RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 FER1L4A9Z1Z3 1794 aa7.25□□□□□ -1.25
LINC00649-219ENST00000622171 HECW2Q9P2P5 1572 aa7.25□□□□□ -1.25
LINC00649-219ENST00000622171 NEO1Q92859 1461 aa7.25□□□□□ -1.25
LINC00649-219ENST00000622171 FYCO1Q9BQS8 1478 aa7.25□□□□□ -1.25
LINC00649-219ENST00000622171 TROQ12816 1431 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-219ENST00000622171 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
LINC00649-219ENST00000622171 ARID4BQ4LE39 1312 aaPredicted RBP7.25□□□□□ -1.25
LINC00649-219ENST00000622171 DENND4BO75064 1496 aaPredicted RBP7.24□□□□□ -1.25
LINC00649-219ENST00000622171 ZFYVE16Q7Z3T8 1539 aa7.24□□□□□ -1.25
LINC00649-219ENST00000622171 MLECQ14165 292 aa7.24□□□□□ -1.25
LINC00649-219ENST00000622171 ABCA6Q8N139 1617 aa7.23□□□□□ -1.25
LINC00649-219ENST00000622171 ADAMTSL3P82987 1691 aa7.23□□□□□ -1.25
LINC00649-219ENST00000622171 SCAPERQ9BY12 1400 aa7.23□□□□□ -1.25
LINC00649-219ENST00000622171 SAMD9LQ8IVG5 1584 aa7.23□□□□□ -1.25
LINC00649-219ENST00000622171 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
LINC00649-219ENST00000622171 SYCP2Q9BX26 1530 aa7.22□□□□□ -1.25
LINC00649-219ENST00000622171 POGZQ7Z3K3 1410 aa7.22□□□□□ -1.25
LINC00649-219ENST00000622171 MYT1LQ9UL68 1186 aa7.22□□□□□ -1.25
LINC00649-219ENST00000622171 ZNF777Q9ULD5 760 aaPredicted RBP7.22□□□□□ -1.25
LINC00649-219ENST00000622171 ABCC1P33527 1531 aa7.22□□□□□ -1.25
LINC00649-219ENST00000622171 ZMYM4Q5VZL5 1548 aa7.22□□□□□ -1.25
LINC00649-219ENST00000622171 SUPT6HQ7KZ85 1726 aaKnown RBP7.21□□□□□ -1.25
LINC00649-219ENST00000622171 TIAM1Q13009 1591 aa7.21□□□□□ -1.25
LINC00649-219ENST00000622171 PLCH2O75038 1416 aa7.21□□□□□ -1.25
LINC00649-219ENST00000622171 ARHGEF12Q9NZN5 1544 aa7.21□□□□□ -1.26
LINC00649-219ENST00000622171 DIP2CQ9Y2E4 1556 aa7.2□□□□□ -1.26
LINC00649-219ENST00000622171 KIDINS220Q9ULH0 1771 aa7.2□□□□□ -1.26
LINC00649-219ENST00000622171 TRAPPC8Q9Y2L5 1435 aa7.19□□□□□ -1.26
LINC00649-219ENST00000622171 MTUS2Q5JR59 1369 aa7.19□□□□□ -1.26
LINC00649-219ENST00000622171 PTPRMP28827 1452 aa7.18□□□□□ -1.26
LINC00649-219ENST00000622171 EHBP1L1Q8N3D4 1523 aa7.18□□□□□ -1.26
LINC00649-219ENST00000622171 KDM5CP41229 1560 aa7.18□□□□□ -1.26
LINC00649-219ENST00000622171 AFAP1Q8N556 730 aa7.18□□□□□ -1.26
LINC00649-219ENST00000622171 CDK11AQ9UQ88 783 aaPredicted RBP7.18□□□□□ -1.26
LINC00649-219ENST00000622171 GPATCH8Q9UKJ3 1502 aaKnown RBP7.17□□□□□ -1.26
LINC00649-219ENST00000622171 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
LINC00649-219ENST00000622171 EFCAB2Q5VUJ9 269 aa7.16□□□□□ -1.26
LINC00649-219ENST00000622171 ZNF644Q9H582 1327 aaPredicted RBP7.16□□□□□ -1.26
LINC00649-219ENST00000622171 ZNF518AQ6AHZ1 1483 aa7.16□□□□□ -1.26
LINC00649-219ENST00000622171 HNRNPMP52272 730 aaKnown RBP eCLIP7.15□□□□□ -1.26
LINC00649-219ENST00000622171 PHLDB1Q86UU1 1377 aa7.15□□□□□ -1.26
LINC00649-219ENST00000622171 CCNB3Q8WWL7 1395 aa7.15□□□□□ -1.26
LINC00649-219ENST00000622171 C9orf84Q5VXU9 1444 aa7.15□□□□□ -1.27
LINC00649-219ENST00000622171 INO80Q9ULG1 1556 aaPredicted RBP7.15□□□□□ -1.27
LINC00649-219ENST00000622171 C3P01024 1663 aa7.15□□□□□ -1.27
LINC00649-219ENST00000622171 CLTCQ00610 1675 aaKnown RBP7.15□□□□□ -1.27
LINC00649-219ENST00000622171 CFAP65Q6ZU64 1925 aaKnown RBP7.15□□□□□ -1.27
LINC00649-219ENST00000622171 CEBPAP49715 358 aaPredicted RBP7.14□□□□□ -1.27
LINC00649-219ENST00000622171 HSPA2P54652 639 aa7.14□□□□□ -1.27
LINC00649-219ENST00000622171 ATP7AQ04656 1500 aa7.14□□□□□ -1.27
LINC00649-219ENST00000622171 NCOA2Q15596 1464 aa7.14□□□□□ -1.27
LINC00649-219ENST00000622171 VPS8Q8N3P4 1428 aa7.14□□□□□ -1.27
LINC00649-219ENST00000622171 ATP10AO60312 1499 aa7.13□□□□□ -1.27
LINC00649-219ENST00000622171 CAMSAP2Q08AD1 1489 aa7.13□□□□□ -1.27
LINC00649-219ENST00000622171 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
LINC00649-219ENST00000622171 CFDP1Q9UEE9 299 aaPredicted RBP7.12□□□□□ -1.27
LINC00649-219ENST00000622171 PREX1Q8TCU6 1659 aa7.12□□□□□ -1.27
LINC00649-219ENST00000622171 LMTK3Q96Q04 1460 aa7.11□□□□□ -1.27
LINC00649-219ENST00000622171 PPARGC1BQ86YN6 1023 aaKnown RBP7.11□□□□□ -1.27
LINC00649-219ENST00000622171 LRRC9Q6ZRR7 1453 aa7.11□□□□□ -1.27
LINC00649-219ENST00000622171 MAGI2Q86UL8 1455 aa7.11□□□□□ -1.27
LINC00649-219ENST00000622171 CEP152O94986 1710 aa7.1□□□□□ -1.27
LINC00649-219ENST00000622171 CROCC2H7BZ55 1655 aa7.09□□□□□ -1.27
LINC00649-219ENST00000622171 SPAG9O60271 1321 aaKnown RBP7.09□□□□□ -1.27
LINC00649-219ENST00000622171 MLH3Q9UHC1 1453 aa7.09□□□□□ -1.27
LINC00649-219ENST00000622171 PLXNC1O60486 1568 aa7.08□□□□□ -1.28
LINC00649-219ENST00000622171 REREQ9P2R6 1566 aa7.08□□□□□ -1.28
LINC00649-219ENST00000622171 A2MP01023 1474 aa7.07□□□□□ -1.28
LINC00649-219ENST00000622171 PTPN23Q9H3S7 1636 aa7.07□□□□□ -1.28
LINC00649-219ENST00000622171 STRCQ7RTU9 1775 aa7.07□□□□□ -1.28
LINC00649-219ENST00000622171 CCDC141Q6ZP82 1450 aa7.06□□□□□ -1.28
LINC00649-219ENST00000622171 MBD5Q9P267 1494 aa7.06□□□□□ -1.28
LINC00649-219ENST00000622171 MYO3AQ8NEV4 1616 aa7.06□□□□□ -1.28
LINC00649-219ENST00000622171 GGT6Q6P531 493 aa7.06□□□□□ -1.28
LINC00649-219ENST00000622171 MROH2AA6NES4 1674 aa7.06□□□□□ -1.28
LINC00649-219ENST00000622171 PLEKHH2Q8IVE3 1493 aa7.05□□□□□ -1.28
LINC00649-219ENST00000622171 AGLP35573 1532 aa7.05□□□□□ -1.28
LINC00649-219ENST00000622171 ARHGEF5Q12774 1597 aa7.04□□□□□ -1.28
LINC00649-219ENST00000622171 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
LINC00649-219ENST00000622171 ILDR1Q86SU0 546 aaPredicted RBP7.04□□□□□ -1.28
LINC00649-219ENST00000622171 SETD1BQ9UPS6 1966 aaKnown RBP7.04□□□□□ -1.28
LINC00649-219ENST00000622171 KIAA1107Q9UPP5 1409 aa7.03□□□□□ -1.28
LINC00649-219ENST00000622171 ESF1Q9H501 851 aaKnown RBP7.03□□□□□ -1.28
LINC00649-219ENST00000622171 DNMT1P26358 1616 aaKnown RBP7.02□□□□□ -1.29
LINC00649-219ENST00000622171 APLP2Q06481 763 aa7.02□□□□□ -1.29
LINC00649-219ENST00000622171 CHIC2Q9UKJ5 165 aa7.02□□□□□ -1.29
LINC00649-219ENST00000622171 UHRF1BP1Q6BDS2 1440 aa7.01□□□□□ -1.29
LINC00649-219ENST00000622171 CAMSAP1Q5T5Y3 1602 aa7.01□□□□□ -1.29
LINC00649-219ENST00000622171 MROH1Q8NDA8 1641 aa7.01□□□□□ -1.29
LINC00649-219ENST00000622171 ZNF142P52746 1687 aaPredicted RBP7.01□□□□□ -1.29
LINC00649-219ENST00000622171 KIF3BO15066 747 aa7.01□□□□□ -1.29
LINC00649-219ENST00000622171 MAST1Q9Y2H9 1570 aa7□□□□□ -1.29
LINC00649-219ENST00000622171 CEP170BQ9Y4F5 1589 aaPredicted RBP7□□□□□ -1.29
LINC00649-219ENST00000622171 FAM50AQ14320 339 aaKnown RBP7□□□□□ -1.29
LINC00649-219ENST00000622171 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
LINC00649-219ENST00000622171 RNF17Q9BXT8 1623 aaKnown RBP7□□□□□ -1.29
LINC00649-219ENST00000622171 MAP3K1Q13233 1512 aa7□□□□□ -1.29
LINC00649-219ENST00000622171 KDM5DQ9BY66 1539 aa7□□□□□ -1.29
LINC00649-219ENST00000622171 FGD6Q6ZV73 1430 aa7□□□□□ -1.29
LINC00649-219ENST00000622171 MYO5BQ9ULV0 1848 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms