59
SPTAN1-216ENST00000629047 ARHGAP33O14559 1287 aa5.09□□□□□ -1.59
SPTAN1-216ENST00000629047 LCE2BO14633 110 aa5.08□□□□□ -1.6
SPTAN1-216ENST00000629047 SOX12O15370 315 aa5.08□□□□□ -1.6
SPTAN1-216ENST00000629047 FBXO22Q8NEZ5 403 aa5.08□□□□□ -1.6
SPTAN1-216ENST00000629047 A0A0G2JS52 829 aa5.07□□□□□ -1.6
SPTAN1-216ENST00000629047 KDM4FA0A1W2PPD8 638 aa5.05□□□□□ -1.6
SPTAN1-216ENST00000629047 TK2O00142 265 aa5.04□□□□□ -1.6
SPTAN1-216ENST00000629047 Q6ZNB5 142 aa5.03□□□□□ -1.6
SPTAN1-216ENST00000629047 MFRPQ9BY79 579 aa5.03□□□□□ -1.6
SPTAN1-216ENST00000629047 RIOK3O14730 519 aaKnown RBP5.02□□□□□ -1.61
SPTAN1-216ENST00000629047 SLC34A2O95436 690 aa5.02□□□□□ -1.61
SPTAN1-216ENST00000629047 KCNK17Q96T54 332 aa5.02□□□□□ -1.61
SPTAN1-216ENST00000629047 RGS20O76081 388 aa5□□□□□ -1.61
SPTAN1-216ENST00000629047 NLRP6P59044 892 aa5□□□□□ -1.61
SPTAN1-216ENST00000629047 THSD4Q6ZMP0 1018 aa5□□□□□ -1.61
SPTAN1-216ENST00000629047 VPS9D1Q9Y2B5 631 aa5□□□□□ -1.61
SPTAN1-216ENST00000629047 IFFO2Q5TF58 517 aa4.99□□□□□ -1.61
SPTAN1-216ENST00000629047 BCL11BQ9C0K0 894 aaPredicted RBP4.99□□□□□ -1.61
SPTAN1-216ENST00000629047 VGFO15240 615 aaPredicted RBP4.98□□□□□ -1.61
SPTAN1-216ENST00000629047 STAC3Q96MF2 364 aa4.97□□□□□ -1.61
SPTAN1-216ENST00000629047 PPP1R37O75864 691 aa4.96□□□□□ -1.62
SPTAN1-216ENST00000629047 PPP4R3BQ5MIZ7 849 aa4.96□□□□□ -1.62
SPTAN1-216ENST00000629047 TMC2Q8TDI7 906 aa4.96□□□□□ -1.62
SPTAN1-216ENST00000629047 PSDA5PKW4 1024 aaPredicted RBP4.95□□□□□ -1.62
SPTAN1-216ENST00000629047 STK24Q9Y6E0 443 aa4.95□□□□□ -1.62
SPTAN1-216ENST00000629047 TRIM41Q8WV44 630 aa4.94□□□□□ -1.62
SPTAN1-216ENST00000629047 PTCD2Q8WV60 388 aaKnown RBP4.94□□□□□ -1.62
SPTAN1-216ENST00000629047 WNT2BQ93097 391 aa4.94□□□□□ -1.62
SPTAN1-216ENST00000629047 BHMG1C9JSJ3 638 aaPredicted RBP4.93□□□□□ -1.62
SPTAN1-216ENST00000629047 PLPP6Q8IY26 295 aa4.91□□□□□ -1.62
SPTAN1-216ENST00000629047 ZNF454Q8N9F8 522 aa4.9□□□□□ -1.63
SPTAN1-216ENST00000629047 ZBED2Q9BTP6 218 aa4.9□□□□□ -1.63
SPTAN1-216ENST00000629047 GOLGA8CPA6NN73 597 aa4.89□□□□□ -1.63
SPTAN1-216ENST00000629047 BCAMP50895 628 aa4.89□□□□□ -1.63
SPTAN1-216ENST00000629047 TRAF7Q6Q0C0 670 aa4.89□□□□□ -1.63
SPTAN1-216ENST00000629047 STK25O00506 426 aa4.88□□□□□ -1.63
SPTAN1-216ENST00000629047 ITGBL1O95965 494 aaPredicted RBP4.88□□□□□ -1.63
SPTAN1-216ENST00000629047 DSG2Q14126 1118 aa4.88□□□□□ -1.63
SPTAN1-216ENST00000629047 MRPL50Q8N5N7 158 aaKnown RBP4.88□□□□□ -1.63
SPTAN1-216ENST00000629047 UPF1Q92900 1129 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPTAN1-216ENST00000629047 GFRA3O60609 400 aa4.87□□□□□ -1.63
SPTAN1-216ENST00000629047 BCL2L12Q9HB09 334 aa4.87□□□□□ -1.63
SPTAN1-216ENST00000629047 FOXK1P85037 733 aa4.86□□□□□ -1.63
SPTAN1-216ENST00000629047 KCNH8Q96L42 1107 aa4.86□□□□□ -1.63
SPTAN1-216ENST00000629047 SLC4A5Q9BY07 1137 aa4.86□□□□□ -1.63
SPTAN1-216ENST00000629047 PROX2Q3B8N5 592 aa4.85□□□□□ -1.63
SPTAN1-216ENST00000629047 ZNF775Q96BV0 537 aaPredicted RBP4.85□□□□□ -1.63
SPTAN1-216ENST00000629047 ADAM33Q9BZ11 813 aa4.85□□□□□ -1.63
SPTAN1-216ENST00000629047 FOSBP53539 338 aa4.84□□□□□ -1.63
SPTAN1-216ENST00000629047 PTPREP23469 700 aa4.83□□□□□ -1.64
SPTAN1-216ENST00000629047 OXER1Q8TDS5 423 aa4.83□□□□□ -1.64
SPTAN1-216ENST00000629047 WBP1LQ9NX94 342 aa4.83□□□□□ -1.64
SPTAN1-216ENST00000629047 ZNF787Q6DD87 383 aa4.82□□□□□ -1.64
SPTAN1-216ENST00000629047 COL9A1P20849 921 aa4.81□□□□□ -1.64
SPTAN1-216ENST00000629047 ANKK1Q8NFD2 765 aa4.81□□□□□ -1.64
SPTAN1-216ENST00000629047 NBPF3Q9H094 633 aa4.81□□□□□ -1.64
SPTAN1-216ENST00000629047 GPHNQ9NQX3 736 aaPredicted RBP4.81□□□□□ -1.64
SPTAN1-216ENST00000629047 KCNC4Q03721 635 aa4.8□□□□□ -1.64
SPTAN1-216ENST00000629047 TBC1D12O60347 775 aa4.79□□□□□ -1.64
SPTAN1-216ENST00000629047 LAPTM4AQ15012 233 aa4.79□□□□□ -1.64
SPTAN1-216ENST00000629047 PRKD2Q9BZL6 878 aa4.79□□□□□ -1.64
SPTAN1-216ENST00000629047 SEPT9Q9UHD8 586 aaPredicted RBP4.79□□□□□ -1.64
SPTAN1-216ENST00000629047 SOWAHBA6NEL2 793 aa4.78□□□□□ -1.64
SPTAN1-216ENST00000629047 NRG2O14511 850 aaPredicted RBP4.78□□□□□ -1.64
SPTAN1-216ENST00000629047 RGL2O15211 777 aa4.78□□□□□ -1.64
SPTAN1-216ENST00000629047 ZDHHC16Q969W1 377 aa4.77□□□□□ -1.65
SPTAN1-216ENST00000629047 JPH4Q96JJ6 628 aa4.77□□□□□ -1.65
SPTAN1-216ENST00000629047 POTECB2RU33 542 aa4.76□□□□□ -1.65
SPTAN1-216ENST00000629047 ZFRQ96KR1 1074 aaKnown RBP4.76□□□□□ -1.65
SPTAN1-216ENST00000629047 PPP1R3GB7ZBB8 358 aa4.75□□□□□ -1.65
SPTAN1-216ENST00000629047 RABGEF1Q9UJ41 708 aa4.75□□□□□ -1.65
SPTAN1-216ENST00000629047 EVI5O60447 810 aa4.74□□□□□ -1.65
SPTAN1-216ENST00000629047 KIAA1468Q9P260 1216 aa4.74□□□□□ -1.65
SPTAN1-216ENST00000629047 HPS5Q9UPZ3 1129 aa4.74□□□□□ -1.65
SPTAN1-216ENST00000629047 ECM2O94769 699 aaPredicted RBP4.73□□□□□ -1.65
SPTAN1-216ENST00000629047 ANO8Q9HCE9 1232 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms