RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
DDX1-208ENST00000621973 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
DDX1-208ENST00000621973 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
DDX1-208ENST00000621973 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
DDX1-208ENST00000621973 PPP1R37O75864 691 aa9.84□□□□□ -0.83
DDX1-208ENST00000621973 PUS7Q96PZ0 661 aaKnown RBP9.84□□□□□ -0.83
DDX1-208ENST00000621973 PCDHB8Q9UN66 801 aa9.83□□□□□ -0.84
DDX1-208ENST00000621973 PCDHB13Q9Y5F0 798 aa9.83□□□□□ -0.84
DDX1-208ENST00000621973 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
DDX1-208ENST00000621973 TMCO4Q5TGY1 634 aa9.81□□□□□ -0.84
DDX1-208ENST00000621973 TSPYL2Q9H2G4 693 aaPredicted RBP9.81□□□□□ -0.84
DDX1-208ENST00000621973 PSEN1P49768 467 aa9.8□□□□□ -0.84
DDX1-208ENST00000621973 BARGINQ6ZT62 677 aa9.8□□□□□ -0.84
DDX1-208ENST00000621973 FBXO22Q8NEZ5 403 aa9.79□□□□□ -0.84
DDX1-208ENST00000621973 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
DDX1-208ENST00000621973 RB1CC1Q8TDY2 1594 aa9.78□□□□□ -0.84
DDX1-208ENST00000621973 SMYD5Q6GMV2 418 aa9.77□□□□□ -0.85
DDX1-208ENST00000621973 POTEDQ86YR6 584 aa9.77□□□□□ -0.85
DDX1-208ENST00000621973 ZNF579Q8NAF0 562 aaKnown RBP9.77□□□□□ -0.85
DDX1-208ENST00000621973 GZF1Q9H116 711 aaPredicted RBP9.76□□□□□ -0.85
DDX1-208ENST00000621973 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
DDX1-208ENST00000621973 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
DDX1-208ENST00000621973 TRAK2O60296 914 aa9.75□□□□□ -0.85
DDX1-208ENST00000621973 NLRP6P59044 892 aa9.75□□□□□ -0.85
DDX1-208ENST00000621973 AK7Q96M32 723 aa9.75□□□□□ -0.85
DDX1-208ENST00000621973 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
DDX1-208ENST00000621973 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
DDX1-208ENST00000621973 CACNB1Q02641 598 aaPredicted RBP9.73□□□□□ -0.85
DDX1-208ENST00000621973 EFCAB3Q8N7B9 438 aa9.73□□□□□ -0.85
DDX1-208ENST00000621973 CCDC61Q9Y6R9 512 aa9.73□□□□□ -0.85
DDX1-208ENST00000621973 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
DDX1-208ENST00000621973 SOX12O15370 315 aa9.72□□□□□ -0.85
DDX1-208ENST00000621973 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
DDX1-208ENST00000621973 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
DDX1-208ENST00000621973 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
DDX1-208ENST00000621973 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
DDX1-208ENST00000621973 FLIIQ13045 1269 aa9.7□□□□□ -0.86
DDX1-208ENST00000621973 MFSD10Q14728 455 aa9.7□□□□□ -0.86
DDX1-208ENST00000621973 CABP2Q9NPB3 220 aa9.69□□□□□ -0.86
DDX1-208ENST00000621973 IRF5Q13568 498 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 A6NJR5 290 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 PDE4AP27815 886 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 PDE4DQ08499 809 aa9.68□□□□□ -0.86
DDX1-208ENST00000621973 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
DDX1-208ENST00000621973 FARP1Q9Y4F1 1045 aaPredicted RBP9.67□□□□□ -0.86
DDX1-208ENST00000621973 E9PSI1 815 aa9.67□□□□□ -0.86
DDX1-208ENST00000621973 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
DDX1-208ENST00000621973 PLEKHG3A1L390 1219 aa9.66□□□□□ -0.86
DDX1-208ENST00000621973 CRISPLD2Q9H0B8 497 aa9.66□□□□□ -0.86
DDX1-208ENST00000621973 USP35Q9P2H5 1018 aa9.66□□□□□ -0.86
DDX1-208ENST00000621973 TRIM66O15016 1216 aa9.65□□□□□ -0.86
DDX1-208ENST00000621973 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
DDX1-208ENST00000621973 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
DDX1-208ENST00000621973 RBM26Q5T8P6 1007 aaKnown RBP9.64□□□□□ -0.87
DDX1-208ENST00000621973 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
DDX1-208ENST00000621973 WIZO95785 1651 aa9.64□□□□□ -0.87
DDX1-208ENST00000621973 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
DDX1-208ENST00000621973 BAZ1AQ9NRL2 1556 aaPredicted RBP9.63□□□□□ -0.87
DDX1-208ENST00000621973 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
DDX1-208ENST00000621973 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
DDX1-208ENST00000621973 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
DDX1-208ENST00000621973 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
DDX1-208ENST00000621973 PCGF6Q9BYE7 350 aa9.6□□□□□ -0.87
DDX1-208ENST00000621973 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
DDX1-208ENST00000621973 MAP3K13O43283 966 aa9.58□□□□□ -0.88
DDX1-208ENST00000621973 FAM177A1Q8N128 213 aaPredicted RBP9.58□□□□□ -0.88
DDX1-208ENST00000621973 UNC13AQ9UPW8 1703 aa9.57□□□□□ -0.88
DDX1-208ENST00000621973 KIF12Q96FN5 646 aa9.56□□□□□ -0.88
DDX1-208ENST00000621973 SMARCA4P51532 1647 aa9.55□□□□□ -0.88
DDX1-208ENST00000621973 CCDC97Q96F63 343 aaPredicted RBP9.54□□□□□ -0.88
DDX1-208ENST00000621973 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
DDX1-208ENST00000621973 MCM6Q14566 821 aa9.53□□□□□ -0.88
DDX1-208ENST00000621973 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
DDX1-208ENST00000621973 EIF4G1Q04637 1599 aaKnown RBP9.53□□□□□ -0.88
DDX1-208ENST00000621973 PAK3O75914 559 aaPredicted RBP9.52□□□□□ -0.89
DDX1-208ENST00000621973 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
DDX1-208ENST00000621973 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
DDX1-208ENST00000621973 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
DDX1-208ENST00000621973 PRKAR2AP13861 404 aaKnown RBP9.49□□□□□ -0.89
DDX1-208ENST00000621973 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
DDX1-208ENST00000621973 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
DDX1-208ENST00000621973 BICRAQ9NZM4 1560 aa9.49□□□□□ -0.89
DDX1-208ENST00000621973 PPP1R15BQ5SWA1 713 aa9.48□□□□□ -0.89
DDX1-208ENST00000621973 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
DDX1-208ENST00000621973 CCDC88BA6NC98 1476 aa9.48□□□□□ -0.89
DDX1-208ENST00000621973 GPR37O15354 613 aa9.47□□□□□ -0.89
DDX1-208ENST00000621973 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
DDX1-208ENST00000621973 POLR3GLQ9BT43 218 aa9.47□□□□□ -0.89
DDX1-208ENST00000621973 DPYSL4O14531 572 aa9.46□□□□□ -0.89
DDX1-208ENST00000621973 BRD2P25440 801 aaKnown RBP9.46□□□□□ -0.89
DDX1-208ENST00000621973 PDIA6Q15084 440 aa9.46□□□□□ -0.89
DDX1-208ENST00000621973 GPHNQ9NQX3 736 aaPredicted RBP9.46□□□□□ -0.89
DDX1-208ENST00000621973 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
DDX1-208ENST00000621973 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
DDX1-208ENST00000621973 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
DDX1-208ENST00000621973 GOLGA2Q08379 1002 aa9.44□□□□□ -0.9
DDX1-208ENST00000621973 UNCXA6NJT0 531 aa9.43□□□□□ -0.9
DDX1-208ENST00000621973 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms