RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
AC004943.3-201ENST00000624116 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
AC004943.3-201ENST00000624116 FAM205CA6NFA0 338 aa13.75□□□□□ -0.21
AC004943.3-201ENST00000624116 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
AC004943.3-201ENST00000624116 ERBB3P21860 1342 aa13.68□□□□□ -0.22
AC004943.3-201ENST00000624116 CHGAP10645 457 aaKnown RBP13.66□□□□□ -0.22
AC004943.3-201ENST00000624116 TMC2Q8TDI7 906 aa13.65□□□□□ -0.22
AC004943.3-201ENST00000624116 RYDENQ9NUL5 291 aaKnown RBP13.64□□□□□ -0.23
AC004943.3-201ENST00000624116 C2orf72A6NCS6 295 aa13.63□□□□□ -0.23
AC004943.3-201ENST00000624116 KIF3CO14782 793 aa13.63□□□□□ -0.23
AC004943.3-201ENST00000624116 GPR153Q6NV75 609 aa13.62□□□□□ -0.23
AC004943.3-201ENST00000624116 POTEB3A0JP26 581 aa13.61□□□□□ -0.23
AC004943.3-201ENST00000624116 POTEBQ6S5H4 581 aa13.61□□□□□ -0.23
AC004943.3-201ENST00000624116 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
AC004943.3-201ENST00000624116 SPNS2Q8IVW8 549 aa13.59□□□□□ -0.23
AC004943.3-201ENST00000624116 PPP1R37O75864 691 aa13.58□□□□□ -0.24
AC004943.3-201ENST00000624116 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
AC004943.3-201ENST00000624116 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
AC004943.3-201ENST00000624116 KRTAP3-2Q9BYR7 98 aa13.56□□□□□ -0.24
AC004943.3-201ENST00000624116 ARSIQ5FYB1 569 aa13.55□□□□□ -0.24
AC004943.3-201ENST00000624116 SLC34A2O95436 690 aa13.54□□□□□ -0.24
AC004943.3-201ENST00000624116 MMRN1Q13201 1228 aa13.53□□□□□ -0.24
AC004943.3-201ENST00000624116 ZNF687Q8N1G0 1237 aa13.5□□□□□ -0.25
AC004943.3-201ENST00000624116 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
AC004943.3-201ENST00000624116 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
AC004943.3-201ENST00000624116 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
AC004943.3-201ENST00000624116 FOXK1P85037 733 aa13.45□□□□□ -0.26
AC004943.3-201ENST00000624116 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
AC004943.3-201ENST00000624116 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
AC004943.3-201ENST00000624116 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC004943.3-201ENST00000624116 NUDT7P0C024 238 aa13.42□□□□□ -0.26
AC004943.3-201ENST00000624116 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
AC004943.3-201ENST00000624116 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
AC004943.3-201ENST00000624116 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
AC004943.3-201ENST00000624116 TBC1D12O60347 775 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 PBX2P40425 430 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 PTGER2P43116 358 aa13.36□□□□□ -0.27
AC004943.3-201ENST00000624116 DSG2Q14126 1118 aa13.35□□□□□ -0.27
AC004943.3-201ENST00000624116 LHX6Q9UPM6 363 aa13.35□□□□□ -0.27
AC004943.3-201ENST00000624116 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
AC004943.3-201ENST00000624116 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
AC004943.3-201ENST00000624116 PDE4AP27815 886 aa13.29□□□□□ -0.28
AC004943.3-201ENST00000624116 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
AC004943.3-201ENST00000624116 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
AC004943.3-201ENST00000624116 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
AC004943.3-201ENST00000624116 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
AC004943.3-201ENST00000624116 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
AC004943.3-201ENST00000624116 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
AC004943.3-201ENST00000624116 ARHGAP33O14559 1287 aa13.19□□□□□ -0.3
AC004943.3-201ENST00000624116 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
AC004943.3-201ENST00000624116 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
AC004943.3-201ENST00000624116 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
AC004943.3-201ENST00000624116 UPF1Q92900 1129 aaKnown RBP eCLIP13.17□□□□□ -0.3
AC004943.3-201ENST00000624116 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
AC004943.3-201ENST00000624116 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
AC004943.3-201ENST00000624116 POTEEQ6S8J3 1075 aa13.14□□□□□ -0.31
AC004943.3-201ENST00000624116 MFSD10Q14728 455 aa13.13□□□□□ -0.31
AC004943.3-201ENST00000624116 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
AC004943.3-201ENST00000624116 TK2O00142 265 aa13.1□□□□□ -0.31
AC004943.3-201ENST00000624116 ADGRD1Q6QNK2 874 aa13.1□□□□□ -0.31
AC004943.3-201ENST00000624116 ZNF454Q8N9F8 522 aa13.07□□□□□ -0.32
AC004943.3-201ENST00000624116 MAP3K9P80192 1104 aa13.06□□□□□ -0.32
AC004943.3-201ENST00000624116 EVI5O60447 810 aa13.05□□□□□ -0.32
AC004943.3-201ENST00000624116 PSEN2P49810 448 aa13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
AC004943.3-201ENST00000624116 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
AC004943.3-201ENST00000624116 BCL2L12Q9HB09 334 aa13.03□□□□□ -0.32
AC004943.3-201ENST00000624116 FOSBP53539 338 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 DMRTA1Q5VZB9 504 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
AC004943.3-201ENST00000624116 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
AC004943.3-201ENST00000624116 PTPREP23469 700 aa12.98□□□□□ -0.33
AC004943.3-201ENST00000624116 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
AC004943.3-201ENST00000624116 HRO43593 1189 aa12.97□□□□□ -0.33
AC004943.3-201ENST00000624116 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
AC004943.3-201ENST00000624116 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.33
AC004943.3-201ENST00000624116 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
AC004943.3-201ENST00000624116 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
AC004943.3-201ENST00000624116 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
AC004943.3-201ENST00000624116 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
AC004943.3-201ENST00000624116 VPS9D1Q9Y2B5 631 aa12.92□□□□□ -0.34
AC004943.3-201ENST00000624116 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
AC004943.3-201ENST00000624116 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
AC004943.3-201ENST00000624116 PHF14O94880 888 aa12.87□□□□□ -0.35
AC004943.3-201ENST00000624116 PCDHGA10Q9Y5H3 936 aa12.86□□□□□ -0.35
AC004943.3-201ENST00000624116 TYW1BQ6NUM6 668 aa12.85□□□□□ -0.35
AC004943.3-201ENST00000624116 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
AC004943.3-201ENST00000624116 KCTD12Q96CX2 325 aaKnown RBP12.84□□□□□ -0.35
AC004943.3-201ENST00000624116 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 DPYSL4O14531 572 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 NBPF3Q9H094 633 aa12.83□□□□□ -0.36
AC004943.3-201ENST00000624116 CFAP44Q96MT7 982 aa12.82□□□□□ -0.36
AC004943.3-201ENST00000624116 EPAS1Q99814 870 aa12.82□□□□□ -0.36
AC004943.3-201ENST00000624116 PAXIP1Q6ZW49 1069 aaPredicted RBP12.81□□□□□ -0.36
AC004943.3-201ENST00000624116 GOLGA8CPA6NN73 597 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms