RNA–Protein interactions for RNA: ENST00000625925.2

TCF4-251, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-251ENST00000625925 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
TCF4-251ENST00000625925 KDM5CP41229 1560 aa13.27□□□□□ -0.29
TCF4-251ENST00000625925 BCORL1Q5H9F3 1711 aa13.25□□□□□ -0.29
TCF4-251ENST00000625925 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
TCF4-251ENST00000625925 POGZQ7Z3K3 1410 aa13.25□□□□□ -0.29
TCF4-251ENST00000625925 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
TCF4-251ENST00000625925 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
TCF4-251ENST00000625925 ZNF518AQ6AHZ1 1483 aa13.24□□□□□ -0.29
TCF4-251ENST00000625925 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
TCF4-251ENST00000625925 ABCC1P33527 1531 aa13.23□□□□□ -0.29
TCF4-251ENST00000625925 ZFYVE16Q7Z3T8 1539 aa13.23□□□□□ -0.29
TCF4-251ENST00000625925 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
TCF4-251ENST00000625925 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
TCF4-251ENST00000625925 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
TCF4-251ENST00000625925 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
TCF4-251ENST00000625925 SUPT6HQ7KZ85 1726 aaKnown RBP13.21□□□□□ -0.3
TCF4-251ENST00000625925 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
TCF4-251ENST00000625925 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
TCF4-251ENST00000625925 ATP1B4Q9UN42 357 aaPredicted RBP13.19□□□□□ -0.3
TCF4-251ENST00000625925 VPS8Q8N3P4 1428 aa13.19□□□□□ -0.3
TCF4-251ENST00000625925 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
TCF4-251ENST00000625925 PLEKHH2Q8IVE3 1493 aa13.18□□□□□ -0.3
TCF4-251ENST00000625925 SAMD9LQ8IVG5 1584 aa13.17□□□□□ -0.3
TCF4-251ENST00000625925 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
TCF4-251ENST00000625925 RAPGEF3O95398 923 aa13.16□□□□□ -0.3
TCF4-251ENST00000625925 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
TCF4-251ENST00000625925 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
TCF4-251ENST00000625925 SIGLEC1Q9BZZ2 1709 aa13.16□□□□□ -0.3
TCF4-251ENST00000625925 KIDINS220Q9ULH0 1771 aa13.15□□□□□ -0.3
TCF4-251ENST00000625925 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
TCF4-251ENST00000625925 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
TCF4-251ENST00000625925 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
TCF4-251ENST00000625925 ABCA6Q8N139 1617 aa13.14□□□□□ -0.31
TCF4-251ENST00000625925 MADDQ8WXG6 1647 aa13.14□□□□□ -0.31
TCF4-251ENST00000625925 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
TCF4-251ENST00000625925 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
TCF4-251ENST00000625925 ATP10AO60312 1499 aa13.13□□□□□ -0.31
TCF4-251ENST00000625925 AGLP35573 1532 aa13.12□□□□□ -0.31
TCF4-251ENST00000625925 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
TCF4-251ENST00000625925 ADGBQ8N7X0 1667 aa13.12□□□□□ -0.31
TCF4-251ENST00000625925 YEATS2Q9ULM3 1422 aa13.11□□□□□ -0.31
TCF4-251ENST00000625925 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
TCF4-251ENST00000625925 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
TCF4-251ENST00000625925 ARHGEF12Q9NZN5 1544 aa13.1□□□□□ -0.31
TCF4-251ENST00000625925 FOXD1Q16676 465 aa13.1□□□□□ -0.31
TCF4-251ENST00000625925 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
TCF4-251ENST00000625925 PTPRMP28827 1452 aa13.09□□□□□ -0.31
TCF4-251ENST00000625925 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
TCF4-251ENST00000625925 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
TCF4-251ENST00000625925 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
TCF4-251ENST00000625925 PLXNC1O60486 1568 aa13.07□□□□□ -0.32
TCF4-251ENST00000625925 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
TCF4-251ENST00000625925 MROH2AA6NES4 1674 aa13.07□□□□□ -0.32
TCF4-251ENST00000625925 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
TCF4-251ENST00000625925 FAM135AQ9P2D6 1515 aa13.03□□□□□ -0.32
TCF4-251ENST00000625925 PREX1Q8TCU6 1659 aa13.03□□□□□ -0.32
TCF4-251ENST00000625925 CFDP1Q9UEE9 299 aaPredicted RBP13.03□□□□□ -0.32
TCF4-251ENST00000625925 RTEL1-TNFRSF6BF6WH68 1400 aa13.03□□□□□ -0.32
TCF4-251ENST00000625925 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
TCF4-251ENST00000625925 CAMSAP2Q08AD1 1489 aa13.02□□□□□ -0.33
TCF4-251ENST00000625925 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.33
TCF4-251ENST00000625925 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
TCF4-251ENST00000625925 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
TCF4-251ENST00000625925 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
TCF4-251ENST00000625925 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
TCF4-251ENST00000625925 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
TCF4-251ENST00000625925 ARID4BQ4LE39 1312 aaPredicted RBP13□□□□□ -0.33
TCF4-251ENST00000625925 C3P01024 1663 aa12.99□□□□□ -0.33
TCF4-251ENST00000625925 RSPH4AQ5TD94 716 aa12.99□□□□□ -0.33
TCF4-251ENST00000625925 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
TCF4-251ENST00000625925 CNTLNQ9NXG0 1405 aa12.98□□□□□ -0.33
TCF4-251ENST00000625925 SPAG9O60271 1321 aaKnown RBP12.97□□□□□ -0.33
TCF4-251ENST00000625925 EIF2AK4Q9P2K8 1649 aaKnown RBP12.97□□□□□ -0.33
TCF4-251ENST00000625925 A2MP01023 1474 aa12.96□□□□□ -0.34
TCF4-251ENST00000625925 LMTK3Q96Q04 1460 aa12.96□□□□□ -0.34
TCF4-251ENST00000625925 ZC3H13Q5T200 1668 aaKnown RBP12.94□□□□□ -0.34
TCF4-251ENST00000625925 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
TCF4-251ENST00000625925 ZNF777Q9ULD5 760 aaPredicted RBP12.94□□□□□ -0.34
TCF4-251ENST00000625925 RNF17Q9BXT8 1623 aaKnown RBP12.93□□□□□ -0.34
TCF4-251ENST00000625925 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
TCF4-251ENST00000625925 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
TCF4-251ENST00000625925 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
TCF4-251ENST00000625925 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
TCF4-251ENST00000625925 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.347e-6■■■□□ 17
TCF4-251ENST00000625925 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
TCF4-251ENST00000625925 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
TCF4-251ENST00000625925 NPATQ14207 1427 aa12.9□□□□□ -0.34
TCF4-251ENST00000625925 APLP2Q06481 763 aa12.9□□□□□ -0.34
TCF4-251ENST00000625925 MYT1LQ9UL68 1186 aa12.9□□□□□ -0.34
TCF4-251ENST00000625925 DHX29Q7Z478 1369 aaKnown RBP12.89□□□□□ -0.35
TCF4-251ENST00000625925 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
TCF4-251ENST00000625925 KDM5DQ9BY66 1539 aa12.88□□□□□ -0.35
TCF4-251ENST00000625925 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
TCF4-251ENST00000625925 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
TCF4-251ENST00000625925 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
TCF4-251ENST00000625925 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
TCF4-251ENST00000625925 MYO3AQ8NEV4 1616 aa12.85□□□□□ -0.35
TCF4-251ENST00000625925 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
TCF4-251ENST00000625925 STRCQ7RTU9 1775 aa12.84□□□□□ -0.35
TCF4-251ENST00000625925 PRDM15P57071 1507 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms