RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
AC004542.1-201ENST00000602955 TIE1P35590 1138 aa8.15□□□□□ -1.1
AC004542.1-201ENST00000602955 DAXXQ9UER7 740 aaPredicted RBP8.15□□□□□ -1.1
AC004542.1-201ENST00000602955 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
AC004542.1-201ENST00000602955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.11
AC004542.1-201ENST00000602955 TTLL13PA6NNM8 815 aa8.12□□□□□ -1.11
AC004542.1-201ENST00000602955 PDIA6Q15084 440 aa8.12□□□□□ -1.11
AC004542.1-201ENST00000602955 EMILIN3Q9NT22 766 aa8.12□□□□□ -1.11
AC004542.1-201ENST00000602955 DPYSL4O14531 572 aa8.11□□□□□ -1.11
AC004542.1-201ENST00000602955 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
AC004542.1-201ENST00000602955 KRI1Q8N9T8 703 aaKnown RBP8.11□□□□□ -1.11
AC004542.1-201ENST00000602955 C19orf67A6NJJ6 358 aa8.1□□□□□ -1.11
AC004542.1-201ENST00000602955 GPBP1L1Q9HC44 474 aaPredicted RBP8.1□□□□□ -1.11
AC004542.1-201ENST00000602955 DSG2Q14126 1118 aa8.09□□□□□ -1.11
AC004542.1-201ENST00000602955 TRIM66O15016 1216 aa8.08□□□□□ -1.12
AC004542.1-201ENST00000602955 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
AC004542.1-201ENST00000602955 BMP2KQ9NSY1 1161 aaPredicted RBP8.08□□□□□ -1.12
AC004542.1-201ENST00000602955 FOXK1P85037 733 aa8.07□□□□□ -1.12
AC004542.1-201ENST00000602955 MICALL2Q8IY33 904 aa8.07□□□□□ -1.12
AC004542.1-201ENST00000602955 GPR37O15354 613 aa8.06□□□□□ -1.12
AC004542.1-201ENST00000602955 TMC2Q8TDI7 906 aa8.06□□□□□ -1.12
AC004542.1-201ENST00000602955 PDE4DQ08499 809 aa8.05□□□□□ -1.12
AC004542.1-201ENST00000602955 DPY19L2Q6NUT2 758 aa8.05□□□□□ -1.12
AC004542.1-201ENST00000602955 TRIM35Q9UPQ4 493 aa8.05□□□□□ -1.12
AC004542.1-201ENST00000602955 IL27Q8NEV9 243 aa8.04□□□□□ -1.12
AC004542.1-201ENST00000602955 SUPT5HO00267 1087 aaKnown RBP8.03□□□□□ -1.12
AC004542.1-201ENST00000602955 PDCD7Q8N8D1 485 aaKnown RBP8.03□□□□□ -1.12
AC004542.1-201ENST00000602955 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
AC004542.1-201ENST00000602955 PLPP6Q8IY26 295 aa8.02□□□□□ -1.13
AC004542.1-201ENST00000602955 MINK1Q8N4C8 1332 aaPredicted RBP8.01□□□□□ -1.13
AC004542.1-201ENST00000602955 KIF3CO14782 793 aa8□□□□□ -1.13
AC004542.1-201ENST00000602955 MAP2K5Q13163 448 aa7.99□□□□□ -1.13
AC004542.1-201ENST00000602955 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
AC004542.1-201ENST00000602955 GALR2O43603 387 aaPredicted RBP7.98□□□□□ -1.13
AC004542.1-201ENST00000602955 BOLA1Q9Y3E2 137 aa7.98□□□□□ -1.13
AC004542.1-201ENST00000602955 CLCN6P51797 869 aa7.97□□□□□ -1.13
AC004542.1-201ENST00000602955 IRX5P78411 483 aaPredicted RBP7.97□□□□□ -1.13
AC004542.1-201ENST00000602955 IER5LQ5T953 404 aa7.97□□□□□ -1.13
AC004542.1-201ENST00000602955 OCEL1Q9H607 264 aa7.97□□□□□ -1.13
AC004542.1-201ENST00000602955 NUTM2FA1L443 756 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 GRXCR2A6NFK2 248 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 IRF6O14896 467 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 OSBPP22059 807 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 MAP3K9P80192 1104 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 AMHR2Q16671 573 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 CCDC102AQ96A19 550 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 FAM117AQ9C073 453 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 ZMYND15Q9H091 742 aa7.96□□□□□ -1.14
AC004542.1-201ENST00000602955 GNPATO15228 680 aa7.95□□□□□ -1.14
AC004542.1-201ENST00000602955 PTGER2P43116 358 aa7.95□□□□□ -1.14
AC004542.1-201ENST00000602955 HIC1Q14526 733 aa7.94□□□□□ -1.14
AC004542.1-201ENST00000602955 OXER1Q8TDS5 423 aa7.94□□□□□ -1.14
AC004542.1-201ENST00000602955 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
AC004542.1-201ENST00000602955 PLEKHG3A1L390 1219 aa7.93□□□□□ -1.14
AC004542.1-201ENST00000602955 G3V3G9 751 aa7.93□□□□□ -1.14
AC004542.1-201ENST00000602955 FCHSD2O94868 740 aa7.93□□□□□ -1.14
AC004542.1-201ENST00000602955 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
AC004542.1-201ENST00000602955 RSPH6AQ9H0K4 717 aa7.93□□□□□ -1.14
AC004542.1-201ENST00000602955 PARP9Q8IXQ6 854 aa7.92□□□□□ -1.14
AC004542.1-201ENST00000602955 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
AC004542.1-201ENST00000602955 ATMINO43313 823 aaPredicted RBP7.91□□□□□ -1.14
AC004542.1-201ENST00000602955 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
AC004542.1-201ENST00000602955 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.14
AC004542.1-201ENST00000602955 L3MBTL3Q96JM7 780 aaPredicted RBP7.9□□□□□ -1.14
AC004542.1-201ENST00000602955 PLCG2P16885 1265 aa7.89□□□□□ -1.15
AC004542.1-201ENST00000602955 TMEM92Q6UXU6 159 aa7.88□□□□□ -1.15
AC004542.1-201ENST00000602955 DDX12PQ92771 950 aa7.88□□□□□ -1.15
AC004542.1-201ENST00000602955 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
AC004542.1-201ENST00000602955 TBC1D12O60347 775 aa7.87□□□□□ -1.15
AC004542.1-201ENST00000602955 FECHP22830 423 aa7.87□□□□□ -1.15
AC004542.1-201ENST00000602955 PRIM1P49642 420 aaKnown RBP7.87□□□□□ -1.15
AC004542.1-201ENST00000602955 PTGDRQ13258 359 aa7.87□□□□□ -1.15
AC004542.1-201ENST00000602955 EVI5O60447 810 aa7.85□□□□□ -1.15
AC004542.1-201ENST00000602955 FLIIQ13045 1269 aa7.85□□□□□ -1.15
AC004542.1-201ENST00000602955 TTLL12Q14166 644 aaPredicted RBP7.85□□□□□ -1.15
AC004542.1-201ENST00000602955 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
AC004542.1-201ENST00000602955 HAX1O00165 279 aa7.82□□□□□ -1.16
AC004542.1-201ENST00000602955 EVX2Q03828 476 aa7.82□□□□□ -1.16
AC004542.1-201ENST00000602955 ANO8Q9HCE9 1232 aaPredicted RBP7.82□□□□□ -1.16
AC004542.1-201ENST00000602955 ONECUT3O60422 494 aaPredicted RBP7.81□□□□□ -1.16
AC004542.1-201ENST00000602955 UBTFP17480 764 aaKnown RBP7.81□□□□□ -1.16
AC004542.1-201ENST00000602955 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
AC004542.1-201ENST00000602955 SLC34A2O95436 690 aa7.8□□□□□ -1.16
AC004542.1-201ENST00000602955 MS4A1P11836 297 aa7.79□□□□□ -1.16
AC004542.1-201ENST00000602955 PCMTD1Q96MG8 357 aaPredicted RBP7.79□□□□□ -1.16
AC004542.1-201ENST00000602955 TMUB1Q9BVT8 246 aa7.79□□□□□ -1.16
AC004542.1-201ENST00000602955 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
AC004542.1-201ENST00000602955 EPAS1Q99814 870 aa7.78□□□□□ -1.16
AC004542.1-201ENST00000602955 C1orf115Q9H7X2 142 aa7.78□□□□□ -1.16
AC004542.1-201ENST00000602955 NPDC1Q9NQX5 325 aaPredicted RBP7.78□□□□□ -1.16
AC004542.1-201ENST00000602955 COLQQ9Y215 455 aaPredicted RBP7.78□□□□□ -1.16
AC004542.1-201ENST00000602955 PHF14O94880 888 aa7.77□□□□□ -1.17
AC004542.1-201ENST00000602955 SEC24BO95487 1268 aa7.77□□□□□ -1.17
AC004542.1-201ENST00000602955 CLCN1P35523 988 aa7.77□□□□□ -1.17
AC004542.1-201ENST00000602955 SH3D19Q5HYK7 790 aa7.77□□□□□ -1.17
AC004542.1-201ENST00000602955 REPIN1Q9BWE0 567 aaKnown RBP7.77□□□□□ -1.17
AC004542.1-201ENST00000602955 CDHR5Q9HBB8 845 aa7.76□□□□□ -1.17
AC004542.1-201ENST00000602955 A6NJR5 290 aa7.75□□□□□ -1.17
AC004542.1-201ENST00000602955 PELP1Q8IZL8 1130 aaKnown RBP7.75□□□□□ -1.17
AC004542.1-201ENST00000602955 GPCPD1Q9NPB8 672 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms