RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
MMP28-205ENST00000615317 FAM69CQ0P6D2 419 aa14.13□□□□□ -0.15
MMP28-205ENST00000615317 ABCC1P33527 1531 aa14.13□□□□□ -0.15
MMP28-205ENST00000615317 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
MMP28-205ENST00000615317 CROCC2H7BZ55 1655 aa14.13□□□□□ -0.15
MMP28-205ENST00000615317 CAMSAP2Q08AD1 1489 aa14.12□□□□□ -0.15
MMP28-205ENST00000615317 FGD6Q6ZV73 1430 aa14.12□□□□□ -0.15
MMP28-205ENST00000615317 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
MMP28-205ENST00000615317 FANCAO15360 1455 aa14.11□□□□□ -0.15
MMP28-205ENST00000615317 PLCH2O75038 1416 aa14.1□□□□□ -0.15
MMP28-205ENST00000615317 TEX14Q8IWB6 1497 aa14.1□□□□□ -0.15
MMP28-205ENST00000615317 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
MMP28-205ENST00000615317 TCOF1Q13428 1488 aaKnown RBP14.07□□□□□ -0.16
MMP28-205ENST00000615317 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
MMP28-205ENST00000615317 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
MMP28-205ENST00000615317 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
MMP28-205ENST00000615317 ADGRL1O94910 1474 aa14.06□□□□□ -0.16
MMP28-205ENST00000615317 NEO1Q92859 1461 aa14.06□□□□□ -0.16
MMP28-205ENST00000615317 FRMPD1Q5SYB0 1578 aa14.06□□□□□ -0.16
MMP28-205ENST00000615317 RRBP1Q9P2E9 1410 aaKnown RBP14.06□□□□□ -0.16
MMP28-205ENST00000615317 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
MMP28-205ENST00000615317 ARHGEF5Q12774 1597 aa14.04□□□□□ -0.16
MMP28-205ENST00000615317 KDM6BO15054 1643 aa14.04□□□□□ -0.16
MMP28-205ENST00000615317 CFDP1Q9UEE9 299 aaPredicted RBP14.03□□□□□ -0.16
MMP28-205ENST00000615317 ARHGEF12Q9NZN5 1544 aa14.02□□□□□ -0.16
MMP28-205ENST00000615317 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.16
MMP28-205ENST00000615317 AKNAQ7Z591 1439 aa14.02□□□□□ -0.16
MMP28-205ENST00000615317 ZNF777Q9ULD5 760 aaPredicted RBP14.02□□□□□ -0.17
MMP28-205ENST00000615317 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
MMP28-205ENST00000615317 CCDC141Q6ZP82 1450 aa14□□□□□ -0.17
MMP28-205ENST00000615317 POGZQ7Z3K3 1410 aa14□□□□□ -0.17
MMP28-205ENST00000615317 ZNF644Q9H582 1327 aaPredicted RBP14□□□□□ -0.17
MMP28-205ENST00000615317 KDM5CP41229 1560 aa14□□□□□ -0.17
MMP28-205ENST00000615317 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
MMP28-205ENST00000615317 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
MMP28-205ENST00000615317 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
MMP28-205ENST00000615317 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
MMP28-205ENST00000615317 MAST1Q9Y2H9 1570 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 ZMYM4Q5VZL5 1548 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
MMP28-205ENST00000615317 MBD5Q9P267 1494 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 SHANK2Q9UPX8 1470 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 DAPK1P53355 1430 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
MMP28-205ENST00000615317 DENND4BO75064 1496 aaPredicted RBP13.96□□□□□ -0.17
MMP28-205ENST00000615317 ZNF518AQ6AHZ1 1483 aa13.96□□□□□ -0.17
MMP28-205ENST00000615317 ABCA6Q8N139 1617 aa13.96□□□□□ -0.17
MMP28-205ENST00000615317 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.18
MMP28-205ENST00000615317 ATP7AQ04656 1500 aa13.95□□□□□ -0.18
MMP28-205ENST00000615317 GCC2Q8IWJ2 1684 aa13.95□□□□□ -0.18
MMP28-205ENST00000615317 KIDINS220Q9ULH0 1771 aa13.95□□□□□ -0.18
MMP28-205ENST00000615317 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
MMP28-205ENST00000615317 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
MMP28-205ENST00000615317 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
MMP28-205ENST00000615317 ABCC5O15440 1437 aa13.93□□□□□ -0.18
MMP28-205ENST00000615317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.93□□□□□ -0.18
MMP28-205ENST00000615317 C9orf84Q5VXU9 1444 aa13.92□□□□□ -0.18
MMP28-205ENST00000615317 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
MMP28-205ENST00000615317 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
MMP28-205ENST00000615317 PTPRKQ15262 1439 aa13.9□□□□□ -0.19
MMP28-205ENST00000615317 ADGRL2O95490 1459 aa13.88□□□□□ -0.19
MMP28-205ENST00000615317 ITGAEP38570 1179 aa13.88□□□□□ -0.19
MMP28-205ENST00000615317 SIGLEC1Q9BZZ2 1709 aa13.87□□□□□ -0.19
MMP28-205ENST00000615317 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
MMP28-205ENST00000615317 MLH3Q9UHC1 1453 aa13.86□□□□□ -0.19
MMP28-205ENST00000615317 YEATS2Q9ULM3 1422 aa13.85□□□□□ -0.19
MMP28-205ENST00000615317 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
MMP28-205ENST00000615317 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
MMP28-205ENST00000615317 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
MMP28-205ENST00000615317 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
MMP28-205ENST00000615317 MAGI2Q86UL8 1455 aa13.82□□□□□ -0.2
MMP28-205ENST00000615317 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
MMP28-205ENST00000615317 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
MMP28-205ENST00000615317 DUOX2Q9NRD8 1548 aa13.81□□□□□ -0.2
MMP28-205ENST00000615317 CHIC2Q9UKJ5 165 aa13.81□□□□□ -0.2
MMP28-205ENST00000615317 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
MMP28-205ENST00000615317 BCORL1Q5H9F3 1711 aa13.81□□□□□ -0.2
MMP28-205ENST00000615317 MYT1LQ9UL68 1186 aa13.8□□□□□ -0.2
MMP28-205ENST00000615317 ROCK1Q13464 1354 aa13.8□□□□□ -0.2
MMP28-205ENST00000615317 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
MMP28-205ENST00000615317 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
MMP28-205ENST00000615317 HFM1A2PYH4 1435 aa13.79□□□□□ -0.2
MMP28-205ENST00000615317 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 A2MP01023 1474 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 UNC13BO14795 1591 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
MMP28-205ENST00000615317 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
MMP28-205ENST00000615317 NAIPQ13075 1403 aa13.77□□□□□ -0.21
MMP28-205ENST00000615317 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
MMP28-205ENST00000615317 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
MMP28-205ENST00000615317 RRP7BPQ9NSQ0 103 aa13.76□□□□□ -0.21
MMP28-205ENST00000615317 CEP152O94986 1710 aa13.76□□□□□ -0.21
MMP28-205ENST00000615317 ATP10AO60312 1499 aa13.75□□□□□ -0.21
MMP28-205ENST00000615317 PRDM15P57071 1507 aaPredicted RBP13.74□□□□□ -0.21
MMP28-205ENST00000615317 ANKRD50Q9ULJ7 1429 aa13.73□□□□□ -0.21
MMP28-205ENST00000615317 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
MMP28-205ENST00000615317 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
MMP28-205ENST00000615317 AGLP35573 1532 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms