RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ATMINO43313 823 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-213ENST00000622183 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
CPNE3-213ENST00000622183 IRX5P78411 483 aaPredicted RBP10.46□□□□□ -0.73
CPNE3-213ENST00000622183 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.73
CPNE3-213ENST00000622183 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
CPNE3-213ENST00000622183 DSG2Q14126 1118 aa10.43□□□□□ -0.74
CPNE3-213ENST00000622183 TMC2Q8TDI7 906 aa10.43□□□□□ -0.74
CPNE3-213ENST00000622183 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
CPNE3-213ENST00000622183 FOXK1P85037 733 aa10.41□□□□□ -0.74
CPNE3-213ENST00000622183 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
CPNE3-213ENST00000622183 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
CPNE3-213ENST00000622183 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
CPNE3-213ENST00000622183 DPYSL4O14531 572 aa10.38□□□□□ -0.75
CPNE3-213ENST00000622183 PLCG2P16885 1265 aa10.38□□□□□ -0.75
CPNE3-213ENST00000622183 G3V3G9 751 aa10.37□□□□□ -0.75
CPNE3-213ENST00000622183 PDIA6Q15084 440 aa10.37□□□□□ -0.75
CPNE3-213ENST00000622183 C2orf72A6NCS6 295 aa10.36□□□□□ -0.75
CPNE3-213ENST00000622183 KIF3CO14782 793 aa10.36□□□□□ -0.75
CPNE3-213ENST00000622183 ZMYND10O75800 440 aa10.36□□□□□ -0.75
CPNE3-213ENST00000622183 MLLT3P42568 568 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-213ENST00000622183 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
CPNE3-213ENST00000622183 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
CPNE3-213ENST00000622183 GABBR2O75899 941 aa10.34□□□□□ -0.75
CPNE3-213ENST00000622183 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
CPNE3-213ENST00000622183 BRPF1P55201 1214 aaPredicted RBP10.33□□□□□ -0.76
CPNE3-213ENST00000622183 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
CPNE3-213ENST00000622183 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
CPNE3-213ENST00000622183 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
CPNE3-213ENST00000622183 GPIHBP1Q8IV16 184 aa10.3□□□□□ -0.76
CPNE3-213ENST00000622183 PELP1Q8IZL8 1130 aaKnown RBP10.29□□□□□ -0.76
CPNE3-213ENST00000622183 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
CPNE3-213ENST00000622183 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
CPNE3-213ENST00000622183 SEC24BO95487 1268 aa10.28□□□□□ -0.76
CPNE3-213ENST00000622183 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.77
CPNE3-213ENST00000622183 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
CPNE3-213ENST00000622183 TMEM92Q6UXU6 159 aa10.26□□□□□ -0.77
CPNE3-213ENST00000622183 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
CPNE3-213ENST00000622183 MAP3K9P80192 1104 aa10.25□□□□□ -0.77
CPNE3-213ENST00000622183 C7P10643 843 aa10.24□□□□□ -0.77
CPNE3-213ENST00000622183 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
CPNE3-213ENST00000622183 AK7Q96M32 723 aa10.22□□□□□ -0.77
CPNE3-213ENST00000622183 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
CPNE3-213ENST00000622183 UPF1Q92900 1129 aaKnown RBP eCLIP10.21□□□□□ -0.77
CPNE3-213ENST00000622183 GPR37O15354 613 aa10.19□□□□□ -0.78
CPNE3-213ENST00000622183 PTGER2P43116 358 aa10.19□□□□□ -0.78
CPNE3-213ENST00000622183 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
CPNE3-213ENST00000622183 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
CPNE3-213ENST00000622183 METRNQ9UJH8 293 aa10.18□□□□□ -0.78
CPNE3-213ENST00000622183 POTEHQ6S545 545 aa10.17□□□□□ -0.78
CPNE3-213ENST00000622183 TBC1D12O60347 775 aa10.16□□□□□ -0.78
CPNE3-213ENST00000622183 C3orf67Q6ZVT6 689 aa10.16□□□□□ -0.78
CPNE3-213ENST00000622183 OSBPP22059 807 aa10.15□□□□□ -0.78
CPNE3-213ENST00000622183 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CPNE3-213ENST00000622183 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
CPNE3-213ENST00000622183 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
CPNE3-213ENST00000622183 PTCD2Q8WV60 388 aaKnown RBP10.14□□□□□ -0.79
CPNE3-213ENST00000622183 NUTM2FA1L443 756 aa10.13□□□□□ -0.79
CPNE3-213ENST00000622183 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-213ENST00000622183 TRIM66O15016 1216 aa10.12□□□□□ -0.79
CPNE3-213ENST00000622183 EVI5O60447 810 aa10.12□□□□□ -0.79
CPNE3-213ENST00000622183 SLC34A2O95436 690 aa10.12□□□□□ -0.79
CPNE3-213ENST00000622183 DDX12PQ92771 950 aa10.12□□□□□ -0.79
CPNE3-213ENST00000622183 MINK1Q8N4C8 1332 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-213ENST00000622183 PDE4DQ08499 809 aa10.09□□□□□ -0.79
CPNE3-213ENST00000622183 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-213ENST00000622183 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
CPNE3-213ENST00000622183 FCHSD2O94868 740 aa10.08□□□□□ -0.8
CPNE3-213ENST00000622183 MAP2K5Q13163 448 aa10.08□□□□□ -0.8
CPNE3-213ENST00000622183 HIC1Q14526 733 aa10.08□□□□□ -0.8
CPNE3-213ENST00000622183 GNPATO15228 680 aa10.07□□□□□ -0.8
CPNE3-213ENST00000622183 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
CPNE3-213ENST00000622183 IRF6O14896 467 aa10.06□□□□□ -0.8
CPNE3-213ENST00000622183 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
CPNE3-213ENST00000622183 KDM4CQ9H3R0 1056 aa10.06□□□□□ -0.8
CPNE3-213ENST00000622183 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
CPNE3-213ENST00000622183 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.05□□□□□ -0.8
CPNE3-213ENST00000622183 CCDC102AQ96A19 550 aa10.04□□□□□ -0.8
CPNE3-213ENST00000622183 PTGDRQ13258 359 aa10.03□□□□□ -0.8
CPNE3-213ENST00000622183 PHF14O94880 888 aa10.01□□□□□ -0.81
CPNE3-213ENST00000622183 AMHR2Q16671 573 aa10.01□□□□□ -0.81
CPNE3-213ENST00000622183 EPAS1Q99814 870 aa10.01□□□□□ -0.81
CPNE3-213ENST00000622183 FECHP22830 423 aa10□□□□□ -0.81
CPNE3-213ENST00000622183 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
CPNE3-213ENST00000622183 C14orf37Q86TY3 774 aa9.99□□□□□ -0.81
CPNE3-213ENST00000622183 IL27Q8NEV9 243 aa9.99□□□□□ -0.81
CPNE3-213ENST00000622183 PCDHGA4Q9Y5G9 962 aa9.99□□□□□ -0.81
CPNE3-213ENST00000622183 PCDHGA10Q9Y5H3 936 aa9.97□□□□□ -0.81
CPNE3-213ENST00000622183 KDM4FA0A1W2PPD8 638 aa9.96□□□□□ -0.82
CPNE3-213ENST00000622183 MAP3K7O43318 606 aa9.96□□□□□ -0.82
CPNE3-213ENST00000622183 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
CPNE3-213ENST00000622183 TYW1BQ6NUM6 668 aa9.95□□□□□ -0.82
CPNE3-213ENST00000622183 SLAIN1Q8ND83 568 aa9.95□□□□□ -0.82
CPNE3-213ENST00000622183 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
CPNE3-213ENST00000622183 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-213ENST00000622183 FBXW7Q969H0 707 aa9.94□□□□□ -0.82
CPNE3-213ENST00000622183 JPH4Q96JJ6 628 aa9.94□□□□□ -0.82
CPNE3-213ENST00000622183 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
CPNE3-213ENST00000622183 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
CPNE3-213ENST00000622183 DDRGK1Q96HY6 314 aa9.92□□□□□ -0.82
CPNE3-213ENST00000622183 FOSBP53539 338 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms