RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 ILDR1Q86SU0 546 aaPredicted RBP9.54□□□□□ -0.88
SRGAP2-211ENST00000604423 CLSPNQ9HAW4 1339 aa9.53□□□□□ -0.88
SRGAP2-211ENST00000604423 SOX12O15370 315 aa9.53□□□□□ -0.88
SRGAP2-211ENST00000604423 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
SRGAP2-211ENST00000604423 G3V3G9 751 aa9.51□□□□□ -0.89
SRGAP2-211ENST00000604423 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
SRGAP2-211ENST00000604423 SLAIN1Q8ND83 568 aa9.51□□□□□ -0.89
SRGAP2-211ENST00000604423 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
SRGAP2-211ENST00000604423 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
SRGAP2-211ENST00000604423 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
SRGAP2-211ENST00000604423 SCRIBQ14160 1630 aa9.5□□□□□ -0.89
SRGAP2-211ENST00000604423 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
SRGAP2-211ENST00000604423 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.49□□□□□ -0.89
SRGAP2-211ENST00000604423 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
SRGAP2-211ENST00000604423 NLRP6P59044 892 aa9.48□□□□□ -0.89
SRGAP2-211ENST00000604423 FBXO22Q8NEZ5 403 aa9.48□□□□□ -0.89
SRGAP2-211ENST00000604423 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.89
SRGAP2-211ENST00000604423 ANP32EQ9BTT0 268 aa9.46□□□□□ -0.89
SRGAP2-211ENST00000604423 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
SRGAP2-211ENST00000604423 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
SRGAP2-211ENST00000604423 NKX1-1Q15270 411 aaPredicted RBP9.42□□□□□ -0.9
SRGAP2-211ENST00000604423 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
SRGAP2-211ENST00000604423 CEP162Q5TB80 1403 aa9.41□□□□□ -0.9
SRGAP2-211ENST00000604423 SUPT16HQ9Y5B9 1047 aaKnown RBP9.4□□□□□ -0.9
SRGAP2-211ENST00000604423 PPP1R37O75864 691 aa9.39□□□□□ -0.91
SRGAP2-211ENST00000604423 TMEM121BQ9BXQ6 578 aaPredicted RBP9.39□□□□□ -0.91
SRGAP2-211ENST00000604423 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
SRGAP2-211ENST00000604423 TSHZ2Q9NRE2 1034 aa9.35□□□□□ -0.91
SRGAP2-211ENST00000604423 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
SRGAP2-211ENST00000604423 WIZO95785 1651 aa9.33□□□□□ -0.92
SRGAP2-211ENST00000604423 LCE2DQ5TA82 110 aaPredicted RBP9.33□□□□□ -0.92
SRGAP2-211ENST00000604423 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
SRGAP2-211ENST00000604423 BAZ1AQ9NRL2 1556 aaPredicted RBP9.33□□□□□ -0.92
SRGAP2-211ENST00000604423 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
SRGAP2-211ENST00000604423 ST18O60284 1047 aa9.3□□□□□ -0.92
SRGAP2-211ENST00000604423 DNAJC5Q9H3Z4 198 aa9.3□□□□□ -0.92
SRGAP2-211ENST00000604423 POTEMA6NI47 508 aa9.28□□□□□ -0.92
SRGAP2-211ENST00000604423 EEA1Q15075 1411 aa9.28□□□□□ -0.92
SRGAP2-211ENST00000604423 SNPHO15079 494 aa9.27□□□□□ -0.92
SRGAP2-211ENST00000604423 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.92
SRGAP2-211ENST00000604423 POTEGQ6S5H5 508 aa9.27□□□□□ -0.92
SRGAP2-211ENST00000604423 ABCC8Q09428 1581 aa9.27□□□□□ -0.93
SRGAP2-211ENST00000604423 CECR2Q9BXF3 1484 aa9.27□□□□□ -0.93
SRGAP2-211ENST00000604423 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.93
SRGAP2-211ENST00000604423 GOLGA3Q08378 1498 aa9.26□□□□□ -0.93
SRGAP2-211ENST00000604423 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
SRGAP2-211ENST00000604423 CCDC88BA6NC98 1476 aa9.26□□□□□ -0.93
SRGAP2-211ENST00000604423 MARVELD3Q96A59 401 aa9.25□□□□□ -0.93
SRGAP2-211ENST00000604423 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
SRGAP2-211ENST00000604423 NACADO15069 1562 aa9.24□□□□□ -0.93
SRGAP2-211ENST00000604423 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
SRGAP2-211ENST00000604423 TMC2Q8TDI7 906 aa9.23□□□□□ -0.93
SRGAP2-211ENST00000604423 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
SRGAP2-211ENST00000604423 BBXQ8WY36 941 aaPredicted RBP9.21□□□□□ -0.93
SRGAP2-211ENST00000604423 SOGA1O94964 1423 aa9.21□□□□□ -0.93
SRGAP2-211ENST00000604423 KIF3CO14782 793 aa9.2□□□□□ -0.94
SRGAP2-211ENST00000604423 NEFLP07196 543 aa9.19□□□□□ -0.94
SRGAP2-211ENST00000604423 DOK7Q18PE1 504 aa9.19□□□□□ -0.94
SRGAP2-211ENST00000604423 BCANQ96GW7 911 aa9.19□□□□□ -0.94
SRGAP2-211ENST00000604423 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
SRGAP2-211ENST00000604423 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
SRGAP2-211ENST00000604423 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.17□□□□□ -0.94
SRGAP2-211ENST00000604423 EMP3P54852 163 aa9.16□□□□□ -0.94
SRGAP2-211ENST00000604423 VPS8Q8N3P4 1428 aa9.16□□□□□ -0.94
SRGAP2-211ENST00000604423 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 PAXIP1Q6ZW49 1069 aaPredicted RBP9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 ERICH6Q7L0X2 663 aa9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 KIF21BO75037 1637 aa9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 CLIP1P30622 1438 aa9.15□□□□□ -0.94
SRGAP2-211ENST00000604423 GPHNQ9NQX3 736 aaPredicted RBP9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 RBM19Q9Y4C8 960 aaKnown RBP9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 DSG2Q14126 1118 aa9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.95
SRGAP2-211ENST00000604423 SMARCA2P51531 1590 aa9.13□□□□□ -0.95
SRGAP2-211ENST00000604423 RUSC2Q8N2Y8 1516 aa9.13□□□□□ -0.95
SRGAP2-211ENST00000604423 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
SRGAP2-211ENST00000604423 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
SRGAP2-211ENST00000604423 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
SRGAP2-211ENST00000604423 PLPP6Q8IY26 295 aa9.12□□□□□ -0.95
SRGAP2-211ENST00000604423 HOXB1P14653 301 aaPredicted RBP9.11□□□□□ -0.95
SRGAP2-211ENST00000604423 FOXK1P85037 733 aa9.1□□□□□ -0.95
SRGAP2-211ENST00000604423 GPR153Q6NV75 609 aa9.1□□□□□ -0.95
SRGAP2-211ENST00000604423 CRISPLD2Q9H0B8 497 aa9.1□□□□□ -0.95
SRGAP2-211ENST00000604423 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
SRGAP2-211ENST00000604423 LARP6Q9BRS8 491 aaKnown RBP9.09□□□□□ -0.95
SRGAP2-211ENST00000604423 CDAN1Q8IWY9 1227 aa9.09□□□□□ -0.95
SRGAP2-211ENST00000604423 HS3ST6Q96QI5 342 aa9.09□□□□□ -0.95
SRGAP2-211ENST00000604423 MYT1LQ9UL68 1186 aa9.09□□□□□ -0.95
SRGAP2-211ENST00000604423 NUDT7P0C024 238 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 PDE4AP27815 886 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 ERBB3P21860 1342 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
SRGAP2-211ENST00000604423 ZSWIM6Q9HCJ5 1215 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms