RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 TROQ12816 1431 aaPredicted RBP31.35■■■□□ 2.61
ATG4B-226ENST00000625810 SCAPERQ9BY12 1400 aa31.35■■■□□ 2.61
ATG4B-226ENST00000625810 MAGI2Q86UL8 1455 aa31.34■■■□□ 2.61
ATG4B-226ENST00000625810 SIGLEC1Q9BZZ2 1709 aa31.32■■■□□ 2.61
ATG4B-226ENST00000625810 ILDR1Q86SU0 546 aaPredicted RBP31.29■■■□□ 2.6
ATG4B-226ENST00000625810 PCF11O94913 1555 aaKnown RBP31.29■■■□□ 2.6
ATG4B-226ENST00000625810 CLIP1P30622 1438 aa31.28■■■□□ 2.6
ATG4B-226ENST00000625810 EFCAB2Q5VUJ9 269 aa31.28■■■□□ 2.6
ATG4B-226ENST00000625810 RIMS1Q86UR5 1692 aaKnown RBP31.28■■■□□ 2.6
ATG4B-226ENST00000625810 CASKIN1Q8WXD9 1431 aa31.26■■■□□ 2.6
ATG4B-226ENST00000625810 ARHGAP5Q13017 1502 aa31.23■■■□□ 2.59
ATG4B-226ENST00000625810 CCDC18Q5T9S5 1454 aa31.21■■■□□ 2.59
ATG4B-226ENST00000625810 ATP10AO60312 1499 aa31.17■■■□□ 2.58
ATG4B-226ENST00000625810 ZNF518AQ6AHZ1 1483 aa31.17■■■□□ 2.58
ATG4B-226ENST00000625810 LMTK3Q96Q04 1460 aa31.17■■■□□ 2.58
ATG4B-226ENST00000625810 KDM5CP41229 1560 aa31.15■■■□□ 2.58
ATG4B-226ENST00000625810 CDC42BPBQ9Y5S2 1711 aa31.15■■■□□ 2.58
ATG4B-226ENST00000625810 C9orf84Q5VXU9 1444 aa31.15■■■□□ 2.58
ATG4B-226ENST00000625810 FYCO1Q9BQS8 1478 aa31.14■■■□□ 2.58
ATG4B-226ENST00000625810 PREX2Q70Z35 1606 aa31.13■■■□□ 2.57
ATG4B-226ENST00000625810 MLECQ14165 292 aa31.12■■■□□ 2.57
ATG4B-226ENST00000625810 FER1L4A9Z1Z3 1794 aa31.1■■■□□ 2.57
ATG4B-226ENST00000625810 AFAP1Q8N556 730 aa31.1■■■□□ 2.57
ATG4B-226ENST00000625810 ARHGEF12Q9NZN5 1544 aa31.08■■■□□ 2.57
ATG4B-226ENST00000625810 ABCC1P33527 1531 aa31.07■■■□□ 2.56
ATG4B-226ENST00000625810 PLPPR3Q6T4P5 718 aa31.05■■■□□ 2.56
ATG4B-226ENST00000625810 DIP2CQ9Y2E4 1556 aa31.04■■■□□ 2.56
ATG4B-226ENST00000625810 CDC42BPAQ5VT25 1732 aa31.02■■■□□ 2.56
ATG4B-226ENST00000625810 TRAPPC8Q9Y2L5 1435 aa31.01■■■□□ 2.55
ATG4B-226ENST00000625810 ITSN2Q9NZM3 1697 aa31.01■■■□□ 2.55
ATG4B-226ENST00000625810 MLH3Q9UHC1 1453 aa31.01■■■□□ 2.55
ATG4B-226ENST00000625810 ABCA6Q8N139 1617 aa30.99■■■□□ 2.55
ATG4B-226ENST00000625810 MYT1LQ9UL68 1186 aa30.99■■■□□ 2.55
ATG4B-226ENST00000625810 REREQ9P2R6 1566 aa30.99■■■□□ 2.55
ATG4B-226ENST00000625810 HSPA2P54652 639 aa30.95■■■□□ 2.55
ATG4B-226ENST00000625810 GPATCH8Q9UKJ3 1502 aaKnown RBP30.92■■■□□ 2.54
ATG4B-226ENST00000625810 SAMD9LQ8IVG5 1584 aa30.91■■■□□ 2.54
ATG4B-226ENST00000625810 KIDINS220Q9ULH0 1771 aa30.89■■■□□ 2.54
ATG4B-226ENST00000625810 AGLP35573 1532 aa30.88■■■□□ 2.53
ATG4B-226ENST00000625810 CEBPAP49715 358 aaPredicted RBP30.86■■■□□ 2.53
ATG4B-226ENST00000625810 SYCP2Q9BX26 1530 aa30.86■■■□□ 2.53
ATG4B-226ENST00000625810 PREX1Q8TCU6 1659 aa30.85■■■□□ 2.53
ATG4B-226ENST00000625810 ZNF777Q9ULD5 760 aaPredicted RBP30.84■■■□□ 2.53
ATG4B-226ENST00000625810 FBXO41Q8TF61 875 aa30.83■■■□□ 2.53
ATG4B-226ENST00000625810 MTUS2Q5JR59 1369 aa30.79■■■□□ 2.52
ATG4B-226ENST00000625810 CCNB3Q8WWL7 1395 aa30.78■■■□□ 2.52
ATG4B-226ENST00000625810 CEP162Q5TB80 1403 aa30.77■■■□□ 2.52
ATG4B-226ENST00000625810 KIAA1107Q9UPP5 1409 aa30.77■■■□□ 2.52
ATG4B-226ENST00000625810 HNRNPMP52272 730 aaKnown RBP eCLIP30.76■■■□□ 2.51
ATG4B-226ENST00000625810 CFDP1Q9UEE9 299 aaPredicted RBP30.76■■■□□ 2.51
ATG4B-226ENST00000625810 PLEKHH2Q8IVE3 1493 aa30.76■■■□□ 2.51
ATG4B-226ENST00000625810 C3P01024 1663 aa30.75■■■□□ 2.51
ATG4B-226ENST00000625810 SPAG9O60271 1321 aaKnown RBP30.74■■■□□ 2.51
ATG4B-226ENST00000625810 EHBP1L1Q8N3D4 1523 aa30.73■■■□□ 2.51
ATG4B-226ENST00000625810 TIAM1Q13009 1591 aa30.72■■■□□ 2.51
ATG4B-226ENST00000625810 ATP7AQ04656 1500 aa30.72■■■□□ 2.51
ATG4B-226ENST00000625810 UHRF1BP1Q6BDS2 1440 aa30.72■■■□□ 2.51
ATG4B-226ENST00000625810 INO80Q9ULG1 1556 aaPredicted RBP30.71■■■□□ 2.51
ATG4B-226ENST00000625810 CNTLNQ9NXG0 1405 aa30.68■■■□□ 2.5
ATG4B-226ENST00000625810 ESF1Q9H501 851 aaKnown RBP30.68■■■□□ 2.5
ATG4B-226ENST00000625810 SETD1BQ9UPS6 1966 aaKnown RBP30.66■■■□□ 2.5
ATG4B-226ENST00000625810 PLXNC1O60486 1568 aa30.66■■■□□ 2.5
ATG4B-226ENST00000625810 SUPT6HQ7KZ85 1726 aaKnown RBP30.64■■■□□ 2.5
ATG4B-226ENST00000625810 STRCQ7RTU9 1775 aa30.64■■■□□ 2.49
ATG4B-226ENST00000625810 ZNF644Q9H582 1327 aaPredicted RBP30.63■■■□□ 2.49
ATG4B-226ENST00000625810 LOC105371045A0A1W2PR82 267 aa30.62■■■□□ 2.49
ATG4B-226ENST00000625810 A2MP01023 1474 aa30.62■■■□□ 2.49
ATG4B-226ENST00000625810 MROH2AA6NES4 1674 aa30.61■■■□□ 2.49
ATG4B-226ENST00000625810 MBD5Q9P267 1494 aa30.6■■■□□ 2.49
ATG4B-226ENST00000625810 CERKQ8TCT0 537 aa30.55■■■□□ 2.48
ATG4B-226ENST00000625810 NCOA2Q15596 1464 aa30.54■■■□□ 2.48
ATG4B-226ENST00000625810 ADGBQ8N7X0 1667 aa30.54■■■□□ 2.48
ATG4B-226ENST00000625810 ZMYM3Q14202 1370 aa30.54■■■□□ 2.48
ATG4B-226ENST00000625810 NPATQ14207 1427 aa30.53■■■□□ 2.48
ATG4B-226ENST00000625810 CLTCQ00610 1675 aaKnown RBP30.52■■■□□ 2.48
ATG4B-226ENST00000625810 DMRT2Q9Y5R5 561 aa30.52■■■□□ 2.48
ATG4B-226ENST00000625810 RTEL1-TNFRSF6BF6WH68 1400 aa30.49■■■□□ 2.47
ATG4B-226ENST00000625810 CAMSAP2Q08AD1 1489 aa30.47■■■□□ 2.47
ATG4B-226ENST00000625810 PTPRTO14522 1441 aa30.46■■■□□ 2.47
ATG4B-226ENST00000625810 NCOA1Q15788 1441 aa30.46■■■□□ 2.47
ATG4B-226ENST00000625810 GGT6Q6P531 493 aa30.45■■■□□ 2.47
ATG4B-226ENST00000625810 VPS8Q8N3P4 1428 aa30.45■■■□□ 2.46
ATG4B-226ENST00000625810 CCDC141Q6ZP82 1450 aa30.44■■■□□ 2.46
ATG4B-226ENST00000625810 PTPRKQ15262 1439 aa30.41■■■□□ 2.46
ATG4B-226ENST00000625810 DHX29Q7Z478 1369 aaKnown RBP30.41■■■□□ 2.46
ATG4B-226ENST00000625810 CAMSAP1Q5T5Y3 1602 aa30.4■■■□□ 2.46
ATG4B-226ENST00000625810 MYO3AQ8NEV4 1616 aa30.4■■■□□ 2.46
ATG4B-226ENST00000625810 LRRC9Q6ZRR7 1453 aa30.39■■■□□ 2.46
ATG4B-226ENST00000625810 PPP6R1Q9UPN7 881 aa30.39■■■□□ 2.46
ATG4B-226ENST00000625810 ZNF142P52746 1687 aaPredicted RBP30.37■■■□□ 2.45
ATG4B-226ENST00000625810 ARHGEF5Q12774 1597 aa30.36■■■□□ 2.45
ATG4B-226ENST00000625810 RSPH4AQ5TD94 716 aa30.34■■■□□ 2.45
ATG4B-226ENST00000625810 CEP170BQ9Y4F5 1589 aaPredicted RBP30.33■■■□□ 2.45
ATG4B-226ENST00000625810 LTBP4Q8N2S1 1624 aa30.3■■■□□ 2.44
ATG4B-226ENST00000625810 MAP3K1Q13233 1512 aa30.3■■■□□ 2.44
ATG4B-226ENST00000625810 KIF3BO15066 747 aa30.28■■■□□ 2.44
ATG4B-226ENST00000625810 PLA2R1Q13018 1463 aa30.27■■■□□ 2.44
ATG4B-226ENST00000625810 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
ATG4B-226ENST00000625810 FAM135AQ9P2D6 1515 aa30.27■■■□□ 2.44
ATG4B-226ENST00000625810 TSPY4P0CV99 314 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms