RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
PVT1-225ENST00000617087 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
PVT1-225ENST00000617087 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
PVT1-225ENST00000617087 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
PVT1-225ENST00000617087 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
PVT1-225ENST00000617087 DSG2Q14126 1118 aa11.28□□□□□ -0.6
PVT1-225ENST00000617087 RBM26Q5T8P6 1007 aaKnown RBP11.28□□□□□ -0.6
PVT1-225ENST00000617087 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
PVT1-225ENST00000617087 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
PVT1-225ENST00000617087 DPYSL4O14531 572 aa11.26□□□□□ -0.61
PVT1-225ENST00000617087 FOXK1P85037 733 aa11.26□□□□□ -0.61
PVT1-225ENST00000617087 CLCN6P51797 869 aa11.25□□□□□ -0.61
PVT1-225ENST00000617087 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
PVT1-225ENST00000617087 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
PVT1-225ENST00000617087 PDIA6Q15084 440 aa11.24□□□□□ -0.61
PVT1-225ENST00000617087 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
PVT1-225ENST00000617087 AK7Q96M32 723 aa11.23□□□□□ -0.61
PVT1-225ENST00000617087 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
PVT1-225ENST00000617087 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
PVT1-225ENST00000617087 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
PVT1-225ENST00000617087 KIF3CO14782 793 aa11.19□□□□□ -0.62
PVT1-225ENST00000617087 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
PVT1-225ENST00000617087 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
PVT1-225ENST00000617087 IER5LQ5T953 404 aa11.18□□□□□ -0.62
PVT1-225ENST00000617087 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
PVT1-225ENST00000617087 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
PVT1-225ENST00000617087 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
PVT1-225ENST00000617087 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
PVT1-225ENST00000617087 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
PVT1-225ENST00000617087 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
PVT1-225ENST00000617087 EVX2Q03828 476 aa11.15□□□□□ -0.62
PVT1-225ENST00000617087 HAX1O00165 279 aa11.14□□□□□ -0.63
PVT1-225ENST00000617087 GPR37O15354 613 aa11.13□□□□□ -0.63
PVT1-225ENST00000617087 TRIM66O15016 1216 aa11.12□□□□□ -0.63
PVT1-225ENST00000617087 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
PVT1-225ENST00000617087 G3V3G9 751 aa11.1□□□□□ -0.63
PVT1-225ENST00000617087 MAP3K9P80192 1104 aa11.1□□□□□ -0.63
PVT1-225ENST00000617087 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
PVT1-225ENST00000617087 PDE4DQ08499 809 aa11.08□□□□□ -0.64
PVT1-225ENST00000617087 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
PVT1-225ENST00000617087 KDM4CQ9H3R0 1056 aa11.07□□□□□ -0.64
PVT1-225ENST00000617087 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
PVT1-225ENST00000617087 PLCG2P16885 1265 aa11.06□□□□□ -0.64
PVT1-225ENST00000617087 TMEM92Q6UXU6 159 aa11.06□□□□□ -0.64
PVT1-225ENST00000617087 PTGER2P43116 358 aa11.05□□□□□ -0.64
PVT1-225ENST00000617087 OXER1Q8TDS5 423 aa11.05□□□□□ -0.64
PVT1-225ENST00000617087 OSBPP22059 807 aa11.04□□□□□ -0.64
PVT1-225ENST00000617087 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
PVT1-225ENST00000617087 IL27Q8NEV9 243 aa11.03□□□□□ -0.64
PVT1-225ENST00000617087 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
PVT1-225ENST00000617087 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
PVT1-225ENST00000617087 ARXQ96QS3 562 aa11.02□□□□□ -0.65
PVT1-225ENST00000617087 MAP2K5Q13163 448 aa11□□□□□ -0.65
PVT1-225ENST00000617087 IRF6O14896 467 aa10.98□□□□□ -0.65
PVT1-225ENST00000617087 GNPATO15228 680 aa10.98□□□□□ -0.65
PVT1-225ENST00000617087 TBC1D12O60347 775 aa10.98□□□□□ -0.65
PVT1-225ENST00000617087 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
PVT1-225ENST00000617087 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
PVT1-225ENST00000617087 GABBR2O75899 941 aa10.97□□□□□ -0.65
PVT1-225ENST00000617087 HIC1Q14526 733 aa10.97□□□□□ -0.65
PVT1-225ENST00000617087 CCDC102AQ96A19 550 aa10.97□□□□□ -0.65
PVT1-225ENST00000617087 FCHSD2O94868 740 aa10.96□□□□□ -0.65
PVT1-225ENST00000617087 DDX12PQ92771 950 aa10.96□□□□□ -0.65
PVT1-225ENST00000617087 EVI5O60447 810 aa10.95□□□□□ -0.66
PVT1-225ENST00000617087 SEC24BO95487 1268 aa10.95□□□□□ -0.66
PVT1-225ENST00000617087 AMHR2Q16671 573 aa10.95□□□□□ -0.66
PVT1-225ENST00000617087 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
PVT1-225ENST00000617087 FECHP22830 423 aa10.93□□□□□ -0.66
PVT1-225ENST00000617087 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
PVT1-225ENST00000617087 FAM117AQ9C073 453 aa10.93□□□□□ -0.66
PVT1-225ENST00000617087 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
PVT1-225ENST00000617087 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
PVT1-225ENST00000617087 SLC39A7Q92504 469 aa10.91□□□□□ -0.66
PVT1-225ENST00000617087 PTGDRQ13258 359 aa10.9□□□□□ -0.66
PVT1-225ENST00000617087 PARP9Q8IXQ6 854 aa10.9□□□□□ -0.66
PVT1-225ENST00000617087 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
PVT1-225ENST00000617087 PLEKHG3A1L390 1219 aa10.89□□□□□ -0.67
PVT1-225ENST00000617087 SLC34A2O95436 690 aa10.89□□□□□ -0.67
PVT1-225ENST00000617087 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
PVT1-225ENST00000617087 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
PVT1-225ENST00000617087 C7P10643 843 aa10.88□□□□□ -0.67
PVT1-225ENST00000617087 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
PVT1-225ENST00000617087 PHF14O94880 888 aa10.83□□□□□ -0.68
PVT1-225ENST00000617087 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
PVT1-225ENST00000617087 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
PVT1-225ENST00000617087 EPAS1Q99814 870 aa10.83□□□□□ -0.68
PVT1-225ENST00000617087 EN1Q05925 392 aaPredicted RBP10.82□□□□□ -0.68
PVT1-225ENST00000617087 ZMYND15Q9H091 742 aa10.82□□□□□ -0.68
PVT1-225ENST00000617087 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
PVT1-225ENST00000617087 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
PVT1-225ENST00000617087 TTLL12Q14166 644 aaPredicted RBP10.8□□□□□ -0.68
PVT1-225ENST00000617087 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
PVT1-225ENST00000617087 CDHR5Q9HBB8 845 aa10.79□□□□□ -0.68
PVT1-225ENST00000617087 GIGYF2Q6Y7W6 1299 aaKnown RBP10.77□□□□□ -0.69
PVT1-225ENST00000617087 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
PVT1-225ENST00000617087 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
PVT1-225ENST00000617087 PCDHGA10Q9Y5H3 936 aa10.77□□□□□ -0.69
PVT1-225ENST00000617087 POTEIP0CG38 1075 aa10.76□□□□□ -0.69
PVT1-225ENST00000617087 MS4A1P11836 297 aa10.76□□□□□ -0.69
PVT1-225ENST00000617087 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms