RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 C2orf72A6NCS6 295 aa14.69□□□□□ -0.06
TUBE1-205ENST00000603651 ZNF710Q8N1W2 664 aa14.69□□□□□ -0.06
TUBE1-205ENST00000603651 HOXB3P14651 431 aaPredicted RBP14.68□□□□□ -0.06
TUBE1-205ENST00000603651 TMC2Q8TDI7 906 aa14.68□□□□□ -0.06
TUBE1-205ENST00000603651 GTPBP6O43824 516 aaPredicted RBP14.67□□□□□ -0.06
TUBE1-205ENST00000603651 DOK7Q18PE1 504 aa14.66□□□□□ -0.06
TUBE1-205ENST00000603651 EMP3P54852 163 aa14.6□□□□□ -0.07
TUBE1-205ENST00000603651 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
TUBE1-205ENST00000603651 KIF3CO14782 793 aa14.59□□□□□ -0.07
TUBE1-205ENST00000603651 RIMBP2O15034 1052 aa14.59□□□□□ -0.07
TUBE1-205ENST00000603651 FAM205CA6NFA0 338 aa14.53□□□□□ -0.08
TUBE1-205ENST00000603651 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
TUBE1-205ENST00000603651 ARSIQ5FYB1 569 aa14.51□□□□□ -0.09
TUBE1-205ENST00000603651 HOXB1P14653 301 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-205ENST00000603651 KHSRPQ92945 711 aaKnown RBP eCLIP14.5□□□□□ -0.09
TUBE1-205ENST00000603651 CFAP44Q96MT7 982 aa14.5□□□□□ -0.09
TUBE1-205ENST00000603651 CDAN1Q8IWY9 1227 aa14.49□□□□□ -0.09
TUBE1-205ENST00000603651 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
TUBE1-205ENST00000603651 PLPP6Q8IY26 295 aa14.48□□□□□ -0.09
TUBE1-205ENST00000603651 DSG2Q14126 1118 aa14.47□□□□□ -0.09
TUBE1-205ENST00000603651 PAXIP1Q6ZW49 1069 aaPredicted RBP14.47□□□□□ -0.09
TUBE1-205ENST00000603651 SPRYD3Q8NCJ5 442 aa14.46□□□□□ -0.09
TUBE1-205ENST00000603651 ERBB3P21860 1342 aa14.45□□□□□ -0.1
TUBE1-205ENST00000603651 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
TUBE1-205ENST00000603651 HS3ST6Q96QI5 342 aa14.45□□□□□ -0.1
TUBE1-205ENST00000603651 ZSWIM6Q9HCJ5 1215 aa14.45□□□□□ -0.1
TUBE1-205ENST00000603651 FOXK1P85037 733 aa14.43□□□□□ -0.1
TUBE1-205ENST00000603651 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
TUBE1-205ENST00000603651 POTEB3A0JP26 581 aa14.42□□□□□ -0.1
TUBE1-205ENST00000603651 PDE4AP27815 886 aa14.42□□□□□ -0.1
TUBE1-205ENST00000603651 POTEBQ6S5H4 581 aa14.42□□□□□ -0.1
TUBE1-205ENST00000603651 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
TUBE1-205ENST00000603651 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
TUBE1-205ENST00000603651 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
TUBE1-205ENST00000603651 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
TUBE1-205ENST00000603651 PCDH10Q9P2E7 1040 aa14.4□□□□□ -0.1
TUBE1-205ENST00000603651 PCDHGA4Q9Y5G9 962 aa14.4□□□□□ -0.1
TUBE1-205ENST00000603651 NUDT7P0C024 238 aa14.39□□□□□ -0.11
TUBE1-205ENST00000603651 PPP1R15BQ5SWA1 713 aa14.39□□□□□ -0.11
TUBE1-205ENST00000603651 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
TUBE1-205ENST00000603651 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.11
TUBE1-205ENST00000603651 SLC34A2O95436 690 aa14.35□□□□□ -0.11
TUBE1-205ENST00000603651 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
TUBE1-205ENST00000603651 ZNF316A6NFI3 1004 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-205ENST00000603651 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
TUBE1-205ENST00000603651 TBC1D12O60347 775 aa14.27□□□□□ -0.13
TUBE1-205ENST00000603651 LHX6Q9UPM6 363 aa14.27□□□□□ -0.13
TUBE1-205ENST00000603651 MFSD10Q14728 455 aa14.23□□□□□ -0.13
TUBE1-205ENST00000603651 OXER1Q8TDS5 423 aa14.22□□□□□ -0.13
TUBE1-205ENST00000603651 KRTAP3-3Q9BYR6 98 aa14.21□□□□□ -0.13
TUBE1-205ENST00000603651 KRTAP3-2Q9BYR7 98 aa14.21□□□□□ -0.13
TUBE1-205ENST00000603651 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
TUBE1-205ENST00000603651 MAP3K9P80192 1104 aa14.17□□□□□ -0.14
TUBE1-205ENST00000603651 EMILIN3Q9NT22 766 aa14.16□□□□□ -0.14
TUBE1-205ENST00000603651 TSHZ2Q9NRE2 1034 aa14.13□□□□□ -0.15
TUBE1-205ENST00000603651 KDM4FA0A1W2PPD8 638 aa14.12□□□□□ -0.15
TUBE1-205ENST00000603651 EVI5O60447 810 aa14.11□□□□□ -0.15
TUBE1-205ENST00000603651 WDR70Q9NW82 654 aa14.11□□□□□ -0.15
TUBE1-205ENST00000603651 AXIN2Q9Y2T1 843 aa14.11□□□□□ -0.15
TUBE1-205ENST00000603651 SPNS2Q8IVW8 549 aa14.1□□□□□ -0.15
TUBE1-205ENST00000603651 ANKRD13DQ6ZTN6 518 aa14.08□□□□□ -0.16
TUBE1-205ENST00000603651 PSDA5PKW4 1024 aaPredicted RBP14.07□□□□□ -0.16
TUBE1-205ENST00000603651 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
TUBE1-205ENST00000603651 ZNF454Q8N9F8 522 aa14.07□□□□□ -0.16
TUBE1-205ENST00000603651 DPYSL4O14531 572 aa14.06□□□□□ -0.16
TUBE1-205ENST00000603651 CAMK2BQ13554 666 aa14.03□□□□□ -0.16
TUBE1-205ENST00000603651 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
TUBE1-205ENST00000603651 LSM11P83369 360 aaKnown RBP eCLIP14□□□□□ -0.17
TUBE1-205ENST00000603651 PBX2P40425 430 aa13.99□□□□□ -0.17
TUBE1-205ENST00000603651 PSEN2P49810 448 aa13.99□□□□□ -0.17
TUBE1-205ENST00000603651 MMRN1Q13201 1228 aa13.99□□□□□ -0.17
TUBE1-205ENST00000603651 E2F4Q16254 413 aa13.99□□□□□ -0.17
TUBE1-205ENST00000603651 KCNK17Q96T54 332 aa13.98□□□□□ -0.17
TUBE1-205ENST00000603651 ARHGAP33O14559 1287 aa13.97□□□□□ -0.17
TUBE1-205ENST00000603651 FOSBP53539 338 aa13.97□□□□□ -0.17
TUBE1-205ENST00000603651 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
TUBE1-205ENST00000603651 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
TUBE1-205ENST00000603651 DMRTA1Q5VZB9 504 aa13.94□□□□□ -0.18
TUBE1-205ENST00000603651 KCNH8Q96L42 1107 aa13.94□□□□□ -0.18
TUBE1-205ENST00000603651 JPH4Q96JJ6 628 aa13.93□□□□□ -0.18
TUBE1-205ENST00000603651 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
TUBE1-205ENST00000603651 ZDHHC16Q969W1 377 aa13.91□□□□□ -0.18
TUBE1-205ENST00000603651 DDX12PQ92771 950 aa13.9□□□□□ -0.18
TUBE1-205ENST00000603651 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
TUBE1-205ENST00000603651 PCDHGA10Q9Y5H3 936 aa13.89□□□□□ -0.19
TUBE1-205ENST00000603651 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
TUBE1-205ENST00000603651 PTPREP23469 700 aa13.87□□□□□ -0.19
TUBE1-205ENST00000603651 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
TUBE1-205ENST00000603651 ADGRD1Q6QNK2 874 aa13.85□□□□□ -0.19
TUBE1-205ENST00000603651 RBM33Q96EV2 1170 aaKnown RBP13.85□□□□□ -0.19
TUBE1-205ENST00000603651 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
TUBE1-205ENST00000603651 RNF166Q96A37 237 aaPredicted RBP13.84□□□□□ -0.19
TUBE1-205ENST00000603651 PHF14O94880 888 aa13.83□□□□□ -0.2
TUBE1-205ENST00000603651 PDIA6Q15084 440 aa13.83□□□□□ -0.2
TUBE1-205ENST00000603651 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-205ENST00000603651 GRXCR2A6NFK2 248 aa13.81□□□□□ -0.2
TUBE1-205ENST00000603651 NBR1Q14596 966 aa13.8□□□□□ -0.2
TUBE1-205ENST00000603651 STAC3Q96MF2 364 aa13.8□□□□□ -0.2
TUBE1-205ENST00000603651 PTGER2P43116 358 aa13.79□□□□□ -0.2
TUBE1-205ENST00000603651 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms