RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
CPNE9-205ENST00000613455 ITGAEP38570 1179 aa30.64■■■□□ 2.5
CPNE9-205ENST00000613455 PLCH2O75038 1416 aa30.63■■■□□ 2.49
CPNE9-205ENST00000613455 ARHGAP5Q13017 1502 aa30.61■■■□□ 2.49
CPNE9-205ENST00000613455 SAMD9LQ8IVG5 1584 aa30.61■■■□□ 2.49
CPNE9-205ENST00000613455 ARAP3Q8WWN8 1544 aa30.6■■■□□ 2.49
CPNE9-205ENST00000613455 PTPRKQ15262 1439 aa30.59■■■□□ 2.49
CPNE9-205ENST00000613455 DNMT1P26358 1616 aaKnown RBP30.59■■■□□ 2.49
CPNE9-205ENST00000613455 ZNF777Q9ULD5 760 aaPredicted RBP30.57■■■□□ 2.48
CPNE9-205ENST00000613455 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
CPNE9-205ENST00000613455 DAPK1P53355 1430 aa30.53■■■□□ 2.48
CPNE9-205ENST00000613455 ABCC5O15440 1437 aa30.51■■■□□ 2.48
CPNE9-205ENST00000613455 GLI2P10070 1586 aa30.5■■■□□ 2.47
CPNE9-205ENST00000613455 CROCC2H7BZ55 1655 aa30.5■■■□□ 2.47
CPNE9-205ENST00000613455 DIP2BQ9P265 1576 aa30.5■■■□□ 2.47
CPNE9-205ENST00000613455 MBD5Q9P267 1494 aa30.48■■■□□ 2.47
CPNE9-205ENST00000613455 ARHGEF5Q12774 1597 aa30.47■■■□□ 2.47
CPNE9-205ENST00000613455 SYCP2Q9BX26 1530 aa30.47■■■□□ 2.47
CPNE9-205ENST00000613455 CD109Q6YHK3 1445 aa30.46■■■□□ 2.47
CPNE9-205ENST00000613455 MAP3K4Q9Y6R4 1608 aa30.46■■■□□ 2.47
CPNE9-205ENST00000613455 EFCAB2Q5VUJ9 269 aa30.45■■■□□ 2.47
CPNE9-205ENST00000613455 ABCC1P33527 1531 aa30.45■■■□□ 2.46
CPNE9-205ENST00000613455 FANCAO15360 1455 aa30.44■■■□□ 2.46
CPNE9-205ENST00000613455 PLEKHH2Q8IVE3 1493 aa30.44■■■□□ 2.46
CPNE9-205ENST00000613455 KIAA1107Q9UPP5 1409 aa30.43■■■□□ 2.46
CPNE9-205ENST00000613455 ARHGEF12Q9NZN5 1544 aa30.41■■■□□ 2.46
CPNE9-205ENST00000613455 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
CPNE9-205ENST00000613455 SHANK2Q9UPX8 1470 aa30.39■■■□□ 2.46
CPNE9-205ENST00000613455 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
CPNE9-205ENST00000613455 AKNAQ7Z591 1439 aa30.39■■■□□ 2.46
CPNE9-205ENST00000613455 CCDC141Q6ZP82 1450 aa30.38■■■□□ 2.45
CPNE9-205ENST00000613455 CFAP74Q9C0B2 1584 aa30.37■■■□□ 2.45
CPNE9-205ENST00000613455 ADGBQ8N7X0 1667 aa30.37■■■□□ 2.45
CPNE9-205ENST00000613455 CHIC2Q9UKJ5 165 aa30.36■■■□□ 2.45
CPNE9-205ENST00000613455 SETD5Q9C0A6 1442 aa30.36■■■□□ 2.45
CPNE9-205ENST00000613455 KIF13AQ9H1H9 1805 aa30.36■■■□□ 2.45
CPNE9-205ENST00000613455 ROCK1Q13464 1354 aa30.35■■■□□ 2.45
CPNE9-205ENST00000613455 GCC2Q8IWJ2 1684 aa30.35■■■□□ 2.45
CPNE9-205ENST00000613455 NAIPQ13075 1403 aa30.34■■■□□ 2.45
CPNE9-205ENST00000613455 FAM69CQ0P6D2 419 aa30.33■■■□□ 2.45
CPNE9-205ENST00000613455 ADGRL2O95490 1459 aa30.33■■■□□ 2.45
CPNE9-205ENST00000613455 RAB3GAP2Q9H2M9 1393 aa30.33■■■□□ 2.45
CPNE9-205ENST00000613455 C9orf84Q5VXU9 1444 aa30.32■■■□□ 2.44
CPNE9-205ENST00000613455 RSPH4AQ5TD94 716 aa30.31■■■□□ 2.44
CPNE9-205ENST00000613455 ADGRL1O94910 1474 aa30.3■■■□□ 2.44
CPNE9-205ENST00000613455 MAST1Q9Y2H9 1570 aa30.29■■■□□ 2.44
CPNE9-205ENST00000613455 TRAPPC8Q9Y2L5 1435 aa30.28■■■□□ 2.44
CPNE9-205ENST00000613455 NEO1Q92859 1461 aa30.28■■■□□ 2.44
CPNE9-205ENST00000613455 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
CPNE9-205ENST00000613455 PPRC1Q5VV67 1664 aaKnown RBP30.27■■■□□ 2.44
CPNE9-205ENST00000613455 NCOA1Q15788 1441 aa30.27■■■□□ 2.44
CPNE9-205ENST00000613455 TSPY4P0CV99 314 aa30.24■■■□□ 2.43
CPNE9-205ENST00000613455 TSPY10P0CW01 314 aa30.24■■■□□ 2.43
CPNE9-205ENST00000613455 SCAPERQ9BY12 1400 aa30.24■■■□□ 2.43
CPNE9-205ENST00000613455 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
CPNE9-205ENST00000613455 ANKRD30AQ9BXX3 1397 aa30.22■■■□□ 2.43
CPNE9-205ENST00000613455 KDM6BO15054 1643 aa30.21■■■□□ 2.43
CPNE9-205ENST00000613455 HRCP23327 699 aa30.19■■■□□ 2.42
CPNE9-205ENST00000613455 PLXNC1O60486 1568 aa30.17■■■□□ 2.42
CPNE9-205ENST00000613455 ZFYVE16Q7Z3T8 1539 aa30.16■■■□□ 2.42
CPNE9-205ENST00000613455 AFAP1Q8N556 730 aa30.16■■■□□ 2.42
CPNE9-205ENST00000613455 POGZQ7Z3K3 1410 aa30.15■■■□□ 2.42
CPNE9-205ENST00000613455 TEX14Q8IWB6 1497 aa30.14■■■□□ 2.42
CPNE9-205ENST00000613455 INO80Q9ULG1 1556 aaPredicted RBP30.14■■■□□ 2.42
CPNE9-205ENST00000613455 ZNF518AQ6AHZ1 1483 aa30.14■■■□□ 2.42
CPNE9-205ENST00000613455 KIF15Q9NS87 1388 aa30.12■■■□□ 2.41
CPNE9-205ENST00000613455 KDM5CP41229 1560 aa30.12■■■□□ 2.41
CPNE9-205ENST00000613455 RTEL1-TNFRSF6BF6WH68 1400 aa30.11■■■□□ 2.41
CPNE9-205ENST00000613455 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
CPNE9-205ENST00000613455 CCER1Q8TC90 406 aaPredicted RBP30.1■■■□□ 2.41
CPNE9-205ENST00000613455 ATP7AQ04656 1500 aa30.09■■■□□ 2.41
CPNE9-205ENST00000613455 SPAG9O60271 1321 aaKnown RBP30.09■■■□□ 2.41
CPNE9-205ENST00000613455 RICTORQ6R327 1708 aa30.08■■■□□ 2.41
CPNE9-205ENST00000613455 DENND4BO75064 1496 aaPredicted RBP30.08■■■□□ 2.41
CPNE9-205ENST00000613455 ANKRD50Q9ULJ7 1429 aa30.06■■■□□ 2.4
CPNE9-205ENST00000613455 KIDINS220Q9ULH0 1771 aa30.05■■■□□ 2.4
CPNE9-205ENST00000613455 FRMPD1Q5SYB0 1578 aa30.03■■■□□ 2.4
CPNE9-205ENST00000613455 HECW2Q9P2P5 1572 aa30.02■■■□□ 2.4
CPNE9-205ENST00000613455 DUOX2Q9NRD8 1548 aa30.01■■■□□ 2.4
CPNE9-205ENST00000613455 MLH3Q9UHC1 1453 aa30■■■□□ 2.39
CPNE9-205ENST00000613455 RAPGEF3O95398 923 aa29.99■■■□□ 2.39
CPNE9-205ENST00000613455 ERBINQ96RT1 1412 aa29.94■■■□□ 2.38
CPNE9-205ENST00000613455 ZMYM4Q5VZL5 1548 aa29.93■■■□□ 2.38
CPNE9-205ENST00000613455 ACIN1Q9UKV3 1341 aaKnown RBP29.92■■■□□ 2.38
CPNE9-205ENST00000613455 ABCA6Q8N139 1617 aa29.91■■■□□ 2.38
CPNE9-205ENST00000613455 COL17A1Q9UMD9 1497 aaPredicted RBP29.9■■■□□ 2.38
CPNE9-205ENST00000613455 TRHP20396 242 aaPredicted RBP29.9■■■□□ 2.38
CPNE9-205ENST00000613455 TRIM52Q96A61 297 aa29.88■■■□□ 2.37
CPNE9-205ENST00000613455 MYT1LQ9UL68 1186 aa29.88■■■□□ 2.37
CPNE9-205ENST00000613455 UNC13BO14795 1591 aa29.88■■■□□ 2.37
CPNE9-205ENST00000613455 CLSPNQ9HAW4 1339 aa29.87■■■□□ 2.37
CPNE9-205ENST00000613455 KDM5DQ9BY66 1539 aa29.86■■■□□ 2.37
CPNE9-205ENST00000613455 DIP2CQ9Y2E4 1556 aa29.86■■■□□ 2.37
CPNE9-205ENST00000613455 PZPP20742 1482 aa29.85■■■□□ 2.37
CPNE9-205ENST00000613455 EIF2AK4Q9P2K8 1649 aaKnown RBP29.84■■■□□ 2.37
CPNE9-205ENST00000613455 DHX29Q7Z478 1369 aaKnown RBP29.83■■■□□ 2.37
CPNE9-205ENST00000613455 A2MP01023 1474 aa29.82■■■□□ 2.36
CPNE9-205ENST00000613455 MAGI2Q86UL8 1455 aa29.82■■■□□ 2.36
CPNE9-205ENST00000613455 YEATS2Q9ULM3 1422 aa29.81■■■□□ 2.36
CPNE9-205ENST00000613455 DEPDC5O75140 1603 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms