RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 TMC2Q8TDI7 906 aa15□□□□□ -0.01
LINC00343-211ENST00000608426 TMEM92Q6UXU6 159 aa14.99□□□□□ -0.01
LINC00343-211ENST00000608426 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
LINC00343-211ENST00000608426 PDE4AP27815 886 aa14.97□□□□□ -0.01
LINC00343-211ENST00000608426 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
LINC00343-211ENST00000608426 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
LINC00343-211ENST00000608426 C2orf72A6NCS6 295 aa14.96□□□□□ -0.01
LINC00343-211ENST00000608426 CRISPLD2Q9H0B8 497 aa14.95□□□□□ -0.02
LINC00343-211ENST00000608426 GPHNQ9NQX3 736 aaPredicted RBP14.94□□□□□ -0.02
LINC00343-211ENST00000608426 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
LINC00343-211ENST00000608426 LARP6Q9BRS8 491 aaKnown RBP14.93□□□□□ -0.02
LINC00343-211ENST00000608426 KIF3CO14782 793 aa14.91□□□□□ -0.02
LINC00343-211ENST00000608426 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
LINC00343-211ENST00000608426 DDX27Q96GQ7 796 aaKnown RBP14.87□□□□□ -0.03
LINC00343-211ENST00000608426 WDR70Q9NW82 654 aa14.87□□□□□ -0.03
LINC00343-211ENST00000608426 DSG2Q14126 1118 aa14.85□□□□□ -0.03
LINC00343-211ENST00000608426 PPP1R15BQ5SWA1 713 aa14.85□□□□□ -0.03
LINC00343-211ENST00000608426 FOXK1P85037 733 aa14.84□□□□□ -0.03
LINC00343-211ENST00000608426 MFSD10Q14728 455 aa14.84□□□□□ -0.03
LINC00343-211ENST00000608426 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
LINC00343-211ENST00000608426 PLPP6Q8IY26 295 aa14.82□□□□□ -0.04
LINC00343-211ENST00000608426 SNPHO15079 494 aa14.72□□□□□ -0.05
LINC00343-211ENST00000608426 E2F4Q16254 413 aa14.71□□□□□ -0.05
LINC00343-211ENST00000608426 DOK7Q18PE1 504 aa14.7□□□□□ -0.06
LINC00343-211ENST00000608426 HOXB3P14651 431 aaPredicted RBP14.68□□□□□ -0.06
LINC00343-211ENST00000608426 CAMK2BQ13554 666 aa14.66□□□□□ -0.06
LINC00343-211ENST00000608426 ZNF710Q8N1W2 664 aa14.66□□□□□ -0.06
LINC00343-211ENST00000608426 UPF1Q92900 1129 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00343-211ENST00000608426 RIMBP2O15034 1052 aa14.65□□□□□ -0.06
LINC00343-211ENST00000608426 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
LINC00343-211ENST00000608426 SLC34A2O95436 690 aa14.63□□□□□ -0.07
LINC00343-211ENST00000608426 P3H3Q8IVL6 736 aa14.62□□□□□ -0.07
LINC00343-211ENST00000608426 KCNV2Q8TDN2 545 aa14.62□□□□□ -0.07
LINC00343-211ENST00000608426 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
LINC00343-211ENST00000608426 PTCD2Q8WV60 388 aaKnown RBP14.59□□□□□ -0.07
LINC00343-211ENST00000608426 PCDHGA4Q9Y5G9 962 aa14.59□□□□□ -0.07
LINC00343-211ENST00000608426 TBC1D12O60347 775 aa14.58□□□□□ -0.08
LINC00343-211ENST00000608426 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
LINC00343-211ENST00000608426 DPYSL4O14531 572 aa14.57□□□□□ -0.08
LINC00343-211ENST00000608426 MAP3K9P80192 1104 aa14.57□□□□□ -0.08
LINC00343-211ENST00000608426 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
LINC00343-211ENST00000608426 ARSIQ5FYB1 569 aa14.55□□□□□ -0.08
LINC00343-211ENST00000608426 ST18O60284 1047 aa14.53□□□□□ -0.08
LINC00343-211ENST00000608426 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00343-211ENST00000608426 GPR153Q6NV75 609 aa14.52□□□□□ -0.09
LINC00343-211ENST00000608426 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.09
LINC00343-211ENST00000608426 NUDT7P0C024 238 aa14.49□□□□□ -0.09
LINC00343-211ENST00000608426 HOXB1P14653 301 aaPredicted RBP14.49□□□□□ -0.09
LINC00343-211ENST00000608426 ARIH1Q9Y4X5 557 aaPredicted RBP14.49□□□□□ -0.09
LINC00343-211ENST00000608426 ZNF316A6NFI3 1004 aaPredicted RBP14.47□□□□□ -0.09
LINC00343-211ENST00000608426 EVI5O60447 810 aa14.47□□□□□ -0.09
LINC00343-211ENST00000608426 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
LINC00343-211ENST00000608426 PDIA6Q15084 440 aa14.43□□□□□ -0.1
LINC00343-211ENST00000608426 LCE2DQ5TA82 110 aaPredicted RBP14.42□□□□□ -0.1
LINC00343-211ENST00000608426 MARVELD3Q96A59 401 aa14.42□□□□□ -0.1
LINC00343-211ENST00000608426 EMP3P54852 163 aa14.4□□□□□ -0.1
LINC00343-211ENST00000608426 KDM4FA0A1W2PPD8 638 aa14.39□□□□□ -0.11
LINC00343-211ENST00000608426 NBR1Q14596 966 aa14.37□□□□□ -0.11
LINC00343-211ENST00000608426 LHX6Q9UPM6 363 aa14.37□□□□□ -0.11
LINC00343-211ENST00000608426 ANO8Q9HCE9 1232 aaPredicted RBP14.36□□□□□ -0.11
LINC00343-211ENST00000608426 SEMA3EO15041 775 aa14.34□□□□□ -0.11
LINC00343-211ENST00000608426 ERBB3P21860 1342 aa14.34□□□□□ -0.11
LINC00343-211ENST00000608426 DDX12PQ92771 950 aa14.32□□□□□ -0.12
LINC00343-211ENST00000608426 FAM205CA6NFA0 338 aa14.31□□□□□ -0.12
LINC00343-211ENST00000608426 GRXCR2A6NFK2 248 aa14.3□□□□□ -0.12
LINC00343-211ENST00000608426 PTGER2P43116 358 aa14.29□□□□□ -0.12
LINC00343-211ENST00000608426 ZNF454Q8N9F8 522 aa14.29□□□□□ -0.12
LINC00343-211ENST00000608426 MLLT3P42568 568 aaPredicted RBP14.28□□□□□ -0.12
LINC00343-211ENST00000608426 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
LINC00343-211ENST00000608426 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
LINC00343-211ENST00000608426 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
LINC00343-211ENST00000608426 FOSBP53539 338 aa14.25□□□□□ -0.13
LINC00343-211ENST00000608426 BCANQ96GW7 911 aa14.25□□□□□ -0.13
LINC00343-211ENST00000608426 TESPA1A2RU30 521 aaPredicted RBP14.24□□□□□ -0.13
LINC00343-211ENST00000608426 PHF14O94880 888 aa14.24□□□□□ -0.13
LINC00343-211ENST00000608426 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
LINC00343-211ENST00000608426 HS3ST6Q96QI5 342 aa14.24□□□□□ -0.13
LINC00343-211ENST00000608426 PCDHGA10Q9Y5H3 936 aa14.23□□□□□ -0.13
LINC00343-211ENST00000608426 SMYD5Q6GMV2 418 aa14.21□□□□□ -0.13
LINC00343-211ENST00000608426 EPAS1Q99814 870 aa14.21□□□□□ -0.13
LINC00343-211ENST00000608426 POTEMA6NI47 508 aa14.2□□□□□ -0.14
LINC00343-211ENST00000608426 TYW1BQ6NUM6 668 aa14.2□□□□□ -0.14
LINC00343-211ENST00000608426 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
LINC00343-211ENST00000608426 ZDHHC16Q969W1 377 aa14.2□□□□□ -0.14
LINC00343-211ENST00000608426 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
LINC00343-211ENST00000608426 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
LINC00343-211ENST00000608426 RBM33Q96EV2 1170 aaKnown RBP14.18□□□□□ -0.14
LINC00343-211ENST00000608426 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
LINC00343-211ENST00000608426 FBXW7Q969H0 707 aa14.17□□□□□ -0.14
LINC00343-211ENST00000608426 OSBPP22059 807 aa14.16□□□□□ -0.14
LINC00343-211ENST00000608426 ADAM33Q9BZ11 813 aa14.15□□□□□ -0.14
LINC00343-211ENST00000608426 MAP3K7O43318 606 aa14.13□□□□□ -0.15
LINC00343-211ENST00000608426 EN1Q05925 392 aaPredicted RBP14.13□□□□□ -0.15
LINC00343-211ENST00000608426 ZNF687Q8N1G0 1237 aa14.13□□□□□ -0.15
LINC00343-211ENST00000608426 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
LINC00343-211ENST00000608426 BCL2L12Q9HB09 334 aa14.1□□□□□ -0.15
LINC00343-211ENST00000608426 RBM26Q5T8P6 1007 aaKnown RBP14.09□□□□□ -0.15
LINC00343-211ENST00000608426 PTPREP23469 700 aa14.08□□□□□ -0.16
LINC00343-211ENST00000608426 KCNH8Q96L42 1107 aa14.08□□□□□ -0.16
LINC00343-211ENST00000608426 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms