RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
SBDS-205ENST00000617799 KANK4Q5T7N3 995 aaPredicted RBP26.85■■□□□ 1.89
SBDS-205ENST00000617799 EFCAB2Q5VUJ9 269 aa26.85■■□□□ 1.89
SBDS-205ENST00000617799 AKNAQ7Z591 1439 aa26.84■■□□□ 1.89
SBDS-205ENST00000617799 COL17A1Q9UMD9 1497 aaPredicted RBP26.84■■□□□ 1.89
SBDS-205ENST00000617799 NCOA2Q15596 1464 aa26.83■■□□□ 1.89
SBDS-205ENST00000617799 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
SBDS-205ENST00000617799 ADGRL1O94910 1474 aa26.81■■□□□ 1.88
SBDS-205ENST00000617799 GPATCH8Q9UKJ3 1502 aaKnown RBP26.8■■□□□ 1.88
SBDS-205ENST00000617799 CFDP1Q9UEE9 299 aaPredicted RBP26.76■■□□□ 1.87
SBDS-205ENST00000617799 ZNF777Q9ULD5 760 aaPredicted RBP26.76■■□□□ 1.87
SBDS-205ENST00000617799 DENND4BO75064 1496 aaPredicted RBP26.75■■□□□ 1.87
SBDS-205ENST00000617799 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
SBDS-205ENST00000617799 RAPGEF3O95398 923 aa26.73■■□□□ 1.87
SBDS-205ENST00000617799 ABCC1P33527 1531 aa26.7■■□□□ 1.87
SBDS-205ENST00000617799 FRMPD1Q5SYB0 1578 aa26.7■■□□□ 1.86
SBDS-205ENST00000617799 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
SBDS-205ENST00000617799 RICTORQ6R327 1708 aa26.7■■□□□ 1.86
SBDS-205ENST00000617799 POGZQ7Z3K3 1410 aa26.67■■□□□ 1.86
SBDS-205ENST00000617799 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
SBDS-205ENST00000617799 PLEKHH2Q8IVE3 1493 aa26.64■■□□□ 1.86
SBDS-205ENST00000617799 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.85
SBDS-205ENST00000617799 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
SBDS-205ENST00000617799 PPARGC1BQ86YN6 1023 aaKnown RBP26.61■■□□□ 1.85
SBDS-205ENST00000617799 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
SBDS-205ENST00000617799 ZNF644Q9H582 1327 aaPredicted RBP26.6■■□□□ 1.85
SBDS-205ENST00000617799 ZMYM4Q5VZL5 1548 aa26.6■■□□□ 1.85
SBDS-205ENST00000617799 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
SBDS-205ENST00000617799 MYT1LQ9UL68 1186 aa26.58■■□□□ 1.85
SBDS-205ENST00000617799 TRAPPC8Q9Y2L5 1435 aa26.57■■□□□ 1.84
SBDS-205ENST00000617799 HNRNPMP52272 730 aaKnown RBP eCLIP26.57■■□□□ 1.84
SBDS-205ENST00000617799 AFAP1Q8N556 730 aa26.57■■□□□ 1.84
SBDS-205ENST00000617799 KIAA1107Q9UPP5 1409 aa26.56■■□□□ 1.84
SBDS-205ENST00000617799 MIA2Q96PC5 1412 aa26.56■■□□□ 1.84
SBDS-205ENST00000617799 KDM5CP41229 1560 aa26.55■■□□□ 1.84
SBDS-205ENST00000617799 ZFYVE16Q7Z3T8 1539 aa26.55■■□□□ 1.84
SBDS-205ENST00000617799 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
SBDS-205ENST00000617799 HECW2Q9P2P5 1572 aa26.54■■□□□ 1.84
SBDS-205ENST00000617799 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
SBDS-205ENST00000617799 FGD6Q6ZV73 1430 aa26.5■■□□□ 1.83
SBDS-205ENST00000617799 PTPN23Q9H3S7 1636 aa26.5■■□□□ 1.83
SBDS-205ENST00000617799 YEATS2Q9ULM3 1422 aa26.48■■□□□ 1.83
SBDS-205ENST00000617799 MBD5Q9P267 1494 aa26.47■■□□□ 1.83
SBDS-205ENST00000617799 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
SBDS-205ENST00000617799 CCDC141Q6ZP82 1450 aa26.46■■□□□ 1.83
SBDS-205ENST00000617799 MLH3Q9UHC1 1453 aa26.45■■□□□ 1.82
SBDS-205ENST00000617799 ARHGEF5Q12774 1597 aa26.44■■□□□ 1.82
SBDS-205ENST00000617799 ATP7AQ04656 1500 aa26.42■■□□□ 1.82
SBDS-205ENST00000617799 ABCA6Q8N139 1617 aa26.42■■□□□ 1.82
SBDS-205ENST00000617799 INO80Q9ULG1 1556 aaPredicted RBP26.41■■□□□ 1.82
SBDS-205ENST00000617799 KIDINS220Q9ULH0 1771 aa26.41■■□□□ 1.82
SBDS-205ENST00000617799 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
SBDS-205ENST00000617799 FAM50AQ14320 339 aaKnown RBP26.4■■□□□ 1.82
SBDS-205ENST00000617799 RSPH4AQ5TD94 716 aa26.4■■□□□ 1.82
SBDS-205ENST00000617799 TCOF1Q13428 1488 aaKnown RBP26.4■■□□□ 1.82
SBDS-205ENST00000617799 ATP10AO60312 1499 aa26.39■■□□□ 1.82
SBDS-205ENST00000617799 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.81
SBDS-205ENST00000617799 C9orf84Q5VXU9 1444 aa26.38■■□□□ 1.81
SBDS-205ENST00000617799 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
SBDS-205ENST00000617799 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
SBDS-205ENST00000617799 CROCC2H7BZ55 1655 aa26.33■■□□□ 1.81
SBDS-205ENST00000617799 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
SBDS-205ENST00000617799 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
SBDS-205ENST00000617799 SIGLEC1Q9BZZ2 1709 aa26.3■■□□□ 1.8
SBDS-205ENST00000617799 DAPK1P53355 1430 aa26.3■■□□□ 1.8
SBDS-205ENST00000617799 REREQ9P2R6 1566 aa26.29■■□□□ 1.8
SBDS-205ENST00000617799 ADGBQ8N7X0 1667 aa26.29■■□□□ 1.8
SBDS-205ENST00000617799 KDM4FA0A1W2PPD8 638 aa26.29■■□□□ 1.8
SBDS-205ENST00000617799 MAST1Q9Y2H9 1570 aa26.29■■□□□ 1.8
SBDS-205ENST00000617799 ABCC5O15440 1437 aa26.28■■□□□ 1.8
SBDS-205ENST00000617799 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
SBDS-205ENST00000617799 SHANK2Q9UPX8 1470 aa26.26■■□□□ 1.79
SBDS-205ENST00000617799 A2MP01023 1474 aa26.25■■□□□ 1.79
SBDS-205ENST00000617799 BCORL1Q5H9F3 1711 aa26.25■■□□□ 1.79
SBDS-205ENST00000617799 MLECQ14165 292 aa26.23■■□□□ 1.79
SBDS-205ENST00000617799 PLXNC1O60486 1568 aa26.21■■□□□ 1.79
SBDS-205ENST00000617799 RRBP1Q9P2E9 1410 aaKnown RBP26.21■■□□□ 1.79
SBDS-205ENST00000617799 AGLP35573 1532 aa26.19■■□□□ 1.78
SBDS-205ENST00000617799 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
SBDS-205ENST00000617799 ITGAEP38570 1179 aa26.18■■□□□ 1.78
SBDS-205ENST00000617799 ADAMTSL3P82987 1691 aa26.17■■□□□ 1.78
SBDS-205ENST00000617799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.17■■□□□ 1.78
SBDS-205ENST00000617799 MADDQ8WXG6 1647 aa26.16■■□□□ 1.78
SBDS-205ENST00000617799 DHX29Q7Z478 1369 aaKnown RBP26.16■■□□□ 1.78
SBDS-205ENST00000617799 ANKRD30AQ9BXX3 1397 aa26.15■■□□□ 1.78
SBDS-205ENST00000617799 KIF15Q9NS87 1388 aa26.13■■□□□ 1.77
SBDS-205ENST00000617799 RRP7BPQ9NSQ0 103 aa26.13■■□□□ 1.77
SBDS-205ENST00000617799 FER1L4A9Z1Z3 1794 aa26.12■■□□□ 1.77
SBDS-205ENST00000617799 DUOX2Q9NRD8 1548 aa26.12■■□□□ 1.77
SBDS-205ENST00000617799 RIMS1Q86UR5 1692 aaKnown RBP26.11■■□□□ 1.77
SBDS-205ENST00000617799 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
SBDS-205ENST00000617799 PTPRKQ15262 1439 aa26.08■■□□□ 1.77
SBDS-205ENST00000617799 KIF3BO15066 747 aa26.08■■□□□ 1.77
SBDS-205ENST00000617799 ESF1Q9H501 851 aaKnown RBP26.08■■□□□ 1.77
SBDS-205ENST00000617799 NCOA1Q15788 1441 aa26.07■■□□□ 1.76
SBDS-205ENST00000617799 GGT6Q6P531 493 aa26.06■■□□□ 1.76
SBDS-205ENST00000617799 EIF2AK4Q9P2K8 1649 aaKnown RBP26.06■■□□□ 1.76
SBDS-205ENST00000617799 ERBINQ96RT1 1412 aa26.03■■□□□ 1.76
SBDS-205ENST00000617799 PTPRMP28827 1452 aa26.02■■□□□ 1.76
SBDS-205ENST00000617799 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms