RNA–Protein interactions for RNA: ENST00000609015.5

LINC02028-216, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5 BASIC

Gene LINC02028, Length 732 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-216ENST00000609015 ZFYVE16Q7Z3T8 1539 aa24.42■■□□□ 1.5
LINC02028-216ENST00000609015 POGZQ7Z3K3 1410 aa24.4■■□□□ 1.5
LINC02028-216ENST00000609015 SCAPERQ9BY12 1400 aa24.4■■□□□ 1.5
LINC02028-216ENST00000609015 PCF11O94913 1555 aaKnown RBP24.38■■□□□ 1.49
LINC02028-216ENST00000609015 TROQ12816 1431 aaPredicted RBP24.37■■□□□ 1.49
LINC02028-216ENST00000609015 MAGI2Q86UL8 1455 aa24.33■■□□□ 1.49
LINC02028-216ENST00000609015 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
LINC02028-216ENST00000609015 LMTK3Q96Q04 1460 aa24.32■■□□□ 1.48
LINC02028-216ENST00000609015 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
LINC02028-216ENST00000609015 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
LINC02028-216ENST00000609015 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
LINC02028-216ENST00000609015 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
LINC02028-216ENST00000609015 FER1L4A9Z1Z3 1794 aa24.28■■□□□ 1.48
LINC02028-216ENST00000609015 MLECQ14165 292 aa24.27■■□□□ 1.48
LINC02028-216ENST00000609015 PLPPR3Q6T4P5 718 aa24.27■■□□□ 1.48
LINC02028-216ENST00000609015 CLIP1P30622 1438 aa24.27■■□□□ 1.48
LINC02028-216ENST00000609015 ATP10AO60312 1499 aa24.25■■□□□ 1.47
LINC02028-216ENST00000609015 KDM5CP41229 1560 aa24.25■■□□□ 1.47
LINC02028-216ENST00000609015 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
LINC02028-216ENST00000609015 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
LINC02028-216ENST00000609015 CCDC18Q5T9S5 1454 aa24.22■■□□□ 1.47
LINC02028-216ENST00000609015 ZNF518AQ6AHZ1 1483 aa24.22■■□□□ 1.47
LINC02028-216ENST00000609015 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
LINC02028-216ENST00000609015 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
LINC02028-216ENST00000609015 C9orf84Q5VXU9 1444 aa24.21■■□□□ 1.47
LINC02028-216ENST00000609015 DIP2CQ9Y2E4 1556 aa24.2■■□□□ 1.46
LINC02028-216ENST00000609015 ABCA6Q8N139 1617 aa24.19■■□□□ 1.46
LINC02028-216ENST00000609015 ABCC1P33527 1531 aa24.19■■□□□ 1.46
LINC02028-216ENST00000609015 FYCO1Q9BQS8 1478 aa24.19■■□□□ 1.46
LINC02028-216ENST00000609015 HSPA2P54652 639 aa24.18■■□□□ 1.46
LINC02028-216ENST00000609015 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
LINC02028-216ENST00000609015 TRAPPC8Q9Y2L5 1435 aa24.17■■□□□ 1.46
LINC02028-216ENST00000609015 MLH3Q9UHC1 1453 aa24.11■■□□□ 1.45
LINC02028-216ENST00000609015 CEBPAP49715 358 aaPredicted RBP24.1■■□□□ 1.45
LINC02028-216ENST00000609015 SAMD9LQ8IVG5 1584 aa24.1■■□□□ 1.45
LINC02028-216ENST00000609015 KIDINS220Q9ULH0 1771 aa24.1■■□□□ 1.45
LINC02028-216ENST00000609015 REREQ9P2R6 1566 aa24.09■■□□□ 1.45
LINC02028-216ENST00000609015 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
LINC02028-216ENST00000609015 GPATCH8Q9UKJ3 1502 aaKnown RBP24.06■■□□□ 1.44
LINC02028-216ENST00000609015 PREX1Q8TCU6 1659 aa24.05■■□□□ 1.44
LINC02028-216ENST00000609015 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
LINC02028-216ENST00000609015 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
LINC02028-216ENST00000609015 C3P01024 1663 aa24.02■■□□□ 1.44
LINC02028-216ENST00000609015 AGLP35573 1532 aa24■■□□□ 1.43
LINC02028-216ENST00000609015 FBXO41Q8TF61 875 aa23.99■■□□□ 1.43
LINC02028-216ENST00000609015 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.43
LINC02028-216ENST00000609015 STRCQ7RTU9 1775 aa23.95■■□□□ 1.42
LINC02028-216ENST00000609015 SUPT6HQ7KZ85 1726 aaKnown RBP23.93■■□□□ 1.42
LINC02028-216ENST00000609015 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
LINC02028-216ENST00000609015 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
LINC02028-216ENST00000609015 CEP162Q5TB80 1403 aa23.93■■□□□ 1.42
LINC02028-216ENST00000609015 MTUS2Q5JR59 1369 aa23.91■■□□□ 1.42
LINC02028-216ENST00000609015 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
LINC02028-216ENST00000609015 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
LINC02028-216ENST00000609015 CFDP1Q9UEE9 299 aaPredicted RBP23.9■■□□□ 1.42
LINC02028-216ENST00000609015 SPAG9O60271 1321 aaKnown RBP23.89■■□□□ 1.42
LINC02028-216ENST00000609015 ZNF644Q9H582 1327 aaPredicted RBP23.89■■□□□ 1.42
LINC02028-216ENST00000609015 SETD1BQ9UPS6 1966 aaKnown RBP23.89■■□□□ 1.42
LINC02028-216ENST00000609015 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
LINC02028-216ENST00000609015 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
LINC02028-216ENST00000609015 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
LINC02028-216ENST00000609015 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
LINC02028-216ENST00000609015 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
LINC02028-216ENST00000609015 MROH2AA6NES4 1674 aa23.83■■□□□ 1.4
LINC02028-216ENST00000609015 CLTCQ00610 1675 aaKnown RBP23.83■■□□□ 1.4
LINC02028-216ENST00000609015 A2MP01023 1474 aa23.81■■□□□ 1.4
LINC02028-216ENST00000609015 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
LINC02028-216ENST00000609015 CERKQ8TCT0 537 aa23.8■■□□□ 1.4
LINC02028-216ENST00000609015 ESF1Q9H501 851 aaKnown RBP23.8■■□□□ 1.4
LINC02028-216ENST00000609015 CNTLNQ9NXG0 1405 aa23.8■■□□□ 1.4
LINC02028-216ENST00000609015 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
LINC02028-216ENST00000609015 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
LINC02028-216ENST00000609015 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
LINC02028-216ENST00000609015 LOC105371045A0A1W2PR82 267 aa23.75■■□□□ 1.39
LINC02028-216ENST00000609015 NPATQ14207 1427 aa23.72■■□□□ 1.39
LINC02028-216ENST00000609015 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
LINC02028-216ENST00000609015 GGT6Q6P531 493 aa23.71■■□□□ 1.39
LINC02028-216ENST00000609015 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.39
LINC02028-216ENST00000609015 NCOA1Q15788 1441 aa23.7■■□□□ 1.38
LINC02028-216ENST00000609015 CAMSAP1Q5T5Y3 1602 aa23.7■■□□□ 1.38
LINC02028-216ENST00000609015 PTPRKQ15262 1439 aa23.68■■□□□ 1.38
LINC02028-216ENST00000609015 PTPRTO14522 1441 aa23.67■■□□□ 1.38
LINC02028-216ENST00000609015 DMRT2Q9Y5R5 561 aa23.67■■□□□ 1.38
LINC02028-216ENST00000609015 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
LINC02028-216ENST00000609015 CCDC141Q6ZP82 1450 aa23.66■■□□□ 1.38
LINC02028-216ENST00000609015 ZNF142P52746 1687 aaPredicted RBP23.66■■□□□ 1.38
LINC02028-216ENST00000609015 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
LINC02028-216ENST00000609015 LTBP4Q8N2S1 1624 aa23.64■■□□□ 1.38
LINC02028-216ENST00000609015 LRRC9Q6ZRR7 1453 aa23.63■■□□□ 1.37
LINC02028-216ENST00000609015 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
LINC02028-216ENST00000609015 DHX29Q7Z478 1369 aaKnown RBP23.63■■□□□ 1.37
LINC02028-216ENST00000609015 NCKAP5LQ9HCH0 1330 aa23.6■■□□□ 1.37
LINC02028-216ENST00000609015 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
LINC02028-216ENST00000609015 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
LINC02028-216ENST00000609015 KIF3BO15066 747 aa23.57■■□□□ 1.36
LINC02028-216ENST00000609015 FBXO31Q5XUX0 539 aaPredicted RBP23.54■■□□□ 1.36
LINC02028-216ENST00000609015 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
LINC02028-216ENST00000609015 DNMT1P26358 1616 aaKnown RBP23.53■■□□□ 1.36
LINC02028-216ENST00000609015 PLA2R1Q13018 1463 aa23.53■■□□□ 1.36
LINC02028-216ENST00000609015 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms