RNA–Protein interactions for RNA: ENST00000609262.5

HNF4A-207, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-207ENST00000609262 BCORL1Q5H9F3 1711 aa28.69■■■□□ 2.18
HNF4A-207ENST00000609262 ZFYVE16Q7Z3T8 1539 aa28.69■■■□□ 2.18
HNF4A-207ENST00000609262 MAGI2Q86UL8 1455 aa28.68■■■□□ 2.18
HNF4A-207ENST00000609262 EFCAB2Q5VUJ9 269 aa28.68■■■□□ 2.18
HNF4A-207ENST00000609262 ARID4BQ4LE39 1312 aaPredicted RBP28.68■■■□□ 2.18
HNF4A-207ENST00000609262 FYCO1Q9BQS8 1478 aa28.67■■■□□ 2.18
HNF4A-207ENST00000609262 YEATS2Q9ULM3 1422 aa28.64■■■□□ 2.18
HNF4A-207ENST00000609262 PTPRMP28827 1452 aa28.64■■■□□ 2.17
HNF4A-207ENST00000609262 ARHGAP5Q13017 1502 aa28.64■■■□□ 2.17
HNF4A-207ENST00000609262 MADDQ8WXG6 1647 aa28.61■■■□□ 2.17
HNF4A-207ENST00000609262 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
HNF4A-207ENST00000609262 PREX2Q70Z35 1606 aa28.55■■■□□ 2.16
HNF4A-207ENST00000609262 SIGLEC1Q9BZZ2 1709 aa28.53■■■□□ 2.16
HNF4A-207ENST00000609262 CDC42BPBQ9Y5S2 1711 aa28.52■■■□□ 2.16
HNF4A-207ENST00000609262 KDM5CP41229 1560 aa28.52■■■□□ 2.16
HNF4A-207ENST00000609262 ATP10AO60312 1499 aa28.5■■■□□ 2.15
HNF4A-207ENST00000609262 RIMS1Q86UR5 1692 aaKnown RBP28.49■■■□□ 2.15
HNF4A-207ENST00000609262 C9orf84Q5VXU9 1444 aa28.49■■■□□ 2.15
HNF4A-207ENST00000609262 ABCC1P33527 1531 aa28.47■■■□□ 2.15
HNF4A-207ENST00000609262 AFAP1Q8N556 730 aa28.45■■■□□ 2.14
HNF4A-207ENST00000609262 CDC42BPAQ5VT25 1732 aa28.44■■■□□ 2.14
HNF4A-207ENST00000609262 CEP162Q5TB80 1403 aa28.42■■■□□ 2.14
HNF4A-207ENST00000609262 ARHGEF12Q9NZN5 1544 aa28.41■■■□□ 2.14
HNF4A-207ENST00000609262 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
HNF4A-207ENST00000609262 MLECQ14165 292 aa28.4■■■□□ 2.14
HNF4A-207ENST00000609262 MLH3Q9UHC1 1453 aa28.4■■■□□ 2.14
HNF4A-207ENST00000609262 DIP2CQ9Y2E4 1556 aa28.39■■■□□ 2.14
HNF4A-207ENST00000609262 TRAPPC8Q9Y2L5 1435 aa28.39■■■□□ 2.14
HNF4A-207ENST00000609262 FER1L4A9Z1Z3 1794 aa28.38■■■□□ 2.13
HNF4A-207ENST00000609262 MYT1LQ9UL68 1186 aa28.37■■■□□ 2.13
HNF4A-207ENST00000609262 GPATCH8Q9UKJ3 1502 aaKnown RBP28.37■■■□□ 2.13
HNF4A-207ENST00000609262 REREQ9P2R6 1566 aa28.37■■■□□ 2.13
HNF4A-207ENST00000609262 MTUS2Q5JR59 1369 aa28.36■■■□□ 2.13
HNF4A-207ENST00000609262 LMTK3Q96Q04 1460 aa28.35■■■□□ 2.13
HNF4A-207ENST00000609262 ABCA6Q8N139 1617 aa28.35■■■□□ 2.13
HNF4A-207ENST00000609262 SAMD9LQ8IVG5 1584 aa28.33■■■□□ 2.12
HNF4A-207ENST00000609262 CCNB3Q8WWL7 1395 aa28.3■■■□□ 2.12
HNF4A-207ENST00000609262 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
HNF4A-207ENST00000609262 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
HNF4A-207ENST00000609262 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
HNF4A-207ENST00000609262 PLPPR3Q6T4P5 718 aa28.28■■■□□ 2.12
HNF4A-207ENST00000609262 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
HNF4A-207ENST00000609262 KIDINS220Q9ULH0 1771 aa28.27■■■□□ 2.12
HNF4A-207ENST00000609262 CFDP1Q9UEE9 299 aaPredicted RBP28.26■■■□□ 2.11
HNF4A-207ENST00000609262 AGLP35573 1532 aa28.26■■■□□ 2.11
HNF4A-207ENST00000609262 KIAA1107Q9UPP5 1409 aa28.25■■■□□ 2.11
HNF4A-207ENST00000609262 TIAM1Q13009 1591 aa28.22■■■□□ 2.11
HNF4A-207ENST00000609262 HNRNPMP52272 730 aaKnown RBP eCLIP28.19■■■□□ 2.12e-6■■■■□ 20.4
HNF4A-207ENST00000609262 ILDR1Q86SU0 546 aaPredicted RBP28.19■■■□□ 2.1
HNF4A-207ENST00000609262 SPAG9O60271 1321 aaKnown RBP28.18■■■□□ 2.1
HNF4A-207ENST00000609262 ATP7AQ04656 1500 aa28.16■■■□□ 2.1
HNF4A-207ENST00000609262 INO80Q9ULG1 1556 aaPredicted RBP28.15■■■□□ 2.1
HNF4A-207ENST00000609262 LOC105371045A0A1W2PR82 267 aa28.14■■■□□ 2.1
HNF4A-207ENST00000609262 HSPA2P54652 639 aa28.14■■■□□ 2.1
HNF4A-207ENST00000609262 VPS8Q8N3P4 1428 aa28.13■■■□□ 2.09
HNF4A-207ENST00000609262 CEBPAP49715 358 aaPredicted RBP28.13■■■□□ 2.09
HNF4A-207ENST00000609262 PREX1Q8TCU6 1659 aa28.12■■■□□ 2.09
HNF4A-207ENST00000609262 SUPT6HQ7KZ85 1726 aaKnown RBP28.1■■■□□ 2.09
HNF4A-207ENST00000609262 NCOA2Q15596 1464 aa28.09■■■□□ 2.09
HNF4A-207ENST00000609262 ESF1Q9H501 851 aaKnown RBP28.09■■■□□ 2.09
HNF4A-207ENST00000609262 CNTLNQ9NXG0 1405 aa28.09■■■□□ 2.09
HNF4A-207ENST00000609262 ZNF644Q9H582 1327 aaPredicted RBP28.08■■■□□ 2.09
HNF4A-207ENST00000609262 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
HNF4A-207ENST00000609262 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
HNF4A-207ENST00000609262 A2MP01023 1474 aa28.06■■■□□ 2.08
HNF4A-207ENST00000609262 C3P01024 1663 aa28.06■■■□□ 2.08
HNF4A-207ENST00000609262 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
HNF4A-207ENST00000609262 CAMSAP2Q08AD1 1489 aa28■■■□□ 2.07
HNF4A-207ENST00000609262 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
HNF4A-207ENST00000609262 ADGBQ8N7X0 1667 aa28■■■□□ 2.07
HNF4A-207ENST00000609262 RTEL1-TNFRSF6BF6WH68 1400 aa28■■■□□ 2.07
HNF4A-207ENST00000609262 SETD1BQ9UPS6 1966 aaKnown RBP27.99■■■□□ 2.07
HNF4A-207ENST00000609262 MROH2AA6NES4 1674 aa27.98■■■□□ 2.07
HNF4A-207ENST00000609262 CCDC141Q6ZP82 1450 aa27.97■■■□□ 2.07
HNF4A-207ENST00000609262 MAP3K1Q13233 1512 aa27.97■■■□□ 2.07
HNF4A-207ENST00000609262 NPATQ14207 1427 aa27.92■■■□□ 2.06
HNF4A-207ENST00000609262 FBXO41Q8TF61 875 aa27.92■■■□□ 2.06
HNF4A-207ENST00000609262 RSPH4AQ5TD94 716 aa27.91■■■□□ 2.06
HNF4A-207ENST00000609262 ZMYM3Q14202 1370 aa27.9■■■□□ 2.06
HNF4A-207ENST00000609262 ARHGEF5Q12774 1597 aa27.9■■■□□ 2.06
HNF4A-207ENST00000609262 CLTCQ00610 1675 aaKnown RBP27.89■■■□□ 2.06
HNF4A-207ENST00000609262 DHX29Q7Z478 1369 aaKnown RBP27.88■■■□□ 2.05
HNF4A-207ENST00000609262 GGT6Q6P531 493 aa27.88■■■□□ 2.05
HNF4A-207ENST00000609262 KANK4Q5T7N3 995 aaPredicted RBP27.86■■■□□ 2.05
HNF4A-207ENST00000609262 PPP6R1Q9UPN7 881 aa27.86■■■□□ 2.05
HNF4A-207ENST00000609262 STRCQ7RTU9 1775 aa27.85■■■□□ 2.05
HNF4A-207ENST00000609262 DMRT2Q9Y5R5 561 aa27.83■■■□□ 2.05
HNF4A-207ENST00000609262 MYOM3Q5VTT5 1437 aa27.81■■■□□ 2.04
HNF4A-207ENST00000609262 PTPRKQ15262 1439 aa27.8■■■□□ 2.04
HNF4A-207ENST00000609262 MIA2Q96PC5 1412 aa27.8■■■□□ 2.04
HNF4A-207ENST00000609262 TSPY4P0CV99 314 aa27.79■■■□□ 2.04
HNF4A-207ENST00000609262 TSPY10P0CW01 314 aa27.79■■■□□ 2.04
HNF4A-207ENST00000609262 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
HNF4A-207ENST00000609262 PTPRTO14522 1441 aa27.76■■■□□ 2.04
HNF4A-207ENST00000609262 NCOA1Q15788 1441 aa27.76■■■□□ 2.04
HNF4A-207ENST00000609262 KIF3BO15066 747 aa27.76■■■□□ 2.03
HNF4A-207ENST00000609262 MYO3AQ8NEV4 1616 aa27.76■■■□□ 2.03
HNF4A-207ENST00000609262 MAST1Q9Y2H9 1570 aa27.76■■■□□ 2.03
HNF4A-207ENST00000609262 CERKQ8TCT0 537 aa27.74■■■□□ 2.03
HNF4A-207ENST00000609262 ZNF142P52746 1687 aaPredicted RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms