RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 GPHNQ9NQX3 736 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-223ENST00000628857 CRISPLD2Q9H0B8 497 aa8.02□□□□□ -1.13
CNOT1-223ENST00000628857 TMC2Q8TDI7 906 aa8□□□□□ -1.13
CNOT1-223ENST00000628857 TMEM92Q6UXU6 159 aa7.99□□□□□ -1.13
CNOT1-223ENST00000628857 SLAIN1Q8ND83 568 aa7.99□□□□□ -1.13
CNOT1-223ENST00000628857 FOXK1P85037 733 aa7.98□□□□□ -1.13
CNOT1-223ENST00000628857 MFSD10Q14728 455 aa7.98□□□□□ -1.13
CNOT1-223ENST00000628857 TSHZ2Q9NRE2 1034 aa7.98□□□□□ -1.13
CNOT1-223ENST00000628857 NCKAP5LQ9HCH0 1330 aa7.98□□□□□ -1.13
CNOT1-223ENST00000628857 C2orf72A6NCS6 295 aa7.97□□□□□ -1.13
CNOT1-223ENST00000628857 SNPHO15079 494 aa7.97□□□□□ -1.13
CNOT1-223ENST00000628857 CADPS2Q86UW7 1296 aa7.97□□□□□ -1.13
CNOT1-223ENST00000628857 VSIG10Q8N0Z9 540 aa7.96□□□□□ -1.14
CNOT1-223ENST00000628857 SLC34A2O95436 690 aa7.94□□□□□ -1.14
CNOT1-223ENST00000628857 HAP1P54257 671 aaPredicted RBP7.94□□□□□ -1.14
CNOT1-223ENST00000628857 DDX27Q96GQ7 796 aaKnown RBP7.93□□□□□ -1.14
CNOT1-223ENST00000628857 LARP6Q9BRS8 491 aaKnown RBP7.93□□□□□ -1.14
CNOT1-223ENST00000628857 DSG2Q14126 1118 aa7.91□□□□□ -1.14
CNOT1-223ENST00000628857 PPP1R15BQ5SWA1 713 aa7.91□□□□□ -1.14
CNOT1-223ENST00000628857 ZSWIM6Q9HCJ5 1215 aa7.91□□□□□ -1.14
CNOT1-223ENST00000628857 WDR70Q9NW82 654 aa7.91□□□□□ -1.14
CNOT1-223ENST00000628857 CAMK2BQ13554 666 aa7.9□□□□□ -1.14
CNOT1-223ENST00000628857 DOK7Q18PE1 504 aa7.9□□□□□ -1.14
CNOT1-223ENST00000628857 PLPP6Q8IY26 295 aa7.9□□□□□ -1.14
CNOT1-223ENST00000628857 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
CNOT1-223ENST00000628857 PTCD2Q8WV60 388 aaKnown RBP7.88□□□□□ -1.15
CNOT1-223ENST00000628857 ARIH1Q9Y4X5 557 aaPredicted RBP7.88□□□□□ -1.15
CNOT1-223ENST00000628857 HOXB3P14651 431 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-223ENST00000628857 E2F4Q16254 413 aa7.86□□□□□ -1.15
CNOT1-223ENST00000628857 SLC24A1O60721 1099 aa7.85□□□□□ -1.15
CNOT1-223ENST00000628857 TBC1D12O60347 775 aa7.84□□□□□ -1.15
CNOT1-223ENST00000628857 OXER1Q8TDS5 423 aa7.84□□□□□ -1.15
CNOT1-223ENST00000628857 KDM2AQ9Y2K7 1162 aa7.84□□□□□ -1.15
CNOT1-223ENST00000628857 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
CNOT1-223ENST00000628857 ZNF710Q8N1W2 664 aa7.82□□□□□ -1.16
CNOT1-223ENST00000628857 HOXB1P14653 301 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-223ENST00000628857 GPR153Q6NV75 609 aa7.81□□□□□ -1.16
CNOT1-223ENST00000628857 ARHGEF1Q92888 912 aaKnown RBP7.8□□□□□ -1.16
CNOT1-223ENST00000628857 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
CNOT1-223ENST00000628857 PCDHGA4Q9Y5G9 962 aa7.79□□□□□ -1.16
CNOT1-223ENST00000628857 KDM4FA0A1W2PPD8 638 aa7.78□□□□□ -1.16
CNOT1-223ENST00000628857 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
CNOT1-223ENST00000628857 SPDYE16A6NNV3 312 aaPredicted RBP7.77□□□□□ -1.17
CNOT1-223ENST00000628857 ST18O60284 1047 aa7.77□□□□□ -1.17
CNOT1-223ENST00000628857 MAP3K9P80192 1104 aa7.76□□□□□ -1.17
CNOT1-223ENST00000628857 FAM163AQ96GL9 167 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-223ENST00000628857 ARSIQ5FYB1 569 aa7.74□□□□□ -1.17
CNOT1-223ENST00000628857 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
CNOT1-223ENST00000628857 PSDA5PKW4 1024 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-223ENST00000628857 ZNF316A6NFI3 1004 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-223ENST00000628857 PTGER2P43116 358 aa7.73□□□□□ -1.17
CNOT1-223ENST00000628857 PDIA6Q15084 440 aa7.73□□□□□ -1.17
CNOT1-223ENST00000628857 LCE2DQ5TA82 110 aaPredicted RBP7.73□□□□□ -1.17
CNOT1-223ENST00000628857 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.177e-7■□□□□ 10.3
CNOT1-223ENST00000628857 DPYSL4O14531 572 aa7.71□□□□□ -1.18
CNOT1-223ENST00000628857 EVI5O60447 810 aa7.71□□□□□ -1.18
CNOT1-223ENST00000628857 NUDT7P0C024 238 aa7.69□□□□□ -1.18
CNOT1-223ENST00000628857 EMP3P54852 163 aa7.67□□□□□ -1.18
CNOT1-223ENST00000628857 KHSRPQ92945 711 aaKnown RBP eCLIP7.66□□□□□ -1.182e-6■■■■□ 21.5
CNOT1-223ENST00000628857 JPH4Q96JJ6 628 aa7.66□□□□□ -1.18
CNOT1-223ENST00000628857 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
CNOT1-223ENST00000628857 PHF14O94880 888 aa7.65□□□□□ -1.18
CNOT1-223ENST00000628857 EPAS1Q99814 870 aa7.65□□□□□ -1.18
CNOT1-223ENST00000628857 ERBB3P21860 1342 aa7.64□□□□□ -1.19
CNOT1-223ENST00000628857 FOSBP53539 338 aa7.64□□□□□ -1.19
CNOT1-223ENST00000628857 FBXW7Q969H0 707 aa7.64□□□□□ -1.19
CNOT1-223ENST00000628857 PCDH10Q9P2E7 1040 aa7.64□□□□□ -1.19
CNOT1-223ENST00000628857 ZNF687Q8N1G0 1237 aa7.63□□□□□ -1.19
CNOT1-223ENST00000628857 MARVELD3Q96A59 401 aa7.63□□□□□ -1.19
CNOT1-223ENST00000628857 PPP4R3BQ5MIZ7 849 aa7.62□□□□□ -1.19
CNOT1-223ENST00000628857 SMYD5Q6GMV2 418 aa7.62□□□□□ -1.19
CNOT1-223ENST00000628857 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-223ENST00000628857 FAM205CA6NFA0 338 aa7.61□□□□□ -1.19
CNOT1-223ENST00000628857 TYW1BQ6NUM6 668 aa7.61□□□□□ -1.19
CNOT1-223ENST00000628857 POTEGQ6S5H5 508 aa7.61□□□□□ -1.19
CNOT1-223ENST00000628857 HS3ST6Q96QI5 342 aa7.61□□□□□ -1.19
CNOT1-223ENST00000628857 POTEMA6NI47 508 aa7.6□□□□□ -1.19
CNOT1-223ENST00000628857 PBX2P40425 430 aa7.6□□□□□ -1.19
CNOT1-223ENST00000628857 VARS2Q5ST30 1063 aaKnown RBP7.6□□□□□ -1.19
CNOT1-223ENST00000628857 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
CNOT1-223ENST00000628857 PCDHGA10Q9Y5H3 936 aa7.6□□□□□ -1.19
CNOT1-223ENST00000628857 ZNF454Q8N9F8 522 aa7.59□□□□□ -1.19
CNOT1-223ENST00000628857 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
CNOT1-223ENST00000628857 SEMA3EO15041 775 aa7.58□□□□□ -1.2
CNOT1-223ENST00000628857 NBR1Q14596 966 aa7.58□□□□□ -1.2
CNOT1-223ENST00000628857 OSBPP22059 807 aa7.57□□□□□ -1.2
CNOT1-223ENST00000628857 POTEB3A0JP26 581 aa7.56□□□□□ -1.2
CNOT1-223ENST00000628857 TULP1O00294 542 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-223ENST00000628857 POTEBQ6S5H4 581 aa7.56□□□□□ -1.2
CNOT1-223ENST00000628857 DDX12PQ92771 950 aa7.56□□□□□ -1.2
CNOT1-223ENST00000628857 ARHGAP33O14559 1287 aa7.55□□□□□ -1.2
CNOT1-223ENST00000628857 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-223ENST00000628857 BCANQ96GW7 911 aa7.55□□□□□ -1.2
CNOT1-223ENST00000628857 GRXCR2A6NFK2 248 aa7.54□□□□□ -1.2
CNOT1-223ENST00000628857 MLLT3P42568 568 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-223ENST00000628857 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
CNOT1-223ENST00000628857 PTPREP23469 700 aa7.53□□□□□ -1.2
CNOT1-223ENST00000628857 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
CNOT1-223ENST00000628857 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
CNOT1-223ENST00000628857 SLC4A5Q9BY07 1137 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms