RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
CTSA-215ENST00000607187 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
CTSA-215ENST00000607187 KIF14Q15058 1648 aa16.05■□□□□ 0.16
CTSA-215ENST00000607187 CFAP74Q9C0B2 1584 aa16.04■□□□□ 0.16
CTSA-215ENST00000607187 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
CTSA-215ENST00000607187 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
CTSA-215ENST00000607187 FANCAO15360 1455 aa16.03■□□□□ 0.16
CTSA-215ENST00000607187 PLCH2O75038 1416 aa16.02■□□□□ 0.15
CTSA-215ENST00000607187 AKNAQ7Z591 1439 aa16■□□□□ 0.15
CTSA-215ENST00000607187 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
CTSA-215ENST00000607187 FRMPD1Q5SYB0 1578 aa15.99■□□□□ 0.15
CTSA-215ENST00000607187 RAPGEF3O95398 923 aa15.98■□□□□ 0.15
CTSA-215ENST00000607187 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
CTSA-215ENST00000607187 MAPK8IP2Q13387 824 aaPredicted RBP15.97■□□□□ 0.15
CTSA-215ENST00000607187 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
CTSA-215ENST00000607187 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
CTSA-215ENST00000607187 DENND4BO75064 1496 aaPredicted RBP15.96■□□□□ 0.14
CTSA-215ENST00000607187 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
CTSA-215ENST00000607187 CDC42BPAQ5VT25 1732 aa15.94■□□□□ 0.14
CTSA-215ENST00000607187 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
CTSA-215ENST00000607187 ADGRL1O94910 1474 aa15.93■□□□□ 0.14
CTSA-215ENST00000607187 ARHGAP5Q13017 1502 aa15.93■□□□□ 0.14
CTSA-215ENST00000607187 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
CTSA-215ENST00000607187 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
CTSA-215ENST00000607187 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
CTSA-215ENST00000607187 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
CTSA-215ENST00000607187 POGZQ7Z3K3 1410 aa15.89■□□□□ 0.13
CTSA-215ENST00000607187 MSH5O43196 834 aa15.89■□□□□ 0.13
CTSA-215ENST00000607187 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
CTSA-215ENST00000607187 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
CTSA-215ENST00000607187 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
CTSA-215ENST00000607187 MAGI2Q86UL8 1455 aa15.86■□□□□ 0.13
CTSA-215ENST00000607187 GPATCH8Q9UKJ3 1502 aaKnown RBP15.86■□□□□ 0.13
CTSA-215ENST00000607187 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
CTSA-215ENST00000607187 ABCC1P33527 1531 aa15.84■□□□□ 0.13
CTSA-215ENST00000607187 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
CTSA-215ENST00000607187 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
CTSA-215ENST00000607187 ITSN2Q9NZM3 1697 aa15.83■□□□□ 0.13
CTSA-215ENST00000607187 YEATS2Q9ULM3 1422 aa15.83■□□□□ 0.12
CTSA-215ENST00000607187 KDM5CP41229 1560 aa15.83■□□□□ 0.12
CTSA-215ENST00000607187 ARHGEF12Q9NZN5 1544 aa15.82■□□□□ 0.12
CTSA-215ENST00000607187 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
CTSA-215ENST00000607187 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
CTSA-215ENST00000607187 AFAP1Q8N556 730 aa15.81■□□□□ 0.12
CTSA-215ENST00000607187 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
CTSA-215ENST00000607187 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
CTSA-215ENST00000607187 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
CTSA-215ENST00000607187 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
CTSA-215ENST00000607187 SIGLEC1Q9BZZ2 1709 aa15.79■□□□□ 0.12
CTSA-215ENST00000607187 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
CTSA-215ENST00000607187 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
CTSA-215ENST00000607187 CFDP1Q9UEE9 299 aaPredicted RBP15.78■□□□□ 0.12
CTSA-215ENST00000607187 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
CTSA-215ENST00000607187 ZNF777Q9ULD5 760 aaPredicted RBP15.77■□□□□ 0.12
CTSA-215ENST00000607187 ATP10AO60312 1499 aa15.77■□□□□ 0.11
CTSA-215ENST00000607187 NCOA2Q15596 1464 aa15.77■□□□□ 0.11
CTSA-215ENST00000607187 MLH3Q9UHC1 1453 aa15.77■□□□□ 0.11
CTSA-215ENST00000607187 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.11
CTSA-215ENST00000607187 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
CTSA-215ENST00000607187 PLEKHH2Q8IVE3 1493 aa15.76■□□□□ 0.11
CTSA-215ENST00000607187 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
CTSA-215ENST00000607187 KIDINS220Q9ULH0 1771 aa15.75■□□□□ 0.11
CTSA-215ENST00000607187 C9orf84Q5VXU9 1444 aa15.74■□□□□ 0.11
CTSA-215ENST00000607187 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
CTSA-215ENST00000607187 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
CTSA-215ENST00000607187 HNRNPMP52272 730 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTSA-215ENST00000607187 KANK4Q5T7N3 995 aaPredicted RBP15.72■□□□□ 0.11
CTSA-215ENST00000607187 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
CTSA-215ENST00000607187 REREQ9P2R6 1566 aa15.71■□□□□ 0.11
CTSA-215ENST00000607187 MYT1LQ9UL68 1186 aa15.71■□□□□ 0.11
CTSA-215ENST00000607187 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
CTSA-215ENST00000607187 PTPRMP28827 1452 aa15.69■□□□□ 0.1
CTSA-215ENST00000607187 MBD5Q9P267 1494 aa15.69■□□□□ 0.1
CTSA-215ENST00000607187 APLP2Q06481 763 aa15.68■□□□□ 0.1
CTSA-215ENST00000607187 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
CTSA-215ENST00000607187 FER1L4A9Z1Z3 1794 aa15.67■□□□□ 0.1
CTSA-215ENST00000607187 RIMS1Q86UR5 1692 aaKnown RBP15.67■□□□□ 0.1
CTSA-215ENST00000607187 INO80Q9ULG1 1556 aaPredicted RBP15.67■□□□□ 0.1
CTSA-215ENST00000607187 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
CTSA-215ENST00000607187 ATP7AQ04656 1500 aa15.66■□□□□ 0.1
CTSA-215ENST00000607187 AGLP35573 1532 aa15.65■□□□□ 0.1
CTSA-215ENST00000607187 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
CTSA-215ENST00000607187 MLECQ14165 292 aa15.64■□□□□ 0.09
CTSA-215ENST00000607187 MYOM3Q5VTT5 1437 aa15.63■□□□□ 0.09
CTSA-215ENST00000607187 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
CTSA-215ENST00000607187 RSPH4AQ5TD94 716 aa15.62■□□□□ 0.09
CTSA-215ENST00000607187 CCDC141Q6ZP82 1450 aa15.62■□□□□ 0.09
CTSA-215ENST00000607187 ARHGEF5Q12774 1597 aa15.62■□□□□ 0.09
CTSA-215ENST00000607187 ADGBQ8N7X0 1667 aa15.61■□□□□ 0.09
CTSA-215ENST00000607187 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
CTSA-215ENST00000607187 FKBP8Q14318 412 aa15.6■□□□□ 0.09
CTSA-215ENST00000607187 PLXNC1O60486 1568 aa15.6■□□□□ 0.09
CTSA-215ENST00000607187 A2MP01023 1474 aa15.59■□□□□ 0.09
CTSA-215ENST00000607187 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
CTSA-215ENST00000607187 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
CTSA-215ENST00000607187 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
CTSA-215ENST00000607187 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
CTSA-215ENST00000607187 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
CTSA-215ENST00000607187 SETD1BQ9UPS6 1966 aaKnown RBP15.54■□□□□ 0.08
CTSA-215ENST00000607187 MAST1Q9Y2H9 1570 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms