RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ARHGAP5Q13017 1502 aa26.44■■□□□ 1.82
TUBE1-206ENST00000603722 ARID4BQ4LE39 1312 aaPredicted RBP26.44■■□□□ 1.82
TUBE1-206ENST00000603722 YEATS2Q9ULM3 1422 aa26.41■■□□□ 1.82
TUBE1-206ENST00000603722 ZFYVE16Q7Z3T8 1539 aa26.41■■□□□ 1.82
TUBE1-206ENST00000603722 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
TUBE1-206ENST00000603722 MAGI2Q86UL8 1455 aa26.39■■□□□ 1.82
TUBE1-206ENST00000603722 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
TUBE1-206ENST00000603722 PREX2Q70Z35 1606 aa26.32■■□□□ 1.8
TUBE1-206ENST00000603722 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
TUBE1-206ENST00000603722 BCORL1Q5H9F3 1711 aa26.32■■□□□ 1.8
TUBE1-206ENST00000603722 PTPRMP28827 1452 aa26.31■■□□□ 1.8
TUBE1-206ENST00000603722 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
TUBE1-206ENST00000603722 AFAP1Q8N556 730 aa26.29■■□□□ 1.8
TUBE1-206ENST00000603722 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
TUBE1-206ENST00000603722 ABCC1P33527 1531 aa26.27■■□□□ 1.8
TUBE1-206ENST00000603722 CDC42BPBQ9Y5S2 1711 aa26.27■■□□□ 1.8
TUBE1-206ENST00000603722 KDM5CP41229 1560 aa26.26■■□□□ 1.79
TUBE1-206ENST00000603722 MTUS2Q5JR59 1369 aa26.26■■□□□ 1.79
TUBE1-206ENST00000603722 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
TUBE1-206ENST00000603722 SIGLEC1Q9BZZ2 1709 aa26.25■■□□□ 1.79
TUBE1-206ENST00000603722 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
TUBE1-206ENST00000603722 ATP10AO60312 1499 aa26.24■■□□□ 1.79
TUBE1-206ENST00000603722 C9orf84Q5VXU9 1444 aa26.24■■□□□ 1.79
TUBE1-206ENST00000603722 TRAPPC8Q9Y2L5 1435 aa26.23■■□□□ 1.79
TUBE1-206ENST00000603722 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
TUBE1-206ENST00000603722 GPATCH8Q9UKJ3 1502 aaKnown RBP26.23■■□□□ 1.79
TUBE1-206ENST00000603722 MLECQ14165 292 aa26.22■■□□□ 1.79
TUBE1-206ENST00000603722 ZNF777Q9ULD5 760 aaPredicted RBP26.21■■□□□ 1.79
TUBE1-206ENST00000603722 CDC42BPAQ5VT25 1732 aa26.2■■□□□ 1.79
TUBE1-206ENST00000603722 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
TUBE1-206ENST00000603722 MLH3Q9UHC1 1453 aa26.17■■□□□ 1.78
TUBE1-206ENST00000603722 EHBP1L1Q8N3D4 1523 aa26.17■■□□□ 1.78
TUBE1-206ENST00000603722 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
TUBE1-206ENST00000603722 ITSN2Q9NZM3 1697 aa26.16■■□□□ 1.78
TUBE1-206ENST00000603722 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
TUBE1-206ENST00000603722 CFDP1Q9UEE9 299 aaPredicted RBP26.15■■□□□ 1.78
TUBE1-206ENST00000603722 DIP2CQ9Y2E4 1556 aa26.15■■□□□ 1.78
TUBE1-206ENST00000603722 SYCP2Q9BX26 1530 aa26.14■■□□□ 1.77
TUBE1-206ENST00000603722 PLPPR3Q6T4P5 718 aa26.13■■□□□ 1.77
TUBE1-206ENST00000603722 ABCA6Q8N139 1617 aa26.11■■□□□ 1.77
TUBE1-206ENST00000603722 HNRNPMP52272 730 aaKnown RBP eCLIP26.1■■□□□ 1.77
TUBE1-206ENST00000603722 VPS8Q8N3P4 1428 aa26.1■■□□□ 1.77
TUBE1-206ENST00000603722 TIAM1Q13009 1591 aa26.09■■□□□ 1.77
TUBE1-206ENST00000603722 REREQ9P2R6 1566 aa26.08■■□□□ 1.77
TUBE1-206ENST00000603722 PLEKHH2Q8IVE3 1493 aa26.08■■□□□ 1.77
TUBE1-206ENST00000603722 KIAA1107Q9UPP5 1409 aa26.07■■□□□ 1.76
TUBE1-206ENST00000603722 SPAG9O60271 1321 aaKnown RBP26.05■■□□□ 1.76
TUBE1-206ENST00000603722 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
TUBE1-206ENST00000603722 LMTK3Q96Q04 1460 aa26.04■■□□□ 1.76
TUBE1-206ENST00000603722 KIDINS220Q9ULH0 1771 aa26.02■■□□□ 1.76
TUBE1-206ENST00000603722 ZNF644Q9H582 1327 aaPredicted RBP26.02■■□□□ 1.76
TUBE1-206ENST00000603722 NCOA2Q15596 1464 aa26.02■■□□□ 1.76
TUBE1-206ENST00000603722 AGLP35573 1532 aa26■■□□□ 1.75
TUBE1-206ENST00000603722 ATP7AQ04656 1500 aa25.97■■□□□ 1.75
TUBE1-206ENST00000603722 SUPT6HQ7KZ85 1726 aaKnown RBP25.96■■□□□ 1.75
TUBE1-206ENST00000603722 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
TUBE1-206ENST00000603722 CEBPAP49715 358 aaPredicted RBP25.95■■□□□ 1.74
TUBE1-206ENST00000603722 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
TUBE1-206ENST00000603722 INO80Q9ULG1 1556 aaPredicted RBP25.95■■□□□ 1.74
TUBE1-206ENST00000603722 HSPA2P54652 639 aa25.91■■□□□ 1.74
TUBE1-206ENST00000603722 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
TUBE1-206ENST00000603722 CAMSAP2Q08AD1 1489 aa25.9■■□□□ 1.74
TUBE1-206ENST00000603722 A2MP01023 1474 aa25.89■■□□□ 1.73
TUBE1-206ENST00000603722 KANK4Q5T7N3 995 aaPredicted RBP25.88■■□□□ 1.73
TUBE1-206ENST00000603722 MAP3K1Q13233 1512 aa25.88■■□□□ 1.73
TUBE1-206ENST00000603722 PLXNC1O60486 1568 aa25.87■■□□□ 1.73
TUBE1-206ENST00000603722 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
TUBE1-206ENST00000603722 CNTLNQ9NXG0 1405 aa25.84■■□□□ 1.73
TUBE1-206ENST00000603722 RTEL1-TNFRSF6BF6WH68 1400 aa25.83■■□□□ 1.73
TUBE1-206ENST00000603722 UHRF1BP1Q6BDS2 1440 aa25.8■■□□□ 1.72
TUBE1-206ENST00000603722 PREX1Q8TCU6 1659 aa25.78■■□□□ 1.72
TUBE1-206ENST00000603722 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
TUBE1-206ENST00000603722 C3P01024 1663 aa25.77■■□□□ 1.72
TUBE1-206ENST00000603722 APLP2Q06481 763 aa25.77■■□□□ 1.72
TUBE1-206ENST00000603722 GGT6Q6P531 493 aa25.77■■□□□ 1.72
TUBE1-206ENST00000603722 ILDR1Q86SU0 546 aaPredicted RBP25.77■■□□□ 1.72
TUBE1-206ENST00000603722 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
TUBE1-206ENST00000603722 MYOM3Q5VTT5 1437 aa25.75■■□□□ 1.71
TUBE1-206ENST00000603722 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
TUBE1-206ENST00000603722 ARHGEF5Q12774 1597 aa25.74■■□□□ 1.71
TUBE1-206ENST00000603722 ZMYM3Q14202 1370 aa25.73■■□□□ 1.71
TUBE1-206ENST00000603722 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
TUBE1-206ENST00000603722 TSPY4P0CV99 314 aa25.71■■□□□ 1.71
TUBE1-206ENST00000603722 TSPY10P0CW01 314 aa25.71■■□□□ 1.71
TUBE1-206ENST00000603722 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
TUBE1-206ENST00000603722 NPATQ14207 1427 aa25.68■■□□□ 1.7
TUBE1-206ENST00000603722 CLTCQ00610 1675 aaKnown RBP25.68■■□□□ 1.7
TUBE1-206ENST00000603722 KIF3BO15066 747 aa25.66■■□□□ 1.7
TUBE1-206ENST00000603722 PPP6R1Q9UPN7 881 aa25.65■■□□□ 1.7
TUBE1-206ENST00000603722 MAST1Q9Y2H9 1570 aa25.62■■□□□ 1.69
TUBE1-206ENST00000603722 PTPRKQ15262 1439 aa25.62■■□□□ 1.69
TUBE1-206ENST00000603722 KDM5DQ9BY66 1539 aa25.58■■□□□ 1.68
TUBE1-206ENST00000603722 FGD6Q6ZV73 1430 aa25.56■■□□□ 1.68
TUBE1-206ENST00000603722 PTPN23Q9H3S7 1636 aa25.55■■□□□ 1.68
TUBE1-206ENST00000603722 FAM135AQ9P2D6 1515 aa25.54■■□□□ 1.68
TUBE1-206ENST00000603722 DMRT2Q9Y5R5 561 aa25.54■■□□□ 1.68
TUBE1-206ENST00000603722 WASHC2CQ9Y4E1 1318 aa25.54■■□□□ 1.68
TUBE1-206ENST00000603722 ABCC5O15440 1437 aa25.54■■□□□ 1.68
TUBE1-206ENST00000603722 SETD1BQ9UPS6 1966 aaKnown RBP25.53■■□□□ 1.68
TUBE1-206ENST00000603722 MYO3AQ8NEV4 1616 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms