RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
RFTN1-212ENST00000607320 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
RFTN1-212ENST00000607320 ADAMTSL3P82987 1691 aa17.44■□□□□ 0.38
RFTN1-212ENST00000607320 PLCH2O75038 1416 aa17.44■□□□□ 0.38
RFTN1-212ENST00000607320 KIF14Q15058 1648 aa17.43■□□□□ 0.38
RFTN1-212ENST00000607320 BCORL1Q5H9F3 1711 aa17.43■□□□□ 0.38
RFTN1-212ENST00000607320 LRRIQ1Q96JM4 1722 aa17.42■□□□□ 0.38
RFTN1-212ENST00000607320 CLIP1P30622 1438 aa17.42■□□□□ 0.38
RFTN1-212ENST00000607320 ARID4BQ4LE39 1312 aaPredicted RBP17.42■□□□□ 0.38
RFTN1-212ENST00000607320 ZMYM4Q5VZL5 1548 aa17.42■□□□□ 0.38
RFTN1-212ENST00000607320 TROQ12816 1431 aaPredicted RBP17.41■□□□□ 0.38
RFTN1-212ENST00000607320 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
RFTN1-212ENST00000607320 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
RFTN1-212ENST00000607320 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
RFTN1-212ENST00000607320 ZFYVE16Q7Z3T8 1539 aa17.38■□□□□ 0.37
RFTN1-212ENST00000607320 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
RFTN1-212ENST00000607320 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
RFTN1-212ENST00000607320 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
RFTN1-212ENST00000607320 PTPRMP28827 1452 aa17.37■□□□□ 0.37
RFTN1-212ENST00000607320 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
RFTN1-212ENST00000607320 MADDQ8WXG6 1647 aa17.36■□□□□ 0.37
RFTN1-212ENST00000607320 ZBTB22O15209 634 aa17.35■□□□□ 0.37
RFTN1-212ENST00000607320 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
RFTN1-212ENST00000607320 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
RFTN1-212ENST00000607320 YEATS2Q9ULM3 1422 aa17.33■□□□□ 0.36
RFTN1-212ENST00000607320 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
RFTN1-212ENST00000607320 CDC42BPBQ9Y5S2 1711 aa17.32■□□□□ 0.36
RFTN1-212ENST00000607320 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
RFTN1-212ENST00000607320 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
RFTN1-212ENST00000607320 SIGLEC1Q9BZZ2 1709 aa17.28■□□□□ 0.36
RFTN1-212ENST00000607320 MSH5O43196 834 aa17.28■□□□□ 0.36
RFTN1-212ENST00000607320 ATP10AO60312 1499 aa17.27■□□□□ 0.36
RFTN1-212ENST00000607320 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
RFTN1-212ENST00000607320 FER1L4A9Z1Z3 1794 aa17.27■□□□□ 0.35
RFTN1-212ENST00000607320 KDM5CP41229 1560 aa17.27■□□□□ 0.35
RFTN1-212ENST00000607320 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
RFTN1-212ENST00000607320 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
RFTN1-212ENST00000607320 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
RFTN1-212ENST00000607320 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
RFTN1-212ENST00000607320 ABCC1P33527 1531 aa17.22■□□□□ 0.35
RFTN1-212ENST00000607320 MLECQ14165 292 aa17.22■□□□□ 0.35
RFTN1-212ENST00000607320 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
RFTN1-212ENST00000607320 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
RFTN1-212ENST00000607320 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
RFTN1-212ENST00000607320 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
RFTN1-212ENST00000607320 LMTK3Q96Q04 1460 aa17.18■□□□□ 0.34
RFTN1-212ENST00000607320 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
RFTN1-212ENST00000607320 ABCA6Q8N139 1617 aa17.17■□□□□ 0.34
RFTN1-212ENST00000607320 ILDR1Q86SU0 546 aaPredicted RBP17.16■□□□□ 0.34
RFTN1-212ENST00000607320 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
RFTN1-212ENST00000607320 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
RFTN1-212ENST00000607320 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
RFTN1-212ENST00000607320 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
RFTN1-212ENST00000607320 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
RFTN1-212ENST00000607320 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
RFTN1-212ENST00000607320 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
RFTN1-212ENST00000607320 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
RFTN1-212ENST00000607320 CCNB3Q8WWL7 1395 aa17.13■□□□□ 0.33
RFTN1-212ENST00000607320 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
RFTN1-212ENST00000607320 AGLP35573 1532 aa17.12■□□□□ 0.33
RFTN1-212ENST00000607320 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
RFTN1-212ENST00000607320 CFDP1Q9UEE9 299 aaPredicted RBP17.11■□□□□ 0.33
RFTN1-212ENST00000607320 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
RFTN1-212ENST00000607320 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
RFTN1-212ENST00000607320 KIAA1107Q9UPP5 1409 aa17.09■□□□□ 0.33
RFTN1-212ENST00000607320 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
RFTN1-212ENST00000607320 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
RFTN1-212ENST00000607320 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
RFTN1-212ENST00000607320 HSPA2P54652 639 aa17.07■□□□□ 0.32
RFTN1-212ENST00000607320 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
RFTN1-212ENST00000607320 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
RFTN1-212ENST00000607320 C3P01024 1663 aa17.05■□□□□ 0.32
RFTN1-212ENST00000607320 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-212ENST00000607320 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-212ENST00000607320 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
RFTN1-212ENST00000607320 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
RFTN1-212ENST00000607320 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.31
RFTN1-212ENST00000607320 RNF216Q9NWF9 866 aaPredicted RBP17■□□□□ 0.31
RFTN1-212ENST00000607320 MROH2AA6NES4 1674 aa17■□□□□ 0.31
RFTN1-212ENST00000607320 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
RFTN1-212ENST00000607320 FBXO41Q8TF61 875 aa16.99■□□□□ 0.31
RFTN1-212ENST00000607320 A2MP01023 1474 aa16.99■□□□□ 0.31
RFTN1-212ENST00000607320 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
RFTN1-212ENST00000607320 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
RFTN1-212ENST00000607320 MAPK8IP2Q13387 824 aaPredicted RBP16.97■□□□□ 0.31
RFTN1-212ENST00000607320 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
RFTN1-212ENST00000607320 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.31
RFTN1-212ENST00000607320 LOC105371045A0A1W2PR82 267 aa16.96■□□□□ 0.31
RFTN1-212ENST00000607320 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
RFTN1-212ENST00000607320 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
RFTN1-212ENST00000607320 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
RFTN1-212ENST00000607320 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
RFTN1-212ENST00000607320 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
RFTN1-212ENST00000607320 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
RFTN1-212ENST00000607320 CAMSAP2Q08AD1 1489 aa16.93■□□□□ 0.3
RFTN1-212ENST00000607320 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
RFTN1-212ENST00000607320 NPATQ14207 1427 aa16.92■□□□□ 0.3
RFTN1-212ENST00000607320 ZMYM3Q14202 1370 aa16.91■□□□□ 0.3
RFTN1-212ENST00000607320 LRRC9Q6ZRR7 1453 aa16.91■□□□□ 0.3
RFTN1-212ENST00000607320 GGT6Q6P531 493 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms