RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 CDK11AQ9UQ88 783 aaPredicted RBP12.6□□□□□ -0.39
CCDC163-204ENST00000628293 PLCH2O75038 1416 aa12.6□□□□□ -0.39
CCDC163-204ENST00000628293 FANCAO15360 1455 aa12.59□□□□□ -0.39
CCDC163-204ENST00000628293 MAP3K1Q13233 1512 aa12.57□□□□□ -0.4
CCDC163-204ENST00000628293 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
CCDC163-204ENST00000628293 AKNAQ7Z591 1439 aa12.56□□□□□ -0.4
CCDC163-204ENST00000628293 SUPT6HQ7KZ85 1726 aaKnown RBP12.56□□□□□ -0.4
CCDC163-204ENST00000628293 ARHGAP5Q13017 1502 aa12.55□□□□□ -0.4
CCDC163-204ENST00000628293 MTUS2Q5JR59 1369 aa12.55□□□□□ -0.4
CCDC163-204ENST00000628293 ITSN2Q9NZM3 1697 aa12.54□□□□□ -0.4
CCDC163-204ENST00000628293 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
CCDC163-204ENST00000628293 ABCC1P33527 1531 aa12.54□□□□□ -0.4
CCDC163-204ENST00000628293 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
CCDC163-204ENST00000628293 SAMD9LQ8IVG5 1584 aa12.54□□□□□ -0.4
CCDC163-204ENST00000628293 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
CCDC163-204ENST00000628293 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
CCDC163-204ENST00000628293 DENND4BO75064 1496 aaPredicted RBP12.52□□□□□ -0.41
CCDC163-204ENST00000628293 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
CCDC163-204ENST00000628293 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
CCDC163-204ENST00000628293 ARHGEF12Q9NZN5 1544 aa12.51□□□□□ -0.41
CCDC163-204ENST00000628293 POGZQ7Z3K3 1410 aa12.5□□□□□ -0.41
CCDC163-204ENST00000628293 KDM5CP41229 1560 aa12.5□□□□□ -0.41
CCDC163-204ENST00000628293 SIGLEC1Q9BZZ2 1709 aa12.49□□□□□ -0.41
CCDC163-204ENST00000628293 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
CCDC163-204ENST00000628293 RAPGEF3O95398 923 aa12.49□□□□□ -0.41
CCDC163-204ENST00000628293 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
CCDC163-204ENST00000628293 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
CCDC163-204ENST00000628293 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
CCDC163-204ENST00000628293 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
CCDC163-204ENST00000628293 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
CCDC163-204ENST00000628293 HECW2Q9P2P5 1572 aa12.46□□□□□ -0.42
CCDC163-204ENST00000628293 ZFYVE16Q7Z3T8 1539 aa12.45□□□□□ -0.42
CCDC163-204ENST00000628293 KIDINS220Q9ULH0 1771 aa12.45□□□□□ -0.42
CCDC163-204ENST00000628293 ZNF518AQ6AHZ1 1483 aa12.45□□□□□ -0.42
CCDC163-204ENST00000628293 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
CCDC163-204ENST00000628293 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
CCDC163-204ENST00000628293 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
CCDC163-204ENST00000628293 MAGI2Q86UL8 1455 aa12.43□□□□□ -0.42
CCDC163-204ENST00000628293 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
CCDC163-204ENST00000628293 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
CCDC163-204ENST00000628293 KIAA1107Q9UPP5 1409 aa12.42□□□□□ -0.42
CCDC163-204ENST00000628293 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
CCDC163-204ENST00000628293 PLEKHH2Q8IVE3 1493 aa12.41□□□□□ -0.42
CCDC163-204ENST00000628293 MBD5Q9P267 1494 aa12.41□□□□□ -0.42
CCDC163-204ENST00000628293 MLH3Q9UHC1 1453 aa12.4□□□□□ -0.42
CCDC163-204ENST00000628293 BCORL1Q5H9F3 1711 aa12.4□□□□□ -0.42
CCDC163-204ENST00000628293 MYOM3Q5VTT5 1437 aa12.4□□□□□ -0.42
CCDC163-204ENST00000628293 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
CCDC163-204ENST00000628293 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
CCDC163-204ENST00000628293 ZNF644Q9H582 1327 aaPredicted RBP12.39□□□□□ -0.43
CCDC163-204ENST00000628293 ADAMTSL3P82987 1691 aa12.39□□□□□ -0.43
CCDC163-204ENST00000628293 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
CCDC163-204ENST00000628293 ARHGEF5Q12774 1597 aa12.39□□□□□ -0.43
CCDC163-204ENST00000628293 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
CCDC163-204ENST00000628293 ZNF777Q9ULD5 760 aaPredicted RBP12.38□□□□□ -0.43
CCDC163-204ENST00000628293 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
CCDC163-204ENST00000628293 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
CCDC163-204ENST00000628293 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
CCDC163-204ENST00000628293 ADGBQ8N7X0 1667 aa12.37□□□□□ -0.43
CCDC163-204ENST00000628293 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
CCDC163-204ENST00000628293 CROCC2H7BZ55 1655 aa12.36□□□□□ -0.43
CCDC163-204ENST00000628293 ATP10AO60312 1499 aa12.36□□□□□ -0.43
CCDC163-204ENST00000628293 APLP2Q06481 763 aa12.36□□□□□ -0.43
CCDC163-204ENST00000628293 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
CCDC163-204ENST00000628293 HNRNPMP52272 730 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC163-204ENST00000628293 MADDQ8WXG6 1647 aa12.35□□□□□ -0.43
CCDC163-204ENST00000628293 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
CCDC163-204ENST00000628293 CCDC141Q6ZP82 1450 aa12.34□□□□□ -0.43
CCDC163-204ENST00000628293 FGD6Q6ZV73 1430 aa12.34□□□□□ -0.43
CCDC163-204ENST00000628293 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
CCDC163-204ENST00000628293 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
CCDC163-204ENST00000628293 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
CCDC163-204ENST00000628293 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
CCDC163-204ENST00000628293 AGLP35573 1532 aa12.32□□□□□ -0.44
CCDC163-204ENST00000628293 RIMS1Q86UR5 1692 aaKnown RBP12.31□□□□□ -0.44
CCDC163-204ENST00000628293 RTEL1-TNFRSF6BF6WH68 1400 aa12.3□□□□□ -0.44
CCDC163-204ENST00000628293 SPAG9O60271 1321 aaKnown RBP12.3□□□□□ -0.44
CCDC163-204ENST00000628293 PPP6R1Q9UPN7 881 aa12.29□□□□□ -0.44
CCDC163-204ENST00000628293 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.44
CCDC163-204ENST00000628293 ABCC5O15440 1437 aa12.27□□□□□ -0.45
CCDC163-204ENST00000628293 A2MP01023 1474 aa12.27□□□□□ -0.45
CCDC163-204ENST00000628293 DAPK1P53355 1430 aa12.26□□□□□ -0.45
CCDC163-204ENST00000628293 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
CCDC163-204ENST00000628293 PTPRMP28827 1452 aa12.25□□□□□ -0.45
CCDC163-204ENST00000628293 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
CCDC163-204ENST00000628293 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
CCDC163-204ENST00000628293 MYT1LQ9UL68 1186 aa12.23□□□□□ -0.45
CCDC163-204ENST00000628293 C3P01024 1663 aa12.22□□□□□ -0.45
CCDC163-204ENST00000628293 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
CCDC163-204ENST00000628293 MROH2AA6NES4 1674 aa12.22□□□□□ -0.45
CCDC163-204ENST00000628293 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
CCDC163-204ENST00000628293 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
CCDC163-204ENST00000628293 MROH1Q8NDA8 1641 aa12.21□□□□□ -0.46
CCDC163-204ENST00000628293 ADGRL2O95490 1459 aa12.21□□□□□ -0.46
CCDC163-204ENST00000628293 DHX29Q7Z478 1369 aaKnown RBP12.2□□□□□ -0.46
CCDC163-204ENST00000628293 MLECQ14165 292 aa12.2□□□□□ -0.46
CCDC163-204ENST00000628293 PTPRKQ15262 1439 aa12.2□□□□□ -0.46
CCDC163-204ENST00000628293 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
CCDC163-204ENST00000628293 DUOX2Q9NRD8 1548 aa12.19□□□□□ -0.46
CCDC163-204ENST00000628293 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms