RNA–Protein interactions for RNA: ENST00000622371.1

TMCO3-211, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-211ENST00000622371 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
TMCO3-211ENST00000622371 POTEDQ86YR6 584 aa12.29□□□□□ -0.44
TMCO3-211ENST00000622371 FAM117AQ9C073 453 aa12.29□□□□□ -0.44
TMCO3-211ENST00000622371 CAMK2BQ13554 666 aa12.27□□□□□ -0.44
TMCO3-211ENST00000622371 MAP3K13O43283 966 aa12.26□□□□□ -0.45
TMCO3-211ENST00000622371 APBB1O00213 710 aa12.22□□□□□ -0.45
TMCO3-211ENST00000622371 ZNF316A6NFI3 1004 aaPredicted RBP12.22□□□□□ -0.45
TMCO3-211ENST00000622371 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.46
TMCO3-211ENST00000622371 DPYSL4O14531 572 aa12.19□□□□□ -0.46
TMCO3-211ENST00000622371 PLEKHG3A1L390 1219 aa12.18□□□□□ -0.46
TMCO3-211ENST00000622371 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
TMCO3-211ENST00000622371 GPR37O15354 613 aa12.16□□□□□ -0.46
TMCO3-211ENST00000622371 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
TMCO3-211ENST00000622371 PPP1R15BQ5SWA1 713 aa12.14□□□□□ -0.47
TMCO3-211ENST00000622371 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
TMCO3-211ENST00000622371 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
TMCO3-211ENST00000622371 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
TMCO3-211ENST00000622371 CLUAP1Q96AJ1 413 aa12.08□□□□□ -0.48
TMCO3-211ENST00000622371 PDIA6Q15084 440 aa12.07□□□□□ -0.48
TMCO3-211ENST00000622371 DDRGK1Q96HY6 314 aa12.06□□□□□ -0.48
TMCO3-211ENST00000622371 CCDC82Q8N4S0 544 aa12.06□□□□□ -0.48
TMCO3-211ENST00000622371 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
TMCO3-211ENST00000622371 GOLGA2Q08379 1002 aa12.05□□□□□ -0.48
TMCO3-211ENST00000622371 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
TMCO3-211ENST00000622371 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
TMCO3-211ENST00000622371 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
TMCO3-211ENST00000622371 NUTM2FA1L443 756 aa12.03□□□□□ -0.48
TMCO3-211ENST00000622371 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.48
TMCO3-211ENST00000622371 FLIIQ13045 1269 aa12.02□□□□□ -0.48
TMCO3-211ENST00000622371 DSG2Q14126 1118 aa12.02□□□□□ -0.48
TMCO3-211ENST00000622371 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
TMCO3-211ENST00000622371 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
TMCO3-211ENST00000622371 FECHP22830 423 aa12.01□□□□□ -0.49
TMCO3-211ENST00000622371 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
TMCO3-211ENST00000622371 TMEM106CQ9BVX2 250 aa12.01□□□□□ -0.49
TMCO3-211ENST00000622371 IRF6O14896 467 aa12□□□□□ -0.49
TMCO3-211ENST00000622371 TRPC6Q9Y210 931 aa12□□□□□ -0.49
TMCO3-211ENST00000622371 AMHR2Q16671 573 aa11.99□□□□□ -0.49
TMCO3-211ENST00000622371 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
TMCO3-211ENST00000622371 PHF12Q96QT6 1004 aa11.98□□□□□ -0.49
TMCO3-211ENST00000622371 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
TMCO3-211ENST00000622371 ZBTB7CA1YPR0 619 aa11.96□□□□□ -0.49
TMCO3-211ENST00000622371 TRAK2O60296 914 aa11.95□□□□□ -0.5
TMCO3-211ENST00000622371 GNPATO15228 680 aa11.92□□□□□ -0.5
TMCO3-211ENST00000622371 MS4A1P11836 297 aa11.92□□□□□ -0.5
TMCO3-211ENST00000622371 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
TMCO3-211ENST00000622371 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
TMCO3-211ENST00000622371 A6NJR5 290 aa11.9□□□□□ -0.5
TMCO3-211ENST00000622371 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
TMCO3-211ENST00000622371 REPIN1Q9BWE0 567 aaKnown RBP11.89□□□□□ -0.51
TMCO3-211ENST00000622371 MCM6Q14566 821 aa11.89□□□□□ -0.51
TMCO3-211ENST00000622371 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
TMCO3-211ENST00000622371 ZNF777Q9ULD5 760 aaPredicted RBP11.89□□□□□ -0.51
TMCO3-211ENST00000622371 OSBPP22059 807 aa11.88□□□□□ -0.51
TMCO3-211ENST00000622371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.511e-8■□□□□ 9.8
TMCO3-211ENST00000622371 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
TMCO3-211ENST00000622371 FOXK1P85037 733 aa11.86□□□□□ -0.51
TMCO3-211ENST00000622371 HIC1Q14526 733 aa11.86□□□□□ -0.51
TMCO3-211ENST00000622371 DDX12PQ92771 950 aa11.86□□□□□ -0.51
TMCO3-211ENST00000622371 POM121Q96HA1 1249 aa11.86□□□□□ -0.51
TMCO3-211ENST00000622371 PCMTD1Q96MG8 357 aaPredicted RBP11.86□□□□□ -0.51
TMCO3-211ENST00000622371 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMCO3-211ENST00000622371 PLPP6Q8IY26 295 aa11.85□□□□□ -0.51
TMCO3-211ENST00000622371 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
TMCO3-211ENST00000622371 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
TMCO3-211ENST00000622371 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
TMCO3-211ENST00000622371 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
TMCO3-211ENST00000622371 MAP3K9P80192 1104 aa11.82□□□□□ -0.52
TMCO3-211ENST00000622371 FCHSD2O94868 740 aa11.82□□□□□ -0.52
TMCO3-211ENST00000622371 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
TMCO3-211ENST00000622371 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
TMCO3-211ENST00000622371 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
TMCO3-211ENST00000622371 PROSER2Q86WR7 435 aaPredicted RBP11.8□□□□□ -0.52
TMCO3-211ENST00000622371 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
TMCO3-211ENST00000622371 KCTD17Q8N5Z5 321 aa11.78□□□□□ -0.52
TMCO3-211ENST00000622371 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
TMCO3-211ENST00000622371 PTGDRQ13258 359 aa11.76□□□□□ -0.53
TMCO3-211ENST00000622371 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
TMCO3-211ENST00000622371 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
TMCO3-211ENST00000622371 SH3D19Q5HYK7 790 aa11.75□□□□□ -0.53
TMCO3-211ENST00000622371 FNBP4Q8N3X1 1017 aaPredicted RBP11.75□□□□□ -0.53
TMCO3-211ENST00000622371 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
TMCO3-211ENST00000622371 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
TMCO3-211ENST00000622371 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
TMCO3-211ENST00000622371 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
TMCO3-211ENST00000622371 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.53
TMCO3-211ENST00000622371 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
TMCO3-211ENST00000622371 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.54
TMCO3-211ENST00000622371 TRIM35Q9UPQ4 493 aa11.7□□□□□ -0.54
TMCO3-211ENST00000622371 KIF3CO14782 793 aa11.69□□□□□ -0.54
TMCO3-211ENST00000622371 TRAIPQ9BWF2 469 aa11.69□□□□□ -0.54
TMCO3-211ENST00000622371 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
TMCO3-211ENST00000622371 RETREG2Q8NC44 543 aa11.68□□□□□ -0.54
TMCO3-211ENST00000622371 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
TMCO3-211ENST00000622371 RAD21O60216 631 aa11.68□□□□□ -0.54
TMCO3-211ENST00000622371 PDCD7Q8N8D1 485 aaKnown RBP11.68□□□□□ -0.54
TMCO3-211ENST00000622371 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
TMCO3-211ENST00000622371 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
TMCO3-211ENST00000622371 PTGER2P43116 358 aa11.67□□□□□ -0.54
TMCO3-211ENST00000622371 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms