RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 POGZQ7Z3K3 1410 aa31.56■■■□□ 2.64
SNX21-213ENST00000614929 SCAPERQ9BY12 1400 aa31.56■■■□□ 2.64
SNX21-213ENST00000614929 ZFYVE16Q7Z3T8 1539 aa31.55■■■□□ 2.64
SNX21-213ENST00000614929 PTPRMP28827 1452 aa31.53■■■□□ 2.64
SNX21-213ENST00000614929 EFCAB2Q5VUJ9 269 aa31.53■■■□□ 2.64
SNX21-213ENST00000614929 FYCO1Q9BQS8 1478 aa31.52■■■□□ 2.64
SNX21-213ENST00000614929 MADDQ8WXG6 1647 aa31.52■■■□□ 2.64
SNX21-213ENST00000614929 YEATS2Q9ULM3 1422 aa31.5■■■□□ 2.63
SNX21-213ENST00000614929 CDC42BPBQ9Y5S2 1711 aa31.5■■■□□ 2.63
SNX21-213ENST00000614929 SIGLEC1Q9BZZ2 1709 aa31.49■■■□□ 2.63
SNX21-213ENST00000614929 ARID4BQ4LE39 1312 aaPredicted RBP31.49■■■□□ 2.63
SNX21-213ENST00000614929 ARHGAP5Q13017 1502 aa31.47■■■□□ 2.63
SNX21-213ENST00000614929 PREX2Q70Z35 1606 aa31.46■■■□□ 2.63
SNX21-213ENST00000614929 KDM5CP41229 1560 aa31.42■■■□□ 2.62
SNX21-213ENST00000614929 ZNF518AQ6AHZ1 1483 aa31.41■■■□□ 2.62
SNX21-213ENST00000614929 RIMS1Q86UR5 1692 aaKnown RBP31.41■■■□□ 2.62
SNX21-213ENST00000614929 CDC42BPAQ5VT25 1732 aa31.39■■■□□ 2.62
SNX21-213ENST00000614929 ATP10AO60312 1499 aa31.37■■■□□ 2.61
SNX21-213ENST00000614929 ABCC1P33527 1531 aa31.34■■■□□ 2.61
SNX21-213ENST00000614929 C9orf84Q5VXU9 1444 aa31.33■■■□□ 2.61
SNX21-213ENST00000614929 ITSN2Q9NZM3 1697 aa31.32■■■□□ 2.6
SNX21-213ENST00000614929 FER1L4A9Z1Z3 1794 aa31.31■■■□□ 2.6
SNX21-213ENST00000614929 AFAP1Q8N556 730 aa31.29■■■□□ 2.6
SNX21-213ENST00000614929 ARHGEF12Q9NZN5 1544 aa31.28■■■□□ 2.6
SNX21-213ENST00000614929 MLH3Q9UHC1 1453 aa31.27■■■□□ 2.6
SNX21-213ENST00000614929 REREQ9P2R6 1566 aa31.26■■■□□ 2.6
SNX21-213ENST00000614929 DIP2CQ9Y2E4 1556 aa31.26■■■□□ 2.6
SNX21-213ENST00000614929 LMTK3Q96Q04 1460 aa31.23■■■□□ 2.59
SNX21-213ENST00000614929 ABCA6Q8N139 1617 aa31.23■■■□□ 2.59
SNX21-213ENST00000614929 TRAPPC8Q9Y2L5 1435 aa31.23■■■□□ 2.59
SNX21-213ENST00000614929 GPATCH8Q9UKJ3 1502 aaKnown RBP31.22■■■□□ 2.59
SNX21-213ENST00000614929 CEP162Q5TB80 1403 aa31.2■■■□□ 2.59
SNX21-213ENST00000614929 SAMD9LQ8IVG5 1584 aa31.2■■■□□ 2.58
SNX21-213ENST00000614929 KIDINS220Q9ULH0 1771 aa31.18■■■□□ 2.58
SNX21-213ENST00000614929 MLECQ14165 292 aa31.18■■■□□ 2.58
SNX21-213ENST00000614929 AGLP35573 1532 aa31.14■■■□□ 2.57
SNX21-213ENST00000614929 MTUS2Q5JR59 1369 aa31.13■■■□□ 2.57
SNX21-213ENST00000614929 EHBP1L1Q8N3D4 1523 aa31.11■■■□□ 2.57
SNX21-213ENST00000614929 SYCP2Q9BX26 1530 aa31.11■■■□□ 2.57
SNX21-213ENST00000614929 MYT1LQ9UL68 1186 aa31.11■■■□□ 2.57
SNX21-213ENST00000614929 PLEKHH2Q8IVE3 1493 aa31.08■■■□□ 2.57
SNX21-213ENST00000614929 KIAA1107Q9UPP5 1409 aa31.08■■■□□ 2.57
SNX21-213ENST00000614929 CCNB3Q8WWL7 1395 aa31.07■■■□□ 2.56
SNX21-213ENST00000614929 ILDR1Q86SU0 546 aaPredicted RBP31.06■■■□□ 2.56
SNX21-213ENST00000614929 ZNF777Q9ULD5 760 aaPredicted RBP31.06■■■□□ 2.56
SNX21-213ENST00000614929 TIAM1Q13009 1591 aa31.05■■■□□ 2.56
SNX21-213ENST00000614929 CFDP1Q9UEE9 299 aaPredicted RBP31.04■■■□□ 2.56
SNX21-213ENST00000614929 PREX1Q8TCU6 1659 aa31.03■■■□□ 2.56
SNX21-213ENST00000614929 SETD1BQ9UPS6 1966 aaKnown RBP31.01■■■□□ 2.56
SNX21-213ENST00000614929 PLPPR3Q6T4P5 718 aa31.01■■■□□ 2.55
SNX21-213ENST00000614929 INO80Q9ULG1 1556 aaPredicted RBP31■■■□□ 2.55
SNX21-213ENST00000614929 HNRNPMP52272 730 aaKnown RBP eCLIP30.99■■■□□ 2.55
SNX21-213ENST00000614929 ATP7AQ04656 1500 aa30.98■■■□□ 2.55
SNX21-213ENST00000614929 SPAG9O60271 1321 aaKnown RBP30.98■■■□□ 2.55
SNX21-213ENST00000614929 C3P01024 1663 aa30.97■■■□□ 2.55
SNX21-213ENST00000614929 HSPA2P54652 639 aa30.94■■■□□ 2.54
SNX21-213ENST00000614929 SUPT6HQ7KZ85 1726 aaKnown RBP30.94■■■□□ 2.54
SNX21-213ENST00000614929 PLXNC1O60486 1568 aa30.93■■■□□ 2.54
SNX21-213ENST00000614929 CEBPAP49715 358 aaPredicted RBP30.93■■■□□ 2.54
SNX21-213ENST00000614929 MBD5Q9P267 1494 aa30.9■■■□□ 2.54
SNX21-213ENST00000614929 VPS8Q8N3P4 1428 aa30.9■■■□□ 2.54
SNX21-213ENST00000614929 CNTLNQ9NXG0 1405 aa30.9■■■□□ 2.54
SNX21-213ENST00000614929 LOC105371045A0A1W2PR82 267 aa30.89■■■□□ 2.54
SNX21-213ENST00000614929 NCOA2Q15596 1464 aa30.89■■■□□ 2.53
SNX21-213ENST00000614929 MROH2AA6NES4 1674 aa30.88■■■□□ 2.53
SNX21-213ENST00000614929 ADGBQ8N7X0 1667 aa30.87■■■□□ 2.53
SNX21-213ENST00000614929 ZNF644Q9H582 1327 aaPredicted RBP30.87■■■□□ 2.53
SNX21-213ENST00000614929 A2MP01023 1474 aa30.86■■■□□ 2.53
SNX21-213ENST00000614929 UHRF1BP1Q6BDS2 1440 aa30.83■■■□□ 2.53
SNX21-213ENST00000614929 ESF1Q9H501 851 aaKnown RBP30.83■■■□□ 2.53
SNX21-213ENST00000614929 RTEL1-TNFRSF6BF6WH68 1400 aa30.81■■■□□ 2.52
SNX21-213ENST00000614929 MAP3K1Q13233 1512 aa30.79■■■□□ 2.52
SNX21-213ENST00000614929 LRRC9Q6ZRR7 1453 aa30.78■■■□□ 2.52
SNX21-213ENST00000614929 STRCQ7RTU9 1775 aa30.78■■■□□ 2.52
SNX21-213ENST00000614929 CAMSAP2Q08AD1 1489 aa30.77■■■□□ 2.52
SNX21-213ENST00000614929 CLTCQ00610 1675 aaKnown RBP30.75■■■□□ 2.51
SNX21-213ENST00000614929 CCDC141Q6ZP82 1450 aa30.75■■■□□ 2.51
SNX21-213ENST00000614929 FBXO41Q8TF61 875 aa30.74■■■□□ 2.51
SNX21-213ENST00000614929 NPATQ14207 1427 aa30.73■■■□□ 2.51
SNX21-213ENST00000614929 ARHGEF5Q12774 1597 aa30.72■■■□□ 2.51
SNX21-213ENST00000614929 ZMYM3Q14202 1370 aa30.71■■■□□ 2.51
SNX21-213ENST00000614929 RSPH4AQ5TD94 716 aa30.71■■■□□ 2.51
SNX21-213ENST00000614929 PPP6R1Q9UPN7 881 aa30.68■■■□□ 2.5
SNX21-213ENST00000614929 DHX29Q7Z478 1369 aaKnown RBP30.67■■■□□ 2.5
SNX21-213ENST00000614929 GGT6Q6P531 493 aa30.63■■■□□ 2.49
SNX21-213ENST00000614929 DMRT2Q9Y5R5 561 aa30.63■■■□□ 2.49
SNX21-213ENST00000614929 KANK4Q5T7N3 995 aaPredicted RBP30.61■■■□□ 2.49
SNX21-213ENST00000614929 ZNF142P52746 1687 aaPredicted RBP30.59■■■□□ 2.49
SNX21-213ENST00000614929 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
SNX21-213ENST00000614929 MAST1Q9Y2H9 1570 aa30.58■■■□□ 2.49
SNX21-213ENST00000614929 FAM135AQ9P2D6 1515 aa30.58■■■□□ 2.49
SNX21-213ENST00000614929 MYO3AQ8NEV4 1616 aa30.58■■■□□ 2.49
SNX21-213ENST00000614929 PTPRTO14522 1441 aa30.57■■■□□ 2.48
SNX21-213ENST00000614929 MIA2Q96PC5 1412 aa30.57■■■□□ 2.48
SNX21-213ENST00000614929 NCOA1Q15788 1441 aa30.56■■■□□ 2.48
SNX21-213ENST00000614929 MYOM3Q5VTT5 1437 aa30.56■■■□□ 2.48
SNX21-213ENST00000614929 CERKQ8TCT0 537 aa30.54■■■□□ 2.48
SNX21-213ENST00000614929 TSPY4P0CV99 314 aa30.53■■■□□ 2.48
SNX21-213ENST00000614929 TSPY10P0CW01 314 aa30.53■■■□□ 2.48
SNX21-213ENST00000614929 CAMSAP1Q5T5Y3 1602 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms