RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
SEM1-217ENST00000617133 MFSD10Q14728 455 aa11.07□□□□□ -0.64
SEM1-217ENST00000617133 KCNV2Q8TDN2 545 aa11.06□□□□□ -0.64
SEM1-217ENST00000617133 G3V3G9 751 aa11.05□□□□□ -0.64
SEM1-217ENST00000617133 NBR1Q14596 966 aa11.05□□□□□ -0.64
SEM1-217ENST00000617133 L3MBTL3Q96JM7 780 aaPredicted RBP11.05□□□□□ -0.64
SEM1-217ENST00000617133 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
SEM1-217ENST00000617133 E2F4Q16254 413 aa11.02□□□□□ -0.65
SEM1-217ENST00000617133 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
SEM1-217ENST00000617133 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
SEM1-217ENST00000617133 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
SEM1-217ENST00000617133 C2orf72A6NCS6 295 aa10.96□□□□□ -0.65
SEM1-217ENST00000617133 KIF3CO14782 793 aa10.96□□□□□ -0.65
SEM1-217ENST00000617133 DSG2Q14126 1118 aa10.96□□□□□ -0.65
SEM1-217ENST00000617133 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
SEM1-217ENST00000617133 CAMK2BQ13554 666 aa10.95□□□□□ -0.66
SEM1-217ENST00000617133 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
SEM1-217ENST00000617133 FOXK1P85037 733 aa10.94□□□□□ -0.66
SEM1-217ENST00000617133 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
SEM1-217ENST00000617133 PLPP6Q8IY26 295 aa10.9□□□□□ -0.66
SEM1-217ENST00000617133 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
SEM1-217ENST00000617133 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
SEM1-217ENST00000617133 POTEB2H3BUK9 544 aa10.83□□□□□ -0.68
SEM1-217ENST00000617133 SEMA3EO15041 775 aa10.83□□□□□ -0.68
SEM1-217ENST00000617133 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
SEM1-217ENST00000617133 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.83□□□□□ -0.68
SEM1-217ENST00000617133 DPYSL4O14531 572 aa10.82□□□□□ -0.68
SEM1-217ENST00000617133 PRKCSHP14314 528 aaPredicted RBP10.81□□□□□ -0.68
SEM1-217ENST00000617133 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
SEM1-217ENST00000617133 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
SEM1-217ENST00000617133 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
SEM1-217ENST00000617133 PDIA6Q15084 440 aa10.76□□□□□ -0.69
SEM1-217ENST00000617133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
SEM1-217ENST00000617133 OXER1Q8TDS5 423 aa10.75□□□□□ -0.69
SEM1-217ENST00000617133 SPDYE16A6NNV3 312 aaPredicted RBP10.74□□□□□ -0.69
SEM1-217ENST00000617133 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
SEM1-217ENST00000617133 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
SEM1-217ENST00000617133 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
SEM1-217ENST00000617133 SLC34A2O95436 690 aa10.71□□□□□ -0.69
SEM1-217ENST00000617133 MLLT3P42568 568 aaPredicted RBP10.71□□□□□ -0.69
SEM1-217ENST00000617133 PTCD2Q8WV60 388 aaKnown RBP10.71□□□□□ -0.69
SEM1-217ENST00000617133 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
SEM1-217ENST00000617133 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
SEM1-217ENST00000617133 SMYD5Q6GMV2 418 aa10.69□□□□□ -0.7
SEM1-217ENST00000617133 SLAIN1Q8ND83 568 aa10.69□□□□□ -0.7
SEM1-217ENST00000617133 TBC1D12O60347 775 aa10.66□□□□□ -0.7
SEM1-217ENST00000617133 EVI5O60447 810 aa10.65□□□□□ -0.7
SEM1-217ENST00000617133 PCDHGA4Q9Y5G9 962 aa10.63□□□□□ -0.71
SEM1-217ENST00000617133 HOXB3P14651 431 aaPredicted RBP10.62□□□□□ -0.71
SEM1-217ENST00000617133 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
SEM1-217ENST00000617133 PTGER2P43116 358 aa10.61□□□□□ -0.71
SEM1-217ENST00000617133 RBM26Q5T8P6 1007 aaKnown RBP10.61□□□□□ -0.71
SEM1-217ENST00000617133 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
SEM1-217ENST00000617133 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
SEM1-217ENST00000617133 ZC3H15Q8WU90 426 aaKnown RBP10.59□□□□□ -0.71
SEM1-217ENST00000617133 DDX12PQ92771 950 aa10.59□□□□□ -0.71
SEM1-217ENST00000617133 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
SEM1-217ENST00000617133 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
SEM1-217ENST00000617133 LHX8Q68G74 356 aa10.56□□□□□ -0.72
SEM1-217ENST00000617133 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
SEM1-217ENST00000617133 OSBPP22059 807 aa10.55□□□□□ -0.72
SEM1-217ENST00000617133 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
SEM1-217ENST00000617133 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.721e-7■□□□□ 8
SEM1-217ENST00000617133 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
SEM1-217ENST00000617133 ARSIQ5FYB1 569 aa10.54□□□□□ -0.72
SEM1-217ENST00000617133 ZSWIM6Q9HCJ5 1215 aa10.54□□□□□ -0.72
SEM1-217ENST00000617133 GPR153Q6NV75 609 aa10.53□□□□□ -0.72
SEM1-217ENST00000617133 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
SEM1-217ENST00000617133 NUDT7P0C024 238 aa10.52□□□□□ -0.73
SEM1-217ENST00000617133 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
SEM1-217ENST00000617133 SNPHO15079 494 aa10.51□□□□□ -0.73
SEM1-217ENST00000617133 PHF14O94880 888 aa10.5□□□□□ -0.73
SEM1-217ENST00000617133 ZMYND10O75800 440 aa10.49□□□□□ -0.73
SEM1-217ENST00000617133 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
SEM1-217ENST00000617133 GPR37O15354 613 aa10.48□□□□□ -0.73
SEM1-217ENST00000617133 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
SEM1-217ENST00000617133 EPAS1Q99814 870 aa10.48□□□□□ -0.73
SEM1-217ENST00000617133 PCDHGA10Q9Y5H3 936 aa10.48□□□□□ -0.73
SEM1-217ENST00000617133 FOSBP53539 338 aa10.45□□□□□ -0.74
SEM1-217ENST00000617133 EN1Q05925 392 aaPredicted RBP10.45□□□□□ -0.74
SEM1-217ENST00000617133 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
SEM1-217ENST00000617133 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
SEM1-217ENST00000617133 ZNF454Q8N9F8 522 aa10.44□□□□□ -0.74
SEM1-217ENST00000617133 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
SEM1-217ENST00000617133 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
SEM1-217ENST00000617133 FBXW7Q969H0 707 aa10.43□□□□□ -0.74
SEM1-217ENST00000617133 SLC24A3Q9HC58 644 aa10.43□□□□□ -0.74
SEM1-217ENST00000617133 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
SEM1-217ENST00000617133 MAP3K7O43318 606 aa10.42□□□□□ -0.74
SEM1-217ENST00000617133 CDHR5Q9HBB8 845 aa10.42□□□□□ -0.74
SEM1-217ENST00000617133 FCHSD2O94868 740 aa10.4□□□□□ -0.74
SEM1-217ENST00000617133 TSR1Q2NL82 804 aaKnown RBP10.4□□□□□ -0.74
SEM1-217ENST00000617133 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
SEM1-217ENST00000617133 PTGDRQ13258 359 aa10.39□□□□□ -0.75
SEM1-217ENST00000617133 HIC1Q14526 733 aa10.38□□□□□ -0.75
SEM1-217ENST00000617133 KRI1Q8N9T8 703 aaKnown RBP10.38□□□□□ -0.75
SEM1-217ENST00000617133 GNPATO15228 680 aa10.37□□□□□ -0.75
SEM1-217ENST00000617133 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
SEM1-217ENST00000617133 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
SEM1-217ENST00000617133 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms