RNA–Protein interactions for RNA: ENST00000607316.2

TMEM259-212, Transcript of transmembrane protein 259, humanhuman

TSL 2

Gene TMEM259, Length 477 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-212ENST00000607316 RICTORQ6R327 1708 aa21.7■■□□□ 1.06
TMEM259-212ENST00000607316 EHBP1L1Q8N3D4 1523 aa21.7■■□□□ 1.06
TMEM259-212ENST00000607316 DENND4BO75064 1496 aaPredicted RBP21.69■■□□□ 1.06
TMEM259-212ENST00000607316 SCAPERQ9BY12 1400 aa21.67■■□□□ 1.06
TMEM259-212ENST00000607316 EFCAB2Q5VUJ9 269 aa21.66■■□□□ 1.06
TMEM259-212ENST00000607316 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
TMEM259-212ENST00000607316 POGZQ7Z3K3 1410 aa21.63■■□□□ 1.05
TMEM259-212ENST00000607316 ABCC1P33527 1531 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 ARHGEF12Q9NZN5 1544 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 KDM4FA0A1W2PPD8 638 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 SAMD9LQ8IVG5 1584 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 CCNB3Q8WWL7 1395 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
TMEM259-212ENST00000607316 LRRC9Q6ZRR7 1453 aa21.59■■□□□ 1.05
TMEM259-212ENST00000607316 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
TMEM259-212ENST00000607316 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
TMEM259-212ENST00000607316 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
TMEM259-212ENST00000607316 SUPT6HQ7KZ85 1726 aaKnown RBP21.58■■□□□ 1.04
TMEM259-212ENST00000607316 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
TMEM259-212ENST00000607316 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
TMEM259-212ENST00000607316 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
TMEM259-212ENST00000607316 MAP3K1Q13233 1512 aa21.55■■□□□ 1.04
TMEM259-212ENST00000607316 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
TMEM259-212ENST00000607316 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
TMEM259-212ENST00000607316 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
TMEM259-212ENST00000607316 AFAP1Q8N556 730 aa21.54■■□□□ 1.04
TMEM259-212ENST00000607316 KDM5CP41229 1560 aa21.53■■□□□ 1.04
TMEM259-212ENST00000607316 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
TMEM259-212ENST00000607316 SIGLEC1Q9BZZ2 1709 aa21.53■■□□□ 1.04
TMEM259-212ENST00000607316 CFDP1Q9UEE9 299 aaPredicted RBP21.53■■□□□ 1.04
TMEM259-212ENST00000607316 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
TMEM259-212ENST00000607316 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
TMEM259-212ENST00000607316 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
TMEM259-212ENST00000607316 HECW2Q9P2P5 1572 aa21.48■■□□□ 1.03
TMEM259-212ENST00000607316 HNRNPMP52272 730 aaKnown RBP eCLIP21.47■■□□□ 1.038e-11■■□□□ 12.6
TMEM259-212ENST00000607316 ABCA6Q8N139 1617 aa21.45■■□□□ 1.02
TMEM259-212ENST00000607316 APLP2Q06481 763 aa21.44■■□□□ 1.02
TMEM259-212ENST00000607316 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
TMEM259-212ENST00000607316 ARID4BQ4LE39 1312 aaPredicted RBP21.43■■□□□ 1.02
TMEM259-212ENST00000607316 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
TMEM259-212ENST00000607316 CAMSAP2Q08AD1 1489 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 BCORL1Q5H9F3 1711 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 MYT1LQ9UL68 1186 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
TMEM259-212ENST00000607316 ATP10AO60312 1499 aa21.4■■□□□ 1.02
TMEM259-212ENST00000607316 MBD5Q9P267 1494 aa21.4■■□□□ 1.02
TMEM259-212ENST00000607316 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.02
TMEM259-212ENST00000607316 ADAMTSL3P82987 1691 aa21.39■■□□□ 1.01
TMEM259-212ENST00000607316 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
TMEM259-212ENST00000607316 INO80Q9ULG1 1556 aaPredicted RBP21.37■■□□□ 1.01
TMEM259-212ENST00000607316 MADDQ8WXG6 1647 aa21.37■■□□□ 1.01
TMEM259-212ENST00000607316 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
TMEM259-212ENST00000607316 SPAG9O60271 1321 aaKnown RBP21.35■■□□□ 1.01
TMEM259-212ENST00000607316 MLECQ14165 292 aa21.34■■□□□ 1.01
TMEM259-212ENST00000607316 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
TMEM259-212ENST00000607316 REREQ9P2R6 1566 aa21.31■■□□□ 1
TMEM259-212ENST00000607316 RIMS1Q86UR5 1692 aaKnown RBP21.3■■□□□ 1
TMEM259-212ENST00000607316 MIA2Q96PC5 1412 aa21.29■■□□□ 1
TMEM259-212ENST00000607316 ARHGEF5Q12774 1597 aa21.28■■□□□ 1
TMEM259-212ENST00000607316 PTPRMP28827 1452 aa21.28■■□□□ 1
TMEM259-212ENST00000607316 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
TMEM259-212ENST00000607316 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
TMEM259-212ENST00000607316 FGD6Q6ZV73 1430 aa21.26■□□□□ 0.99
TMEM259-212ENST00000607316 FER1L4A9Z1Z3 1794 aa21.25■□□□□ 0.99
TMEM259-212ENST00000607316 AGLP35573 1532 aa21.24■□□□□ 0.99
TMEM259-212ENST00000607316 PLXNC1O60486 1568 aa21.24■□□□□ 0.99
TMEM259-212ENST00000607316 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
TMEM259-212ENST00000607316 A2MP01023 1474 aa21.23■□□□□ 0.99
TMEM259-212ENST00000607316 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
TMEM259-212ENST00000607316 PLPPR3Q6T4P5 718 aa21.21■□□□□ 0.99
TMEM259-212ENST00000607316 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
TMEM259-212ENST00000607316 RSPH4AQ5TD94 716 aa21.18■□□□□ 0.98
TMEM259-212ENST00000607316 MAST1Q9Y2H9 1570 aa21.18■□□□□ 0.98
TMEM259-212ENST00000607316 CROCC2H7BZ55 1655 aa21.18■□□□□ 0.98
TMEM259-212ENST00000607316 ABCC5O15440 1437 aa21.17■□□□□ 0.98
TMEM259-212ENST00000607316 DNMT1P26358 1616 aaKnown RBP21.15■□□□□ 0.98
TMEM259-212ENST00000607316 TSPY4P0CV99 314 aa21.15■□□□□ 0.98
TMEM259-212ENST00000607316 TSPY10P0CW01 314 aa21.15■□□□□ 0.98
TMEM259-212ENST00000607316 DAPK1P53355 1430 aa21.14■□□□□ 0.98
TMEM259-212ENST00000607316 DHX29Q7Z478 1369 aaKnown RBP21.13■□□□□ 0.97
TMEM259-212ENST00000607316 CEBPAP49715 358 aaPredicted RBP21.12■□□□□ 0.97
TMEM259-212ENST00000607316 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
TMEM259-212ENST00000607316 SHANK2Q9UPX8 1470 aa21.11■□□□□ 0.97
TMEM259-212ENST00000607316 GGT6Q6P531 493 aa21.09■□□□□ 0.97
TMEM259-212ENST00000607316 C3P01024 1663 aa21.08■□□□□ 0.96
TMEM259-212ENST00000607316 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
TMEM259-212ENST00000607316 CLTCQ00610 1675 aaKnown RBP21.07■□□□□ 0.96
TMEM259-212ENST00000607316 KIF3BO15066 747 aa21.06■□□□□ 0.96
TMEM259-212ENST00000607316 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
TMEM259-212ENST00000607316 ESF1Q9H501 851 aaKnown RBP21.03■□□□□ 0.96
TMEM259-212ENST00000607316 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
TMEM259-212ENST00000607316 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
TMEM259-212ENST00000607316 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
TMEM259-212ENST00000607316 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
TMEM259-212ENST00000607316 MROH2AA6NES4 1674 aa21.02■□□□□ 0.95
TMEM259-212ENST00000607316 CNTLNQ9NXG0 1405 aa21.01■□□□□ 0.95
TMEM259-212ENST00000607316 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
TMEM259-212ENST00000607316 MROH1Q8NDA8 1641 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms