RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 SRPK2P78362 688 aaKnown RBP8.75□□□□□ -1.01
CHD2-208ENST00000626874 EIF3AQ14152 1382 aaKnown RBP8.75□□□□□ -1.01
CHD2-208ENST00000626874 CCDC9Q9Y3X0 531 aaKnown RBP8.75□□□□□ -1.01
CHD2-208ENST00000626874 RRP7BPQ9NSQ0 103 aa8.75□□□□□ -1.01
CHD2-208ENST00000626874 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
CHD2-208ENST00000626874 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
CHD2-208ENST00000626874 GORABQ5T7V8 394 aa8.74□□□□□ -1.01
CHD2-208ENST00000626874 KIF3AQ9Y496 699 aa8.74□□□□□ -1.01
CHD2-208ENST00000626874 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
CHD2-208ENST00000626874 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
CHD2-208ENST00000626874 LRRFIP1Q32MZ4 808 aaKnown RBP8.73□□□□□ -1.01
CHD2-208ENST00000626874 HMGB2P26583 209 aaKnown RBP8.72□□□□□ -1.01
CHD2-208ENST00000626874 DCAF1Q9Y4B6 1507 aa8.72□□□□□ -1.01
CHD2-208ENST00000626874 AMOTL1Q8IY63 956 aa8.71□□□□□ -1.01
CHD2-208ENST00000626874 SYAP1Q96A49 352 aaPredicted RBP8.71□□□□□ -1.01
CHD2-208ENST00000626874 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
CHD2-208ENST00000626874 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
CHD2-208ENST00000626874 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
CHD2-208ENST00000626874 WRNQ14191 1432 aaPredicted RBP eCLIP8.7□□□□□ -1.02
CHD2-208ENST00000626874 LMOD3Q0VAK6 560 aa8.7□□□□□ -1.02
CHD2-208ENST00000626874 TCEAL9Q9UHQ7 104 aa8.7□□□□□ -1.02
CHD2-208ENST00000626874 PAK3O75914 559 aaPredicted RBP8.7□□□□□ -1.02
CHD2-208ENST00000626874 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
CHD2-208ENST00000626874 STK31Q9BXU1 1019 aa8.69□□□□□ -1.02
CHD2-208ENST00000626874 NBR1Q14596 966 aa8.69□□□□□ -1.02
CHD2-208ENST00000626874 MORC1Q86VD1 984 aa8.69□□□□□ -1.02
CHD2-208ENST00000626874 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
CHD2-208ENST00000626874 NOL10Q9BSC4 688 aaKnown RBP8.69□□□□□ -1.02
CHD2-208ENST00000626874 CTDP1Q9Y5B0 961 aaPredicted RBP8.69□□□□□ -1.02
CHD2-208ENST00000626874 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
CHD2-208ENST00000626874 HMMRO75330 724 aa8.68□□□□□ -1.02
CHD2-208ENST00000626874 MLECQ14165 292 aa8.68□□□□□ -1.02
CHD2-208ENST00000626874 TAOK2Q9UL54 1235 aa8.68□□□□□ -1.02
CHD2-208ENST00000626874 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
CHD2-208ENST00000626874 TERF2IPQ9NYB0 399 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 SENP3Q9H4L4 574 aaPredicted RBP8.67□□□□□ -1.02
CHD2-208ENST00000626874 FRAT2O75474 233 aaPredicted RBP8.67□□□□□ -1.02
CHD2-208ENST00000626874 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
CHD2-208ENST00000626874 EIF4G1Q04637 1599 aaKnown RBP8.67□□□□□ -1.02
CHD2-208ENST00000626874 RASSF8Q8NHQ8 419 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 MARCH6O60337 910 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 CNKSR2Q8WXI2 1034 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
CHD2-208ENST00000626874 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
CHD2-208ENST00000626874 MSNP26038 577 aaKnown RBP8.66□□□□□ -1.02
CHD2-208ENST00000626874 TPM2P07951 284 aa8.66□□□□□ -1.02
CHD2-208ENST00000626874 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
CHD2-208ENST00000626874 MEX3CQ5U5Q3 659 aaKnown RBP8.65□□□□□ -1.02
CHD2-208ENST00000626874 EFCAB2Q5VUJ9 269 aa8.65□□□□□ -1.02
CHD2-208ENST00000626874 SMC4Q9NTJ3 1288 aa8.65□□□□□ -1.03
CHD2-208ENST00000626874 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
CHD2-208ENST00000626874 ZNF330Q9Y3S2 320 aaPredicted RBP8.64□□□□□ -1.03
CHD2-208ENST00000626874 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
CHD2-208ENST00000626874 GBP4Q96PP9 640 aa8.64□□□□□ -1.03
CHD2-208ENST00000626874 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 TPM3P06753 285 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 PHF14O94880 888 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 EVA1CP58658 441 aa8.63□□□□□ -1.03
CHD2-208ENST00000626874 BAZ1AQ9NRL2 1556 aaPredicted RBP8.62□□□□□ -1.03
CHD2-208ENST00000626874 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
CHD2-208ENST00000626874 AKAP17AQ02040 695 aaKnown RBP8.62□□□□□ -1.03
CHD2-208ENST00000626874 NGDNQ8NEJ9 315 aaKnown RBP8.62□□□□□ -1.03
CHD2-208ENST00000626874 KTN1Q86UP2 1357 aaKnown RBP8.62□□□□□ -1.03
CHD2-208ENST00000626874 GGT6Q6P531 493 aa8.61□□□□□ -1.03
CHD2-208ENST00000626874 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
CHD2-208ENST00000626874 SOX12O15370 315 aa8.61□□□□□ -1.03
CHD2-208ENST00000626874 CCDC70Q6NSX1 233 aa8.6□□□□□ -1.03
CHD2-208ENST00000626874 CCDC47Q96A33 483 aaKnown RBP8.6□□□□□ -1.03
CHD2-208ENST00000626874 TPM1P09493 284 aa8.6□□□□□ -1.03
CHD2-208ENST00000626874 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
CHD2-208ENST00000626874 RWDD1Q9H446 243 aaPredicted RBP8.6□□□□□ -1.03
CHD2-208ENST00000626874 AMPHP49418 695 aa8.59□□□□□ -1.03
CHD2-208ENST00000626874 CPLX2Q6PUV4 134 aaKnown RBP8.59□□□□□ -1.03
CHD2-208ENST00000626874 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
CHD2-208ENST00000626874 C1orf141Q5JVX7 400 aa8.59□□□□□ -1.03
CHD2-208ENST00000626874 SMARCA2P51531 1590 aa8.59□□□□□ -1.03
CHD2-208ENST00000626874 ARHGAP35Q9NRY4 1499 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 PHLDB1Q86UU1 1377 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
CHD2-208ENST00000626874 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 ANKRD30AQ9BXX3 1397 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 WWC2Q6AWC2 1192 aa8.58□□□□□ -1.04
CHD2-208ENST00000626874 CCDC43Q96MW1 224 aaKnown RBP8.58□□□□□ -1.04
CHD2-208ENST00000626874 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 RDXP35241 583 aaKnown RBP8.57□□□□□ -1.04
CHD2-208ENST00000626874 MSH5O43196 834 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 R3HCC1Q9Y3T6 440 aaKnown RBP8.57□□□□□ -1.04
CHD2-208ENST00000626874 RGS3P49796 1198 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 NAP1L5Q96NT1 182 aaPredicted RBP8.57□□□□□ -1.04
CHD2-208ENST00000626874 KIF16BQ96L93 1317 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 HOOK1Q9UJC3 728 aaKnown RBP8.57□□□□□ -1.04
CHD2-208ENST00000626874 STK26Q9P289 416 aa8.57□□□□□ -1.04
CHD2-208ENST00000626874 RALBP1Q15311 655 aa8.56□□□□□ -1.04
CHD2-208ENST00000626874 TPD52L1Q16890 204 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms