RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
TNFRSF9-204ENST00000615230 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
TNFRSF9-204ENST00000615230 BCL11AQ9H165 835 aa12.76□□□□□ -0.37
TNFRSF9-204ENST00000615230 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 PRG4Q92954 1404 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 PPM1GO15355 546 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF9-204ENST00000615230 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
TNFRSF9-204ENST00000615230 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
TNFRSF9-204ENST00000615230 IGF1RP08069 1367 aa12.74□□□□□ -0.37
TNFRSF9-204ENST00000615230 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
TNFRSF9-204ENST00000615230 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
TNFRSF9-204ENST00000615230 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF9-204ENST00000615230 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF9-204ENST00000615230 MYOM3Q5VTT5 1437 aa12.73□□□□□ -0.37
TNFRSF9-204ENST00000615230 FOXD1Q16676 465 aa12.72□□□□□ -0.37
TNFRSF9-204ENST00000615230 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
TNFRSF9-204ENST00000615230 ARXQ96QS3 562 aa12.72□□□□□ -0.37
TNFRSF9-204ENST00000615230 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
TNFRSF9-204ENST00000615230 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
TNFRSF9-204ENST00000615230 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
TNFRSF9-204ENST00000615230 RTF1Q92541 710 aaKnown RBP12.71□□□□□ -0.37
TNFRSF9-204ENST00000615230 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
TNFRSF9-204ENST00000615230 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF9-204ENST00000615230 KIF21BO75037 1637 aa12.71□□□□□ -0.38
TNFRSF9-204ENST00000615230 TOP2BQ02880 1626 aa12.71□□□□□ -0.38
TNFRSF9-204ENST00000615230 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.38
TNFRSF9-204ENST00000615230 CUL7Q14999 1698 aa12.7□□□□□ -0.38
TNFRSF9-204ENST00000615230 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
TNFRSF9-204ENST00000615230 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
TNFRSF9-204ENST00000615230 ARHGAP5Q13017 1502 aa12.7□□□□□ -0.38
TNFRSF9-204ENST00000615230 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF9-204ENST00000615230 NESP48681 1621 aa12.68□□□□□ -0.38
TNFRSF9-204ENST00000615230 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
TNFRSF9-204ENST00000615230 MPHOSPH9Q99550 1183 aa12.68□□□□□ -0.38
TNFRSF9-204ENST00000615230 FYCO1Q9BQS8 1478 aa12.68□□□□□ -0.38
TNFRSF9-204ENST00000615230 CCDC9Q9Y3X0 531 aaKnown RBP12.67□□□□□ -0.38
TNFRSF9-204ENST00000615230 STK26Q9P289 416 aa12.66□□□□□ -0.38
TNFRSF9-204ENST00000615230 CASKIN1Q8WXD9 1431 aa12.66□□□□□ -0.38
TNFRSF9-204ENST00000615230 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
TNFRSF9-204ENST00000615230 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
TNFRSF9-204ENST00000615230 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF9-204ENST00000615230 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
TNFRSF9-204ENST00000615230 GOLGA2Q08379 1002 aa12.65□□□□□ -0.39
TNFRSF9-204ENST00000615230 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
TNFRSF9-204ENST00000615230 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
TNFRSF9-204ENST00000615230 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
TNFRSF9-204ENST00000615230 ANP32BQ92688 251 aaKnown RBP12.63□□□□□ -0.39
TNFRSF9-204ENST00000615230 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
TNFRSF9-204ENST00000615230 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
TNFRSF9-204ENST00000615230 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
TNFRSF9-204ENST00000615230 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
TNFRSF9-204ENST00000615230 KIAA0586Q9BVV6 1533 aa12.62□□□□□ -0.39
TNFRSF9-204ENST00000615230 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
TNFRSF9-204ENST00000615230 LMOD3Q0VAK6 560 aa12.61□□□□□ -0.39
TNFRSF9-204ENST00000615230 SALL2Q9Y467 1007 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF9-204ENST00000615230 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
TNFRSF9-204ENST00000615230 ATF3P18847 181 aa12.58□□□□□ -0.4
TNFRSF9-204ENST00000615230 RALBP1Q15311 655 aa12.58□□□□□ -0.4
TNFRSF9-204ENST00000615230 EVC2Q86UK5 1308 aa12.58□□□□□ -0.4
TNFRSF9-204ENST00000615230 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
TNFRSF9-204ENST00000615230 CDK11BP21127 795 aaKnown RBP12.58□□□□□ -0.4
TNFRSF9-204ENST00000615230 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 DCAF8L1A6NGE4 600 aa12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
TNFRSF9-204ENST00000615230 EVA1CP58658 441 aa12.55□□□□□ -0.4
TNFRSF9-204ENST00000615230 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
TNFRSF9-204ENST00000615230 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
TNFRSF9-204ENST00000615230 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
TNFRSF9-204ENST00000615230 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF9-204ENST00000615230 AMPHP49418 695 aa12.54□□□□□ -0.4
TNFRSF9-204ENST00000615230 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
TNFRSF9-204ENST00000615230 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
TNFRSF9-204ENST00000615230 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TNFRSF9-204ENST00000615230 PSME1Q06323 249 aa12.53□□□□□ -0.4
TNFRSF9-204ENST00000615230 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
TNFRSF9-204ENST00000615230 KIF15Q9NS87 1388 aa12.53□□□□□ -0.4
TNFRSF9-204ENST00000615230 MIA2Q96PC5 1412 aa12.52□□□□□ -0.41
TNFRSF9-204ENST00000615230 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
TNFRSF9-204ENST00000615230 TNNT2P45379 298 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF9-204ENST00000615230 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
TNFRSF9-204ENST00000615230 GRIN2AQ12879 1464 aa12.51□□□□□ -0.41
TNFRSF9-204ENST00000615230 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF9-204ENST00000615230 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
TNFRSF9-204ENST00000615230 COG3Q96JB2 828 aa12.5□□□□□ -0.41
TNFRSF9-204ENST00000615230 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
TNFRSF9-204ENST00000615230 BECN1Q14457 450 aa12.5□□□□□ -0.41
TNFRSF9-204ENST00000615230 SOX12O15370 315 aa12.49□□□□□ -0.41
TNFRSF9-204ENST00000615230 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
TNFRSF9-204ENST00000615230 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
TNFRSF9-204ENST00000615230 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
TNFRSF9-204ENST00000615230 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
TNFRSF9-204ENST00000615230 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
TNFRSF9-204ENST00000615230 KIF14Q15058 1648 aa12.48□□□□□ -0.41
TNFRSF9-204ENST00000615230 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms