RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 ANP32EQ9BTT0 268 aa9.99□□□□□ -0.81
CDC40-207ENST00000606893 EFCAB2Q5VUJ9 269 aa9.98□□□□□ -0.81
CDC40-207ENST00000606893 TSPOAP1O95153 1857 aa9.98□□□□□ -0.81
CDC40-207ENST00000606893 DDX10Q13206 875 aaKnown RBP9.98□□□□□ -0.81
CDC40-207ENST00000606893 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
CDC40-207ENST00000606893 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
CDC40-207ENST00000606893 LRRC9Q6ZRR7 1453 aa9.98□□□□□ -0.81
CDC40-207ENST00000606893 MAGI3Q5TCQ9 1506 aa9.97□□□□□ -0.81
CDC40-207ENST00000606893 RAPGEF6Q8TEU7 1601 aa9.97□□□□□ -0.81
CDC40-207ENST00000606893 NCOA2Q15596 1464 aa9.96□□□□□ -0.81
CDC40-207ENST00000606893 SAMD9Q5K651 1589 aa9.96□□□□□ -0.81
CDC40-207ENST00000606893 FYCO1Q9BQS8 1478 aa9.96□□□□□ -0.82
CDC40-207ENST00000606893 IRX6P78412 446 aaPredicted RBP9.96□□□□□ -0.82
CDC40-207ENST00000606893 CD109Q6YHK3 1445 aa9.95□□□□□ -0.82
CDC40-207ENST00000606893 ABCC2Q92887 1545 aa9.94□□□□□ -0.82
CDC40-207ENST00000606893 CCDC18Q5T9S5 1454 aa9.94□□□□□ -0.82
CDC40-207ENST00000606893 ADCY10Q96PN6 1610 aa9.94□□□□□ -0.82
CDC40-207ENST00000606893 TROQ12816 1431 aaPredicted RBP9.93□□□□□ -0.82
CDC40-207ENST00000606893 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
CDC40-207ENST00000606893 TIAM1Q13009 1591 aa9.93□□□□□ -0.82
CDC40-207ENST00000606893 KIF3BO15066 747 aa9.92□□□□□ -0.82
CDC40-207ENST00000606893 ZNF326Q5BKZ1 582 aaKnown RBP9.92□□□□□ -0.82
CDC40-207ENST00000606893 ARHGAP5Q13017 1502 aa9.92□□□□□ -0.82
CDC40-207ENST00000606893 KIF14Q15058 1648 aa9.92□□□□□ -0.82
CDC40-207ENST00000606893 HECW1Q76N89 1606 aa9.92□□□□□ -0.82
CDC40-207ENST00000606893 SCAPERQ9BY12 1400 aa9.91□□□□□ -0.82
CDC40-207ENST00000606893 SPAG9O60271 1321 aaKnown RBP9.91□□□□□ -0.82
CDC40-207ENST00000606893 AEBP2Q6ZN18 517 aaPredicted RBP9.9□□□□□ -0.82
CDC40-207ENST00000606893 WDR7Q9Y4E6 1490 aa9.89□□□□□ -0.83
CDC40-207ENST00000606893 ABCA8O94911 1581 aa9.89□□□□□ -0.83
CDC40-207ENST00000606893 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
CDC40-207ENST00000606893 SHROOM2Q13796 1616 aa9.89□□□□□ -0.83
CDC40-207ENST00000606893 LRRIQ1Q96JM4 1722 aa9.88□□□□□ -0.83
CDC40-207ENST00000606893 ZCCHC11Q5TAX3 1644 aaKnown RBP9.88□□□□□ -0.83
CDC40-207ENST00000606893 RGL3Q3MIN7 710 aa9.88□□□□□ -0.83
CDC40-207ENST00000606893 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
CDC40-207ENST00000606893 CEBPAP49715 358 aaPredicted RBP9.87□□□□□ -0.83
CDC40-207ENST00000606893 FGD6Q6ZV73 1430 aa9.87□□□□□ -0.83
CDC40-207ENST00000606893 MAP3K1Q13233 1512 aa9.86□□□□□ -0.83
CDC40-207ENST00000606893 MYOM3Q5VTT5 1437 aa9.86□□□□□ -0.83
CDC40-207ENST00000606893 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
CDC40-207ENST00000606893 GPATCH8Q9UKJ3 1502 aaKnown RBP9.85□□□□□ -0.83
CDC40-207ENST00000606893 FANCAO15360 1455 aa9.85□□□□□ -0.83
CDC40-207ENST00000606893 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
CDC40-207ENST00000606893 KDM5BQ9UGL1 1544 aa9.84□□□□□ -0.83
CDC40-207ENST00000606893 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
CDC40-207ENST00000606893 PTPRKQ15262 1439 aa9.84□□□□□ -0.83
CDC40-207ENST00000606893 FKBP8Q14318 412 aa9.84□□□□□ -0.83
CDC40-207ENST00000606893 TTC37Q6PGP7 1564 aa9.83□□□□□ -0.84
CDC40-207ENST00000606893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDC40-207ENST00000606893 ADGRL1O94910 1474 aa9.82□□□□□ -0.84
CDC40-207ENST00000606893 EHBP1L1Q8N3D4 1523 aa9.81□□□□□ -0.84
CDC40-207ENST00000606893 AKNAQ7Z591 1439 aa9.81□□□□□ -0.84
CDC40-207ENST00000606893 RAB3GAP2Q9H2M9 1393 aa9.8□□□□□ -0.84
CDC40-207ENST00000606893 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
CDC40-207ENST00000606893 RRBP1Q9P2E9 1410 aaKnown RBP9.8□□□□□ -0.84
CDC40-207ENST00000606893 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 SUPT6HQ7KZ85 1726 aaKnown RBP9.79□□□□□ -0.84
CDC40-207ENST00000606893 WASHC2CQ9Y4E1 1318 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 PKD2Q13563 968 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 STAG3Q9UJ98 1225 aa9.79□□□□□ -0.84
CDC40-207ENST00000606893 NUP155O75694 1391 aa9.78□□□□□ -0.84
CDC40-207ENST00000606893 PLCH2O75038 1416 aa9.78□□□□□ -0.84
CDC40-207ENST00000606893 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
CDC40-207ENST00000606893 KIF15Q9NS87 1388 aa9.78□□□□□ -0.84
CDC40-207ENST00000606893 COL17A1Q9UMD9 1497 aaPredicted RBP9.78□□□□□ -0.84
CDC40-207ENST00000606893 YEATS2Q9ULM3 1422 aa9.77□□□□□ -0.85
CDC40-207ENST00000606893 ABCC5O15440 1437 aa9.77□□□□□ -0.85
CDC40-207ENST00000606893 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
CDC40-207ENST00000606893 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
CDC40-207ENST00000606893 UHRF1BP1LA0JNW5 1464 aa9.76□□□□□ -0.85
CDC40-207ENST00000606893 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
CDC40-207ENST00000606893 ABCC10Q5T3U5 1492 aa9.76□□□□□ -0.85
CDC40-207ENST00000606893 MIA2Q96PC5 1412 aa9.76□□□□□ -0.85
CDC40-207ENST00000606893 CFAP65Q6ZU64 1925 aaKnown RBP9.75□□□□□ -0.85
CDC40-207ENST00000606893 TSHZ2Q9NRE2 1034 aa9.75□□□□□ -0.85
CDC40-207ENST00000606893 ANKRD30AQ9BXX3 1397 aa9.75□□□□□ -0.85
CDC40-207ENST00000606893 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
CDC40-207ENST00000606893 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
CDC40-207ENST00000606893 MPHOSPH9Q99550 1183 aa9.74□□□□□ -0.85
CDC40-207ENST00000606893 SUPT16HQ9Y5B9 1047 aaKnown RBP9.74□□□□□ -0.85
CDC40-207ENST00000606893 DAPK1P53355 1430 aa9.74□□□□□ -0.85
CDC40-207ENST00000606893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDC40-207ENST00000606893 PLEKHH2Q8IVE3 1493 aa9.72□□□□□ -0.85
CDC40-207ENST00000606893 CFAP43Q8NDM7 1665 aa9.72□□□□□ -0.85
CDC40-207ENST00000606893 DENND4BO75064 1496 aaPredicted RBP9.72□□□□□ -0.85
CDC40-207ENST00000606893 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
CDC40-207ENST00000606893 FAM9BQ8IZU0 186 aa9.72□□□□□ -0.85
CDC40-207ENST00000606893 NEFLP07196 543 aa9.71□□□□□ -0.86
CDC40-207ENST00000606893 ANKRD50Q9ULJ7 1429 aa9.7□□□□□ -0.86
CDC40-207ENST00000606893 HSPA2P54652 639 aa9.7□□□□□ -0.86
CDC40-207ENST00000606893 HNRNPUQ00839 825 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDC40-207ENST00000606893 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
CDC40-207ENST00000606893 CDC42BPAQ5VT25 1732 aa9.69□□□□□ -0.86
CDC40-207ENST00000606893 SAMD9LQ8IVG5 1584 aa9.69□□□□□ -0.86
CDC40-207ENST00000606893 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
CDC40-207ENST00000606893 SAFB2Q14151 953 aaKnown RBP eCLIP9.68□□□□□ -0.86
CDC40-207ENST00000606893 CDC42BPBQ9Y5S2 1711 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms