RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 RNF25Q96BH1 459 aaPredicted RBP8.29□□□□□ -1.08
IGHV3-29-201ENST00000604817 MS4A4AQ96JQ5 239 aa8.26□□□□□ -1.09
IGHV3-29-201ENST00000604817 NLRP6P59044 892 aa8.25□□□□□ -1.09
IGHV3-29-201ENST00000604817 TMEM92Q6UXU6 159 aa8.25□□□□□ -1.09
IGHV3-29-201ENST00000604817 PHF8Q9UPP1 1060 aa8.25□□□□□ -1.09
IGHV3-29-201ENST00000604817 VARS2Q5ST30 1063 aaKnown RBP8.23□□□□□ -1.09
IGHV3-29-201ENST00000604817 GPR153Q6NV75 609 aa8.2□□□□□ -1.1
IGHV3-29-201ENST00000604817 BCL11BQ9C0K0 894 aaPredicted RBP8.2□□□□□ -1.1
IGHV3-29-201ENST00000604817 ZNF687Q8N1G0 1237 aa8.19□□□□□ -1.1
IGHV3-29-201ENST00000604817 FBXO22Q8NEZ5 403 aa8.18□□□□□ -1.1
IGHV3-29-201ENST00000604817 STK24Q9Y6E0 443 aa8.18□□□□□ -1.1
IGHV3-29-201ENST00000604817 PTGER2P43116 358 aa8.17□□□□□ -1.1
IGHV3-29-201ENST00000604817 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
IGHV3-29-201ENST00000604817 STK25O00506 426 aa8.15□□□□□ -1.1
IGHV3-29-201ENST00000604817 ARSIQ5FYB1 569 aa8.14□□□□□ -1.11
IGHV3-29-201ENST00000604817 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
IGHV3-29-201ENST00000604817 ECM2O94769 699 aaPredicted RBP8.13□□□□□ -1.11
IGHV3-29-201ENST00000604817 MFRPQ9BY79 579 aa8.13□□□□□ -1.11
IGHV3-29-201ENST00000604817 ZNF316A6NFI3 1004 aaPredicted RBP8.12□□□□□ -1.11
IGHV3-29-201ENST00000604817 KIF3CO14782 793 aa8.1□□□□□ -1.11
IGHV3-29-201ENST00000604817 C2orf72A6NCS6 295 aa8.08□□□□□ -1.12
IGHV3-29-201ENST00000604817 SLC34A2O95436 690 aa8.08□□□□□ -1.12
IGHV3-29-201ENST00000604817 PBX2P40425 430 aa8.07□□□□□ -1.12
IGHV3-29-201ENST00000604817 TMC2Q8TDI7 906 aa8.07□□□□□ -1.12
IGHV3-29-201ENST00000604817 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
IGHV3-29-201ENST00000604817 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
IGHV3-29-201ENST00000604817 ANKRD13DQ6ZTN6 518 aa8.05□□□□□ -1.12
IGHV3-29-201ENST00000604817 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
IGHV3-29-201ENST00000604817 RGL2O15211 777 aa8.03□□□□□ -1.12
IGHV3-29-201ENST00000604817 NUDT7P0C024 238 aa8.03□□□□□ -1.12
IGHV3-29-201ENST00000604817 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
IGHV3-29-201ENST00000604817 PKD2Q13563 968 aa8.03□□□□□ -1.12
IGHV3-29-201ENST00000604817 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
IGHV3-29-201ENST00000604817 PSDA5PKW4 1024 aaPredicted RBP8.02□□□□□ -1.13
IGHV3-29-201ENST00000604817 LHX6Q9UPM6 363 aa8□□□□□ -1.13
IGHV3-29-201ENST00000604817 DCAF8L2P0C7V8 631 aa7.95□□□□□ -1.14
IGHV3-29-201ENST00000604817 PTCD2Q8WV60 388 aaKnown RBP7.95□□□□□ -1.14
IGHV3-29-201ENST00000604817 BCANQ96GW7 911 aa7.95□□□□□ -1.14
IGHV3-29-201ENST00000604817 ARHGAP33O14559 1287 aa7.94□□□□□ -1.14
IGHV3-29-201ENST00000604817 PPP1R37O75864 691 aa7.94□□□□□ -1.14
IGHV3-29-201ENST00000604817 FOXK1P85037 733 aa7.93□□□□□ -1.14
IGHV3-29-201ENST00000604817 POTEEQ6S8J3 1075 aa7.93□□□□□ -1.14
IGHV3-29-201ENST00000604817 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
IGHV3-29-201ENST00000604817 AXIN2Q9Y2T1 843 aa7.93□□□□□ -1.14
IGHV3-29-201ENST00000604817 TBC1D12O60347 775 aa7.92□□□□□ -1.14
IGHV3-29-201ENST00000604817 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
IGHV3-29-201ENST00000604817 TK2O00142 265 aa7.91□□□□□ -1.14
IGHV3-29-201ENST00000604817 HAP1P54257 671 aaPredicted RBP7.91□□□□□ -1.14
IGHV3-29-201ENST00000604817 ADGRD1Q6QNK2 874 aa7.91□□□□□ -1.14
IGHV3-29-201ENST00000604817 PLPP6Q8IY26 295 aa7.91□□□□□ -1.14
IGHV3-29-201ENST00000604817 HCSTQ9UBK5 93 aa7.91□□□□□ -1.14
IGHV3-29-201ENST00000604817 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.14
IGHV3-29-201ENST00000604817 PPP4R3BQ5MIZ7 849 aa7.9□□□□□ -1.14
IGHV3-29-201ENST00000604817 RYDENQ9NUL5 291 aaKnown RBP7.89□□□□□ -1.15
IGHV3-29-201ENST00000604817 KCNH8Q96L42 1107 aa7.87□□□□□ -1.15
IGHV3-29-201ENST00000604817 PLA2G2EQ9NZK7 142 aa7.86□□□□□ -1.15
IGHV3-29-201ENST00000604817 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.86□□□□□ -1.15
IGHV3-29-201ENST00000604817 DSG2Q14126 1118 aa7.85□□□□□ -1.15
IGHV3-29-201ENST00000604817 BBXQ8WY36 941 aaPredicted RBP7.85□□□□□ -1.15
IGHV3-29-201ENST00000604817 STAC3Q96MF2 364 aa7.85□□□□□ -1.15
IGHV3-29-201ENST00000604817 DNAJC5Q9H3Z4 198 aa7.85□□□□□ -1.15
IGHV3-29-201ENST00000604817 HRO43593 1189 aa7.84□□□□□ -1.15
IGHV3-29-201ENST00000604817 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
IGHV3-29-201ENST00000604817 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
IGHV3-29-201ENST00000604817 PSEN2P49810 448 aa7.82□□□□□ -1.16
IGHV3-29-201ENST00000604817 DMRTA1Q5VZB9 504 aa7.82□□□□□ -1.16
IGHV3-29-201ENST00000604817 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
IGHV3-29-201ENST00000604817 TPRNQ4KMQ1 711 aa7.79□□□□□ -1.16
IGHV3-29-201ENST00000604817 KCNK17Q96T54 332 aa7.78□□□□□ -1.16
IGHV3-29-201ENST00000604817 SLC4A5Q9BY07 1137 aa7.78□□□□□ -1.16
IGHV3-29-201ENST00000604817 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
IGHV3-29-201ENST00000604817 KCTD12Q96CX2 325 aaKnown RBP7.77□□□□□ -1.17
IGHV3-29-201ENST00000604817 PDE4AP27815 886 aa7.76□□□□□ -1.17
IGHV3-29-201ENST00000604817 PPP1R15BQ5SWA1 713 aa7.76□□□□□ -1.17
IGHV3-29-201ENST00000604817 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
IGHV3-29-201ENST00000604817 BCL2L12Q9HB09 334 aa7.76□□□□□ -1.17
IGHV3-29-201ENST00000604817 NKX1-1Q15270 411 aaPredicted RBP7.75□□□□□ -1.17
IGHV3-29-201ENST00000604817 UPF1Q92900 1129 aaKnown RBP eCLIP7.75□□□□□ -1.17
IGHV3-29-201ENST00000604817 VPS9D1Q9Y2B5 631 aa7.75□□□□□ -1.17
IGHV3-29-201ENST00000604817 PTPREP23469 700 aa7.73□□□□□ -1.17
IGHV3-29-201ENST00000604817 FOSBP53539 338 aa7.73□□□□□ -1.17
IGHV3-29-201ENST00000604817 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
IGHV3-29-201ENST00000604817 JPH4Q96JJ6 628 aa7.72□□□□□ -1.17
IGHV3-29-201ENST00000604817 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
IGHV3-29-201ENST00000604817 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
IGHV3-29-201ENST00000604817 KDM2AQ9Y2K7 1162 aa7.7□□□□□ -1.18
IGHV3-29-201ENST00000604817 GOLGA8CPA6NN73 597 aa7.69□□□□□ -1.18
IGHV3-29-201ENST00000604817 IFFO2Q5TF58 517 aa7.69□□□□□ -1.18
IGHV3-29-201ENST00000604817 ZBED2Q9BTP6 218 aa7.69□□□□□ -1.18
IGHV3-29-201ENST00000604817 NCKAP5LQ9HCH0 1330 aa7.69□□□□□ -1.18
IGHV3-29-201ENST00000604817 BHMG1C9JSJ3 638 aaPredicted RBP7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 EVI5O60447 810 aa7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 RGS20O76081 388 aa7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 PTPN5P54829 565 aa7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 MRPL50Q8N5N7 158 aaKnown RBP7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 ZDHHC16Q969W1 377 aa7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 DDX27Q96GQ7 796 aaKnown RBP7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 NBPF3Q9H094 633 aa7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 DAXXQ9UER7 740 aaPredicted RBP7.68□□□□□ -1.18
IGHV3-29-201ENST00000604817 THSD4Q6ZMP0 1018 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms