RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 SCAPERQ9BY12 1400 aa22.02■■□□□ 1.12
HMGB1P24-201ENST00000611897 PCF11O94913 1555 aaKnown RBP22.02■■□□□ 1.12
HMGB1P24-201ENST00000611897 SIGLEC1Q9BZZ2 1709 aa22.02■■□□□ 1.12
HMGB1P24-201ENST00000611897 PLCH2O75038 1416 aa22■■□□□ 1.11
HMGB1P24-201ENST00000611897 POGZQ7Z3K3 1410 aa22■■□□□ 1.11
HMGB1P24-201ENST00000611897 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
HMGB1P24-201ENST00000611897 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
HMGB1P24-201ENST00000611897 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
HMGB1P24-201ENST00000611897 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
HMGB1P24-201ENST00000611897 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
HMGB1P24-201ENST00000611897 CLIP1P30622 1438 aa21.95■■□□□ 1.1
HMGB1P24-201ENST00000611897 MAGI2Q86UL8 1455 aa21.95■■□□□ 1.1
HMGB1P24-201ENST00000611897 EFCAB2Q5VUJ9 269 aa21.94■■□□□ 1.1
HMGB1P24-201ENST00000611897 TROQ12816 1431 aaPredicted RBP21.94■■□□□ 1.1
HMGB1P24-201ENST00000611897 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
HMGB1P24-201ENST00000611897 HSPA2P54652 639 aa21.9■■□□□ 1.1
HMGB1P24-201ENST00000611897 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
HMGB1P24-201ENST00000611897 ATP10AO60312 1499 aa21.88■■□□□ 1.09
HMGB1P24-201ENST00000611897 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
HMGB1P24-201ENST00000611897 CDC42BPBQ9Y5S2 1711 aa21.85■■□□□ 1.09
HMGB1P24-201ENST00000611897 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
HMGB1P24-201ENST00000611897 FBXO41Q8TF61 875 aa21.84■■□□□ 1.09
HMGB1P24-201ENST00000611897 ARHGEF12Q9NZN5 1544 aa21.82■■□□□ 1.08
HMGB1P24-201ENST00000611897 PREX2Q70Z35 1606 aa21.82■■□□□ 1.08
HMGB1P24-201ENST00000611897 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
HMGB1P24-201ENST00000611897 KDM5CP41229 1560 aa21.82■■□□□ 1.08
HMGB1P24-201ENST00000611897 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
HMGB1P24-201ENST00000611897 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
HMGB1P24-201ENST00000611897 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
HMGB1P24-201ENST00000611897 ABCC1P33527 1531 aa21.77■■□□□ 1.08
HMGB1P24-201ENST00000611897 ITSN2Q9NZM3 1697 aa21.77■■□□□ 1.08
HMGB1P24-201ENST00000611897 CEBPAP49715 358 aaPredicted RBP21.77■■□□□ 1.08
HMGB1P24-201ENST00000611897 CDC42BPAQ5VT25 1732 aa21.76■■□□□ 1.07
HMGB1P24-201ENST00000611897 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
HMGB1P24-201ENST00000611897 FYCO1Q9BQS8 1478 aa21.75■■□□□ 1.07
HMGB1P24-201ENST00000611897 TRAPPC8Q9Y2L5 1435 aa21.74■■□□□ 1.07
HMGB1P24-201ENST00000611897 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
HMGB1P24-201ENST00000611897 MLH3Q9UHC1 1453 aa21.7■■□□□ 1.06
HMGB1P24-201ENST00000611897 REREQ9P2R6 1566 aa21.69■■□□□ 1.06
HMGB1P24-201ENST00000611897 ESF1Q9H501 851 aaKnown RBP21.68■■□□□ 1.06
HMGB1P24-201ENST00000611897 KIDINS220Q9ULH0 1771 aa21.67■■□□□ 1.06
HMGB1P24-201ENST00000611897 C3P01024 1663 aa21.66■■□□□ 1.06
HMGB1P24-201ENST00000611897 SYCP2Q9BX26 1530 aa21.66■■□□□ 1.06
HMGB1P24-201ENST00000611897 UHRF1BP1Q6BDS2 1440 aa21.66■■□□□ 1.06
HMGB1P24-201ENST00000611897 SAMD9LQ8IVG5 1584 aa21.65■■□□□ 1.06
HMGB1P24-201ENST00000611897 AGLP35573 1532 aa21.62■■□□□ 1.05
HMGB1P24-201ENST00000611897 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
HMGB1P24-201ENST00000611897 CERKQ8TCT0 537 aa21.6■■□□□ 1.05
HMGB1P24-201ENST00000611897 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
HMGB1P24-201ENST00000611897 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
HMGB1P24-201ENST00000611897 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
HMGB1P24-201ENST00000611897 MTUS2Q5JR59 1369 aa21.59■■□□□ 1.05
HMGB1P24-201ENST00000611897 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
HMGB1P24-201ENST00000611897 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
HMGB1P24-201ENST00000611897 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.04
HMGB1P24-201ENST00000611897 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
HMGB1P24-201ENST00000611897 ATP7AQ04656 1500 aa21.55■■□□□ 1.04
HMGB1P24-201ENST00000611897 CNTLNQ9NXG0 1405 aa21.54■■□□□ 1.04
HMGB1P24-201ENST00000611897 PLEKHH2Q8IVE3 1493 aa21.52■■□□□ 1.04
HMGB1P24-201ENST00000611897 INO80Q9ULG1 1556 aaPredicted RBP21.52■■□□□ 1.04
HMGB1P24-201ENST00000611897 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
HMGB1P24-201ENST00000611897 TIAM1Q13009 1591 aa21.5■■□□□ 1.03
HMGB1P24-201ENST00000611897 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
HMGB1P24-201ENST00000611897 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
HMGB1P24-201ENST00000611897 MROH2AA6NES4 1674 aa21.49■■□□□ 1.03
HMGB1P24-201ENST00000611897 A2MP01023 1474 aa21.48■■□□□ 1.03
HMGB1P24-201ENST00000611897 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
HMGB1P24-201ENST00000611897 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
HMGB1P24-201ENST00000611897 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
HMGB1P24-201ENST00000611897 PLXNC1O60486 1568 aa21.45■■□□□ 1.02
HMGB1P24-201ENST00000611897 GGT6Q6P531 493 aa21.45■■□□□ 1.02
HMGB1P24-201ENST00000611897 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
HMGB1P24-201ENST00000611897 ZMYM3Q14202 1370 aa21.43■■□□□ 1.02
HMGB1P24-201ENST00000611897 CAMSAP1Q5T5Y3 1602 aa21.43■■□□□ 1.02
HMGB1P24-201ENST00000611897 NCOA1Q15788 1441 aa21.42■■□□□ 1.02
HMGB1P24-201ENST00000611897 PTPRTO14522 1441 aa21.41■■□□□ 1.02
HMGB1P24-201ENST00000611897 NPATQ14207 1427 aa21.41■■□□□ 1.02
HMGB1P24-201ENST00000611897 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
HMGB1P24-201ENST00000611897 ZNF142P52746 1687 aaPredicted RBP21.35■■□□□ 1.01
HMGB1P24-201ENST00000611897 NCOA2Q15596 1464 aa21.35■■□□□ 1.01
HMGB1P24-201ENST00000611897 MBD5Q9P267 1494 aa21.35■■□□□ 1.01
HMGB1P24-201ENST00000611897 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
HMGB1P24-201ENST00000611897 NCKAP5LQ9HCH0 1330 aa21.34■■□□□ 1.01
HMGB1P24-201ENST00000611897 CAMSAP2Q08AD1 1489 aa21.34■■□□□ 1.01
HMGB1P24-201ENST00000611897 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
HMGB1P24-201ENST00000611897 LTBP4Q8N2S1 1624 aa21.33■■□□□ 1
HMGB1P24-201ENST00000611897 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
HMGB1P24-201ENST00000611897 RTEL1-TNFRSF6BF6WH68 1400 aa21.29■■□□□ 1
HMGB1P24-201ENST00000611897 KIF3BO15066 747 aa21.28■■□□□ 1
HMGB1P24-201ENST00000611897 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
HMGB1P24-201ENST00000611897 ZNF335Q9H4Z2 1342 aaPredicted RBP21.27■□□□□ 0.99
HMGB1P24-201ENST00000611897 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
HMGB1P24-201ENST00000611897 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
HMGB1P24-201ENST00000611897 KDM5DQ9BY66 1539 aa21.24■□□□□ 0.99
HMGB1P24-201ENST00000611897 PPP6R1Q9UPN7 881 aa21.23■□□□□ 0.99
HMGB1P24-201ENST00000611897 A2ML1A8K2U0 1454 aa21.22■□□□□ 0.99
HMGB1P24-201ENST00000611897 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
HMGB1P24-201ENST00000611897 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
HMGB1P24-201ENST00000611897 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
HMGB1P24-201ENST00000611897 TCOF1Q13428 1488 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms