RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 CLIP1P30622 1438 aa20.41■□□□□ 0.86
SOX2-OT-247ENST00000628347 CASKIN1Q8WXD9 1431 aa20.41■□□□□ 0.86
SOX2-OT-247ENST00000628347 SCAPERQ9BY12 1400 aa20.41■□□□□ 0.86
SOX2-OT-247ENST00000628347 ZFYVE16Q7Z3T8 1539 aa20.41■□□□□ 0.86
SOX2-OT-247ENST00000628347 MADDQ8WXG6 1647 aa20.4■□□□□ 0.86
SOX2-OT-247ENST00000628347 CCDC18Q5T9S5 1454 aa20.39■□□□□ 0.85
SOX2-OT-247ENST00000628347 ARID4BQ4LE39 1312 aaPredicted RBP20.39■□□□□ 0.85
SOX2-OT-247ENST00000628347 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
SOX2-OT-247ENST00000628347 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
SOX2-OT-247ENST00000628347 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
SOX2-OT-247ENST00000628347 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.85
SOX2-OT-247ENST00000628347 FYCO1Q9BQS8 1478 aa20.33■□□□□ 0.85
SOX2-OT-247ENST00000628347 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
SOX2-OT-247ENST00000628347 RIMS1Q86UR5 1692 aaKnown RBP20.32■□□□□ 0.84
SOX2-OT-247ENST00000628347 ZNF518AQ6AHZ1 1483 aa20.31■□□□□ 0.84
SOX2-OT-247ENST00000628347 ATP10AO60312 1499 aa20.3■□□□□ 0.84
SOX2-OT-247ENST00000628347 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
SOX2-OT-247ENST00000628347 KDM5CP41229 1560 aa20.3■□□□□ 0.84
SOX2-OT-247ENST00000628347 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
SOX2-OT-247ENST00000628347 C9orf84Q5VXU9 1444 aa20.28■□□□□ 0.84
SOX2-OT-247ENST00000628347 ABCC1P33527 1531 aa20.24■□□□□ 0.83
SOX2-OT-247ENST00000628347 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
SOX2-OT-247ENST00000628347 ARHGEF12Q9NZN5 1544 aa20.23■□□□□ 0.83
SOX2-OT-247ENST00000628347 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
SOX2-OT-247ENST00000628347 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
SOX2-OT-247ENST00000628347 MLH3Q9UHC1 1453 aa20.23■□□□□ 0.83
SOX2-OT-247ENST00000628347 CDC42BPAQ5VT25 1732 aa20.22■□□□□ 0.83
SOX2-OT-247ENST00000628347 REREQ9P2R6 1566 aa20.22■□□□□ 0.83
SOX2-OT-247ENST00000628347 ILDR1Q86SU0 546 aaPredicted RBP20.22■□□□□ 0.83
SOX2-OT-247ENST00000628347 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
SOX2-OT-247ENST00000628347 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
SOX2-OT-247ENST00000628347 MLECQ14165 292 aa20.19■□□□□ 0.82
SOX2-OT-247ENST00000628347 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
SOX2-OT-247ENST00000628347 ABCA6Q8N139 1617 aa20.16■□□□□ 0.82
SOX2-OT-247ENST00000628347 GPATCH8Q9UKJ3 1502 aaKnown RBP20.16■□□□□ 0.82
SOX2-OT-247ENST00000628347 AGLP35573 1532 aa20.14■□□□□ 0.81
SOX2-OT-247ENST00000628347 SAMD9LQ8IVG5 1584 aa20.13■□□□□ 0.81
SOX2-OT-247ENST00000628347 KIDINS220Q9ULH0 1771 aa20.13■□□□□ 0.81
SOX2-OT-247ENST00000628347 MYT1LQ9UL68 1186 aa20.12■□□□□ 0.81
SOX2-OT-247ENST00000628347 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
SOX2-OT-247ENST00000628347 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
SOX2-OT-247ENST00000628347 PLEKHH2Q8IVE3 1493 aa20.09■□□□□ 0.81
SOX2-OT-247ENST00000628347 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
SOX2-OT-247ENST00000628347 SYCP2Q9BX26 1530 aa20.08■□□□□ 0.81
SOX2-OT-247ENST00000628347 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
SOX2-OT-247ENST00000628347 CCNB3Q8WWL7 1395 aa20.08■□□□□ 0.8
SOX2-OT-247ENST00000628347 PREX1Q8TCU6 1659 aa20.07■□□□□ 0.8
SOX2-OT-247ENST00000628347 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
SOX2-OT-247ENST00000628347 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-247ENST00000628347 HSPA2P54652 639 aa20.05■□□□□ 0.8
SOX2-OT-247ENST00000628347 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
SOX2-OT-247ENST00000628347 SETD1BQ9UPS6 1966 aaKnown RBP20.04■□□□□ 0.8
SOX2-OT-247ENST00000628347 CEBPAP49715 358 aaPredicted RBP20.03■□□□□ 0.8
SOX2-OT-247ENST00000628347 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
SOX2-OT-247ENST00000628347 SPAG9O60271 1321 aaKnown RBP20.02■□□□□ 0.8
SOX2-OT-247ENST00000628347 HNRNPMP52272 730 aaKnown RBP eCLIP20.02■□□□□ 0.8
SOX2-OT-247ENST00000628347 ATP7AQ04656 1500 aa20.02■□□□□ 0.79
SOX2-OT-247ENST00000628347 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
SOX2-OT-247ENST00000628347 CNTLNQ9NXG0 1405 aa20.01■□□□□ 0.79
SOX2-OT-247ENST00000628347 C3P01024 1663 aa20■□□□□ 0.79
SOX2-OT-247ENST00000628347 FBXO41Q8TF61 875 aa20■□□□□ 0.79
SOX2-OT-247ENST00000628347 UHRF1BP1Q6BDS2 1440 aa19.98■□□□□ 0.79
SOX2-OT-247ENST00000628347 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
SOX2-OT-247ENST00000628347 ESF1Q9H501 851 aaKnown RBP19.96■□□□□ 0.79
SOX2-OT-247ENST00000628347 MROH2AA6NES4 1674 aa19.95■□□□□ 0.78
SOX2-OT-247ENST00000628347 A2MP01023 1474 aa19.95■□□□□ 0.78
SOX2-OT-247ENST00000628347 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
SOX2-OT-247ENST00000628347 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
SOX2-OT-247ENST00000628347 ADGBQ8N7X0 1667 aa19.92■□□□□ 0.78
SOX2-OT-247ENST00000628347 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
SOX2-OT-247ENST00000628347 RTEL1-TNFRSF6BF6WH68 1400 aa19.92■□□□□ 0.78
SOX2-OT-247ENST00000628347 NCOA2Q15596 1464 aa19.92■□□□□ 0.78
SOX2-OT-247ENST00000628347 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
SOX2-OT-247ENST00000628347 NPATQ14207 1427 aa19.9■□□□□ 0.78
SOX2-OT-247ENST00000628347 VPS8Q8N3P4 1428 aa19.9■□□□□ 0.78
SOX2-OT-247ENST00000628347 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
SOX2-OT-247ENST00000628347 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
SOX2-OT-247ENST00000628347 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
SOX2-OT-247ENST00000628347 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
SOX2-OT-247ENST00000628347 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
SOX2-OT-247ENST00000628347 CCDC141Q6ZP82 1450 aa19.86■□□□□ 0.77
SOX2-OT-247ENST00000628347 CLTCQ00610 1675 aaKnown RBP19.85■□□□□ 0.77
SOX2-OT-247ENST00000628347 RSPH4AQ5TD94 716 aa19.85■□□□□ 0.77
SOX2-OT-247ENST00000628347 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
SOX2-OT-247ENST00000628347 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SOX2-OT-247ENST00000628347 PTPRTO14522 1441 aa19.84■□□□□ 0.77
SOX2-OT-247ENST00000628347 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
SOX2-OT-247ENST00000628347 CERKQ8TCT0 537 aa19.83■□□□□ 0.77
SOX2-OT-247ENST00000628347 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.76
SOX2-OT-247ENST00000628347 GGT6Q6P531 493 aa19.81■□□□□ 0.76
SOX2-OT-247ENST00000628347 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
SOX2-OT-247ENST00000628347 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
SOX2-OT-247ENST00000628347 FAM135AQ9P2D6 1515 aa19.79■□□□□ 0.76
SOX2-OT-247ENST00000628347 ZNF142P52746 1687 aaPredicted RBP19.78■□□□□ 0.76
SOX2-OT-247ENST00000628347 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
SOX2-OT-247ENST00000628347 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
SOX2-OT-247ENST00000628347 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
SOX2-OT-247ENST00000628347 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
SOX2-OT-247ENST00000628347 MIA2Q96PC5 1412 aa19.73■□□□□ 0.75
SOX2-OT-247ENST00000628347 CEP170BQ9Y4F5 1589 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms