RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 POGZQ7Z3K3 1410 aa25.48■■□□□ 1.67
ATRX-217ENST00000624668 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
ATRX-217ENST00000624668 CDK11AQ9UQ88 783 aaPredicted RBP25.48■■□□□ 1.67
ATRX-217ENST00000624668 ZFYVE16Q7Z3T8 1539 aa25.47■■□□□ 1.67
ATRX-217ENST00000624668 CASKIN1Q8WXD9 1431 aa25.46■■□□□ 1.67
ATRX-217ENST00000624668 MAGI2Q86UL8 1455 aa25.43■■□□□ 1.66
ATRX-217ENST00000624668 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
ATRX-217ENST00000624668 CLIP1P30622 1438 aa25.41■■□□□ 1.66
ATRX-217ENST00000624668 ARHGAP5Q13017 1502 aa25.39■■□□□ 1.66
ATRX-217ENST00000624668 CCDC18Q5T9S5 1454 aa25.39■■□□□ 1.65
ATRX-217ENST00000624668 RIMS1Q86UR5 1692 aaKnown RBP25.38■■□□□ 1.65
ATRX-217ENST00000624668 CDC42BPBQ9Y5S2 1711 aa25.36■■□□□ 1.65
ATRX-217ENST00000624668 FYCO1Q9BQS8 1478 aa25.35■■□□□ 1.65
ATRX-217ENST00000624668 KDM5CP41229 1560 aa25.33■■□□□ 1.65
ATRX-217ENST00000624668 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
ATRX-217ENST00000624668 AFAP1Q8N556 730 aa25.32■■□□□ 1.64
ATRX-217ENST00000624668 ATP10AO60312 1499 aa25.32■■□□□ 1.64
ATRX-217ENST00000624668 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
ATRX-217ENST00000624668 ILDR1Q86SU0 546 aaPredicted RBP25.3■■□□□ 1.64
ATRX-217ENST00000624668 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
ATRX-217ENST00000624668 MLECQ14165 292 aa25.29■■□□□ 1.64
ATRX-217ENST00000624668 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
ATRX-217ENST00000624668 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
ATRX-217ENST00000624668 ABCC1P33527 1531 aa25.27■■□□□ 1.64
ATRX-217ENST00000624668 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
ATRX-217ENST00000624668 TRAPPC8Q9Y2L5 1435 aa25.25■■□□□ 1.63
ATRX-217ENST00000624668 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
ATRX-217ENST00000624668 DIP2CQ9Y2E4 1556 aa25.24■■□□□ 1.63
ATRX-217ENST00000624668 PLPPR3Q6T4P5 718 aa25.22■■□□□ 1.63
ATRX-217ENST00000624668 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
ATRX-217ENST00000624668 ABCA6Q8N139 1617 aa25.21■■□□□ 1.63
ATRX-217ENST00000624668 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
ATRX-217ENST00000624668 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
ATRX-217ENST00000624668 REREQ9P2R6 1566 aa25.17■■□□□ 1.62
ATRX-217ENST00000624668 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
ATRX-217ENST00000624668 HSPA2P54652 639 aa25.14■■□□□ 1.62
ATRX-217ENST00000624668 KIDINS220Q9ULH0 1771 aa25.13■■□□□ 1.61
ATRX-217ENST00000624668 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
ATRX-217ENST00000624668 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
ATRX-217ENST00000624668 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
ATRX-217ENST00000624668 SYCP2Q9BX26 1530 aa25.11■■□□□ 1.61
ATRX-217ENST00000624668 CEBPAP49715 358 aaPredicted RBP25.1■■□□□ 1.61
ATRX-217ENST00000624668 AGLP35573 1532 aa25.08■■□□□ 1.61
ATRX-217ENST00000624668 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
ATRX-217ENST00000624668 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.61e-7■■■■■ 32.5
ATRX-217ENST00000624668 CCNB3Q8WWL7 1395 aa25.05■■□□□ 1.6
ATRX-217ENST00000624668 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
ATRX-217ENST00000624668 CFDP1Q9UEE9 299 aaPredicted RBP25.03■■□□□ 1.6
ATRX-217ENST00000624668 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
ATRX-217ENST00000624668 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
ATRX-217ENST00000624668 PREX1Q8TCU6 1659 aa25.01■■□□□ 1.59
ATRX-217ENST00000624668 SPAG9O60271 1321 aaKnown RBP24.99■■□□□ 1.59
ATRX-217ENST00000624668 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
ATRX-217ENST00000624668 C3P01024 1663 aa24.98■■□□□ 1.59
ATRX-217ENST00000624668 ATP7AQ04656 1500 aa24.98■■□□□ 1.59
ATRX-217ENST00000624668 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
ATRX-217ENST00000624668 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
ATRX-217ENST00000624668 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
ATRX-217ENST00000624668 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
ATRX-217ENST00000624668 MBD5Q9P267 1494 aa24.93■■□□□ 1.58
ATRX-217ENST00000624668 SUPT6HQ7KZ85 1726 aaKnown RBP24.92■■□□□ 1.58
ATRX-217ENST00000624668 FBXO41Q8TF61 875 aa24.92■■□□□ 1.58
ATRX-217ENST00000624668 UHRF1BP1Q6BDS2 1440 aa24.91■■□□□ 1.58
ATRX-217ENST00000624668 A2MP01023 1474 aa24.89■■□□□ 1.58
ATRX-217ENST00000624668 NCOA2Q15596 1464 aa24.89■■□□□ 1.57
ATRX-217ENST00000624668 CNTLNQ9NXG0 1405 aa24.88■■□□□ 1.57
ATRX-217ENST00000624668 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
ATRX-217ENST00000624668 ESF1Q9H501 851 aaKnown RBP24.87■■□□□ 1.57
ATRX-217ENST00000624668 SETD1BQ9UPS6 1966 aaKnown RBP24.87■■□□□ 1.57
ATRX-217ENST00000624668 VPS8Q8N3P4 1428 aa24.85■■□□□ 1.57
ATRX-217ENST00000624668 MROH2AA6NES4 1674 aa24.85■■□□□ 1.57
ATRX-217ENST00000624668 ADGBQ8N7X0 1667 aa24.82■■□□□ 1.56
ATRX-217ENST00000624668 CAMSAP2Q08AD1 1489 aa24.81■■□□□ 1.56
ATRX-217ENST00000624668 CLTCQ00610 1675 aaKnown RBP24.81■■□□□ 1.56
ATRX-217ENST00000624668 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
ATRX-217ENST00000624668 RTEL1-TNFRSF6BF6WH68 1400 aa24.79■■□□□ 1.56
ATRX-217ENST00000624668 LRRC9Q6ZRR7 1453 aa24.78■■□□□ 1.56
ATRX-217ENST00000624668 NPATQ14207 1427 aa24.78■■□□□ 1.56
ATRX-217ENST00000624668 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
ATRX-217ENST00000624668 GGT6Q6P531 493 aa24.76■■□□□ 1.55
ATRX-217ENST00000624668 CERKQ8TCT0 537 aa24.75■■□□□ 1.55
ATRX-217ENST00000624668 DHX29Q7Z478 1369 aaKnown RBP24.74■■□□□ 1.55
ATRX-217ENST00000624668 PTPRKQ15262 1439 aa24.72■■□□□ 1.55
ATRX-217ENST00000624668 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
ATRX-217ENST00000624668 NCOA1Q15788 1441 aa24.71■■□□□ 1.55
ATRX-217ENST00000624668 ARHGEF5Q12774 1597 aa24.71■■□□□ 1.55
ATRX-217ENST00000624668 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
ATRX-217ENST00000624668 MAP3K1Q13233 1512 aa24.7■■□□□ 1.54
ATRX-217ENST00000624668 PTPRTO14522 1441 aa24.69■■□□□ 1.54
ATRX-217ENST00000624668 MYO3AQ8NEV4 1616 aa24.68■■□□□ 1.54
ATRX-217ENST00000624668 CAMSAP1Q5T5Y3 1602 aa24.67■■□□□ 1.54
ATRX-217ENST00000624668 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
ATRX-217ENST00000624668 PPP6R1Q9UPN7 881 aa24.66■■□□□ 1.54
ATRX-217ENST00000624668 ZNF142P52746 1687 aaPredicted RBP24.66■■□□□ 1.54
ATRX-217ENST00000624668 KIF3BO15066 747 aa24.64■■□□□ 1.54
ATRX-217ENST00000624668 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
ATRX-217ENST00000624668 MYOM3Q5VTT5 1437 aa24.61■■□□□ 1.53
ATRX-217ENST00000624668 LTBP4Q8N2S1 1624 aa24.59■■□□□ 1.53
ATRX-217ENST00000624668 KDM5DQ9BY66 1539 aa24.59■■□□□ 1.53
ATRX-217ENST00000624668 NCKAP5LQ9HCH0 1330 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms