RNA–Protein interactions for RNA: ENST00000603189.1

MRPS35P3-201, Transcript of mitochondrial ribosomal protein S35 pseudogene 3, humanhuman

BASIC

Gene MRPS35P3, Length 709 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P3-201ENST00000603189 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 EMP3P54852 163 aa12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
MRPS35P3-201ENST00000603189 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
MRPS35P3-201ENST00000603189 C2orf72A6NCS6 295 aa12.42□□□□□ -0.42
MRPS35P3-201ENST00000603189 GPR153Q6NV75 609 aa12.37□□□□□ -0.43
MRPS35P3-201ENST00000603189 TMC2Q8TDI7 906 aa12.37□□□□□ -0.43
MRPS35P3-201ENST00000603189 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
MRPS35P3-201ENST00000603189 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
MRPS35P3-201ENST00000603189 PLSCR2Q9NRY7 297 aa12.36□□□□□ -0.43
MRPS35P3-201ENST00000603189 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
MRPS35P3-201ENST00000603189 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
MRPS35P3-201ENST00000603189 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
MRPS35P3-201ENST00000603189 SLC34A2O95436 690 aa12.33□□□□□ -0.44
MRPS35P3-201ENST00000603189 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
MRPS35P3-201ENST00000603189 DCAF8L2P0C7V8 631 aa12.31□□□□□ -0.44
MRPS35P3-201ENST00000603189 RTN4Q9NQC3 1192 aaKnown RBP12.3□□□□□ -0.44
MRPS35P3-201ENST00000603189 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
MRPS35P3-201ENST00000603189 FOXK1P85037 733 aa12.29□□□□□ -0.44
MRPS35P3-201ENST00000603189 ERBB3P21860 1342 aa12.27□□□□□ -0.45
MRPS35P3-201ENST00000603189 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
MRPS35P3-201ENST00000603189 KRTAP3-3Q9BYR6 98 aa12.24□□□□□ -0.45
MRPS35P3-201ENST00000603189 KRTAP3-2Q9BYR7 98 aa12.24□□□□□ -0.45
MRPS35P3-201ENST00000603189 CRISPLD2Q9H0B8 497 aa12.24□□□□□ -0.45
MRPS35P3-201ENST00000603189 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
MRPS35P3-201ENST00000603189 PCDHGA4Q9Y5G9 962 aa12.22□□□□□ -0.45
MRPS35P3-201ENST00000603189 DSG2Q14126 1118 aa12.21□□□□□ -0.45
MRPS35P3-201ENST00000603189 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
MRPS35P3-201ENST00000603189 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
MRPS35P3-201ENST00000603189 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
MRPS35P3-201ENST00000603189 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
MRPS35P3-201ENST00000603189 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
MRPS35P3-201ENST00000603189 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
MRPS35P3-201ENST00000603189 NCKAP5LQ9HCH0 1330 aa12.16□□□□□ -0.46
MRPS35P3-201ENST00000603189 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
MRPS35P3-201ENST00000603189 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
MRPS35P3-201ENST00000603189 NUDT7P0C024 238 aa12.15□□□□□ -0.46
MRPS35P3-201ENST00000603189 PDE4AP27815 886 aa12.14□□□□□ -0.47
MRPS35P3-201ENST00000603189 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
MRPS35P3-201ENST00000603189 MFSD10Q14728 455 aa12.1□□□□□ -0.47
MRPS35P3-201ENST00000603189 MMRN1Q13201 1228 aa12.09□□□□□ -0.47
MRPS35P3-201ENST00000603189 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
MRPS35P3-201ENST00000603189 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
MRPS35P3-201ENST00000603189 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
MRPS35P3-201ENST00000603189 TBC1D12O60347 775 aa12.07□□□□□ -0.48
MRPS35P3-201ENST00000603189 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
MRPS35P3-201ENST00000603189 PBX2P40425 430 aa12.04□□□□□ -0.48
MRPS35P3-201ENST00000603189 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
MRPS35P3-201ENST00000603189 LARP6Q9BRS8 491 aaKnown RBP12.04□□□□□ -0.48
MRPS35P3-201ENST00000603189 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
MRPS35P3-201ENST00000603189 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
MRPS35P3-201ENST00000603189 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
MRPS35P3-201ENST00000603189 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
MRPS35P3-201ENST00000603189 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
MRPS35P3-201ENST00000603189 PTGER2P43116 358 aa11.96□□□□□ -0.49
MRPS35P3-201ENST00000603189 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
MRPS35P3-201ENST00000603189 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
MRPS35P3-201ENST00000603189 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
MRPS35P3-201ENST00000603189 EMILIN3Q9NT22 766 aa11.93□□□□□ -0.5
MRPS35P3-201ENST00000603189 ARHGAP33O14559 1287 aa11.92□□□□□ -0.5
MRPS35P3-201ENST00000603189 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
MRPS35P3-201ENST00000603189 EVI5O60447 810 aa11.88□□□□□ -0.51
MRPS35P3-201ENST00000603189 FOSBP53539 338 aa11.88□□□□□ -0.51
MRPS35P3-201ENST00000603189 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
MRPS35P3-201ENST00000603189 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
MRPS35P3-201ENST00000603189 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
MRPS35P3-201ENST00000603189 MYT1LQ9UL68 1186 aa11.87□□□□□ -0.51
MRPS35P3-201ENST00000603189 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
MRPS35P3-201ENST00000603189 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
MRPS35P3-201ENST00000603189 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
MRPS35P3-201ENST00000603189 TK2O00142 265 aa11.84□□□□□ -0.51
MRPS35P3-201ENST00000603189 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
MRPS35P3-201ENST00000603189 BCL2L12Q9HB09 334 aa11.84□□□□□ -0.51
MRPS35P3-201ENST00000603189 PSEN2P49810 448 aa11.82□□□□□ -0.52
MRPS35P3-201ENST00000603189 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
MRPS35P3-201ENST00000603189 DMRTA1Q5VZB9 504 aa11.8□□□□□ -0.52
MRPS35P3-201ENST00000603189 KCNH8Q96L42 1107 aa11.8□□□□□ -0.52
MRPS35P3-201ENST00000603189 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
MRPS35P3-201ENST00000603189 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
MRPS35P3-201ENST00000603189 HRO43593 1189 aa11.77□□□□□ -0.53
MRPS35P3-201ENST00000603189 DPYSL4O14531 572 aa11.76□□□□□ -0.53
MRPS35P3-201ENST00000603189 SLC4A5Q9BY07 1137 aa11.76□□□□□ -0.53
MRPS35P3-201ENST00000603189 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
MRPS35P3-201ENST00000603189 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
MRPS35P3-201ENST00000603189 PHF14O94880 888 aa11.74□□□□□ -0.53
MRPS35P3-201ENST00000603189 PTPREP23469 700 aa11.74□□□□□ -0.53
MRPS35P3-201ENST00000603189 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
MRPS35P3-201ENST00000603189 PDIA6Q15084 440 aa11.72□□□□□ -0.53
MRPS35P3-201ENST00000603189 E2F4Q16254 413 aa11.72□□□□□ -0.53
MRPS35P3-201ENST00000603189 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
MRPS35P3-201ENST00000603189 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
MRPS35P3-201ENST00000603189 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
MRPS35P3-201ENST00000603189 EPAS1Q99814 870 aa11.69□□□□□ -0.54
MRPS35P3-201ENST00000603189 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
MRPS35P3-201ENST00000603189 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
MRPS35P3-201ENST00000603189 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
MRPS35P3-201ENST00000603189 PPP1R3GB7ZBB8 358 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms