RNA–Protein interactions for RNA: ENST00000625278.2

LINC02246-204, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 740 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-204ENST00000625278 NCKAP5LQ9HCH0 1330 aa17.19■□□□□ 0.34
LINC02246-204ENST00000625278 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
LINC02246-204ENST00000625278 LARP6Q9BRS8 491 aaKnown RBP17.15■□□□□ 0.34
LINC02246-204ENST00000625278 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
LINC02246-204ENST00000625278 PDE4AP27815 886 aa17.14■□□□□ 0.33
LINC02246-204ENST00000625278 MAMSTRQ6ZN01 415 aa17.14■□□□□ 0.33
LINC02246-204ENST00000625278 C2orf72A6NCS6 295 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
LINC02246-204ENST00000625278 OTUD5Q96G74 571 aa17.12■□□□□ 0.33
LINC02246-204ENST00000625278 GPHNQ9NQX3 736 aaPredicted RBP17.11■□□□□ 0.33
LINC02246-204ENST00000625278 SLAIN1Q8ND83 568 aa17.09■□□□□ 0.33
LINC02246-204ENST00000625278 KIF3CO14782 793 aa17.07■□□□□ 0.32
LINC02246-204ENST00000625278 WDR70Q9NW82 654 aa17.05■□□□□ 0.32
LINC02246-204ENST00000625278 DSG2Q14126 1118 aa17.04■□□□□ 0.32
LINC02246-204ENST00000625278 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
LINC02246-204ENST00000625278 MFSD10Q14728 455 aa17■□□□□ 0.31
LINC02246-204ENST00000625278 FOXK1P85037 733 aa16.99■□□□□ 0.31
LINC02246-204ENST00000625278 PPP1R15BQ5SWA1 713 aa16.99■□□□□ 0.31
LINC02246-204ENST00000625278 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
LINC02246-204ENST00000625278 E2F4Q16254 413 aa16.88■□□□□ 0.29
LINC02246-204ENST00000625278 CAMK2BQ13554 666 aa16.81■□□□□ 0.28
LINC02246-204ENST00000625278 HOXB3P14651 431 aaPredicted RBP16.8■□□□□ 0.28
LINC02246-204ENST00000625278 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
LINC02246-204ENST00000625278 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
LINC02246-204ENST00000625278 EMILIN3Q9NT22 766 aa16.8■□□□□ 0.28
LINC02246-204ENST00000625278 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
LINC02246-204ENST00000625278 SNPHO15079 494 aa16.74■□□□□ 0.27
LINC02246-204ENST00000625278 SLC34A2O95436 690 aa16.72■□□□□ 0.27
LINC02246-204ENST00000625278 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
LINC02246-204ENST00000625278 OXER1Q8TDS5 423 aa16.71■□□□□ 0.27
LINC02246-204ENST00000625278 DPYSL4O14531 572 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 MAP3K9P80192 1104 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
LINC02246-204ENST00000625278 PTCD2Q8WV60 388 aaKnown RBP16.7■□□□□ 0.26
LINC02246-204ENST00000625278 KHSRPQ92945 711 aaKnown RBP eCLIP16.68■□□□□ 0.26
LINC02246-204ENST00000625278 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
LINC02246-204ENST00000625278 ARSIQ5FYB1 569 aa16.67■□□□□ 0.26
LINC02246-204ENST00000625278 ARHGEF1Q92888 912 aaKnown RBP16.67■□□□□ 0.26
LINC02246-204ENST00000625278 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
LINC02246-204ENST00000625278 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
LINC02246-204ENST00000625278 TBC1D12O60347 775 aa16.65■□□□□ 0.26
LINC02246-204ENST00000625278 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
LINC02246-204ENST00000625278 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
LINC02246-204ENST00000625278 ST18O60284 1047 aa16.59■□□□□ 0.25
LINC02246-204ENST00000625278 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
LINC02246-204ENST00000625278 EVI5O60447 810 aa16.57■□□□□ 0.24
LINC02246-204ENST00000625278 NUDT7P0C024 238 aa16.57■□□□□ 0.24
LINC02246-204ENST00000625278 HOXB1P14653 301 aaPredicted RBP16.53■□□□□ 0.24
LINC02246-204ENST00000625278 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
LINC02246-204ENST00000625278 SEMA3EO15041 775 aa16.51■□□□□ 0.23
LINC02246-204ENST00000625278 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
LINC02246-204ENST00000625278 PDIA6Q15084 440 aa16.5■□□□□ 0.23
LINC02246-204ENST00000625278 NBR1Q14596 966 aa16.49■□□□□ 0.23
LINC02246-204ENST00000625278 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
LINC02246-204ENST00000625278 LCE2DQ5TA82 110 aaPredicted RBP16.48■□□□□ 0.23
LINC02246-204ENST00000625278 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
LINC02246-204ENST00000625278 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
LINC02246-204ENST00000625278 DDX12PQ92771 950 aa16.44■□□□□ 0.22
LINC02246-204ENST00000625278 LHX6Q9UPM6 363 aa16.44■□□□□ 0.22
LINC02246-204ENST00000625278 MLLT3P42568 568 aaPredicted RBP16.43■□□□□ 0.22
LINC02246-204ENST00000625278 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
LINC02246-204ENST00000625278 BCANQ96GW7 911 aa16.41■□□□□ 0.22
LINC02246-204ENST00000625278 EMP3P54852 163 aa16.39■□□□□ 0.21
LINC02246-204ENST00000625278 TESPA1A2RU30 521 aaPredicted RBP16.37■□□□□ 0.21
LINC02246-204ENST00000625278 PTGER2P43116 358 aa16.37■□□□□ 0.21
LINC02246-204ENST00000625278 ERBB3P21860 1342 aa16.37■□□□□ 0.21
LINC02246-204ENST00000625278 FAM205CA6NFA0 338 aa16.34■□□□□ 0.21
LINC02246-204ENST00000625278 ZNF454Q8N9F8 522 aa16.33■□□□□ 0.2
LINC02246-204ENST00000625278 PCDHGA10Q9Y5H3 936 aa16.32■□□□□ 0.2
LINC02246-204ENST00000625278 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
LINC02246-204ENST00000625278 FOSBP53539 338 aa16.3■□□□□ 0.2
LINC02246-204ENST00000625278 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 PHF14O94880 888 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
LINC02246-204ENST00000625278 OSBPP22059 807 aa16.27■□□□□ 0.2
LINC02246-204ENST00000625278 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
LINC02246-204ENST00000625278 SMYD5Q6GMV2 418 aa16.26■□□□□ 0.19
LINC02246-204ENST00000625278 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
LINC02246-204ENST00000625278 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 EPAS1Q99814 870 aa16.24■□□□□ 0.19
LINC02246-204ENST00000625278 PSDA5PKW4 1024 aaPredicted RBP16.23■□□□□ 0.19
LINC02246-204ENST00000625278 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
LINC02246-204ENST00000625278 ZDHHC16Q969W1 377 aa16.23■□□□□ 0.19
LINC02246-204ENST00000625278 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
LINC02246-204ENST00000625278 ADAM33Q9BZ11 813 aa16.21■□□□□ 0.19
LINC02246-204ENST00000625278 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
LINC02246-204ENST00000625278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
LINC02246-204ENST00000625278 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
LINC02246-204ENST00000625278 MAP3K7O43318 606 aa16.17■□□□□ 0.18
LINC02246-204ENST00000625278 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
LINC02246-204ENST00000625278 POTEMA6NI47 508 aa16.16■□□□□ 0.18
LINC02246-204ENST00000625278 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
LINC02246-204ENST00000625278 TSR1Q2NL82 804 aaKnown RBP16.14■□□□□ 0.17
LINC02246-204ENST00000625278 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
LINC02246-204ENST00000625278 ZNF687Q8N1G0 1237 aa16.14■□□□□ 0.17
LINC02246-204ENST00000625278 NUTM2FA1L443 756 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms